Cow genome map
Conread name: | Ss1.1-Pig3-SRG8010C13.3 |
Conread position: | 2-377 |
Cow position: | chrX:13826558-13826183 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 240 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 262, 256 |
Conread position: | 2-436 |
Cow position: | chrX:25324693-25324259 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 277 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 94, 71 |
Conread position: | 3-295 |
Cow position: | chrX:29044953-29044661 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 196 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 74, 85 |
Conread position: | 5-631 |
Cow position: | chrX:29045287-29044661 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 175 |
Conread position: | 5-636 |
Cow position: | chrX:25309947-25310578 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 89 |
Conread position: | 5-714 |
Cow position: | chrX:25324942-25324233 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 99 |
Conread position: | 5-786 |
Cow position: | chrX:25309779-25310560 (view UCSC Genome Browser custom track) |
Alignm length: | 787 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 139 |
Conread position: | 6-826 |
Cow position: | chrX:25325697-25324878 (view UCSC Genome Browser custom track) |
Alignm length: | 824 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 92 |
Conread position: | 7-648 |
Cow position: | chrX:14181583-14180942 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 237 |
Conread position: | 9-370 |
Cow position: | chrX:14181245-14180884 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 232 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-452 |
Cow position: | chrX:14181329-14180887 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 368, 360 |
Conread position: | 9-491 |
Cow position: | chrX:14181413-14180931 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 452, 444 |
Conread position: | 9-637 |
Cow position: | chrX:13826803-13826175 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-783 |
Cow position: | chrX:25325105-25324332 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 155 |
Conread position: | 10-805 |
Cow position: | chrX:25325273-25324478 (view UCSC Genome Browser custom track) |
Alignm length: | 799 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 323 |
Conread position: | 11-470 |
Cow position: | chrX:29045113-29044654 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-660 |
Cow position: | chrX:25324852-25324207 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 157 |
Conread position: | 11-723 |
Cow position: | chrX:25309869-25310581 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 565, 576 |
Conread position: | 11-785 |
Cow position: | chrX:25325020-25324246 (view UCSC Genome Browser custom track) |
Alignm length: | 776 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 664, 657 |
Conread position: | 11-786 |
Cow position: | chrX:25325440-25324665 (view UCSC Genome Browser custom track) |
Alignm length: | 777 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 664, 657 |
Conread position: | 11-809 |
Cow position: | chrX:25325356-25324558 (view UCSC Genome Browser custom track) |
Alignm length: | 800 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 77 |
Conread position: | 11-832 |
Cow position: | chrX:25325188-25324368 (view UCSC Genome Browser custom track) |
Alignm length: | 823 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 349, 345 |
Conread position: | 11-832 |
Cow position: | chrX:25325524-25324704 (view UCSC Genome Browser custom track) |
Alignm length: | 826 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 135 |
Conread position: | 12-715 |
Cow position: | chrX:29045361-29044661 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 26 |
Conread position: | 17-786 |
Cow position: | chrX:25309707-25310476 (view UCSC Genome Browser custom track) |
Alignm length: | 774 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 211 |
Conread position: | 21-780 |
Cow position: | chrX:13826958-13826200 (view UCSC Genome Browser custom track) |
Alignm length: | 766 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 11 |
Conread position: | 29-731 |
Cow position: | chrX:13826867-13826165 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 59 |
Conread position: | 44-732 |
Cow position: | chrX:14181630-14180942 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 141 |
Conread position: | 62-405 |
Cow position: | chrX:29045796-29045454 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 216 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 67-876 |
Cow position: | chrX:25325803-25324995 (view UCSC Genome Browser custom track) |
Alignm length: | 812 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 756, 26 |
Conread position: | 94-790 |
Cow position: | chrX:13826970-13826274 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 23 |
Conread position: | 96-786 |
Cow position: | chrX:29045361-29044674 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 579, 29 |
Conread position: | 101-742 |
Cow position: | chrX:12627340-12627979 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 381 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 48, 67 |
Conread position: | 113-489 |
Cow position: | chrX:29045830-29045454 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 242 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 36, 56 |
Conread position: | 119-786 |
Cow position: | chrX:14181639-14180972 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 183 |
Conread position: | 183-786 |
Cow position: | chrX:25309705-25310308 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 53 |
Conread position: | 229-809 |
Cow position: | chrX:25309667-25310247 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 67 |
Conread position: | 254-573 |
Cow position: | chrX:29045773-29045454 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 201 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 279-657 |
Cow position: | chrX:29045832-29045454 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 242 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 52, 58 |
Conread position: | 287-806 |
Cow position: | chrX:14181639-14181120 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 136 |
Conread position: | 348-797 |
Cow position: | chrX:29045361-29044915 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 281 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 232, 29 |
Conread position: | 367-804 |
Cow position: | chrX:13826949-13826512 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 280 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 61, 49 |
Conread position: | 440-741 |
Cow position: | chrX:29045755-29045454 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 195 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 449-786 |
Cow position: | chrX:29045830-29045493 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 219 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 50, 73 |
Conread position: | 452-876 |
Cow position: | chrX:13826948-13826524 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 265 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 123, 128 |
Conread position: | 484-826 |
Cow position: | chrX:25309670-25310011 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 210 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 178, 182 |
Show alignments to all cow chromosomes.