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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010H17.5
        

               
Conread position:
               
183-387
               

               
Cow position:
               
chr12:44916245-44916042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
189-486
               

               
Cow position:
               
chr12:5940481-5940182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
202-417
               

               
Cow position:
               
chr12:33729525-33729743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chr12:6235398-6235176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
216-495
               

               
Cow position:
               
chr12:45814154-45814436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr12:10895451-10895776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
172, 24
               

               
Conread position:
               
225-370
               

               
Cow position:
               
chr12:23106034-23105891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
225-497
               

               
Cow position:
               
chr12:4162257-4162544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
230-357
               

               
Cow position:
               
chr12:31841663-31841536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-381
               

               
Cow position:
               
chr12:25814247-25814090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
230-511
               

               
Cow position:
               
chr12:10575699-10575409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
231-343
               

               
Cow position:
               
chr12:23912918-23913030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
236-437
               

               
Cow position:
               
chr12:9900237-9900038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 31
               

               
Conread position:
               
236-539
               

               
Cow position:
               
chr12:1284373-1284685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
95, 154
               

               
Conread position:
               
239-540
               

               
Cow position:
               
chr12:35368727-35368415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 238
               

               
Conread position:
               
240-351
               

               
Cow position:
               
chr12:1344828-1344718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
240-485
               

               
Cow position:
               
chr12:2286664-2286420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
241-387
               

               
Cow position:
               
chr12:43782889-43783038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
241-446
               

               
Cow position:
               
chr12:30799009-30799215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
241-540
               

               
Cow position:
               
chr12:19714956-19715256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
242-360
               

               
Cow position:
               
chr12:18996892-18996774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-436
               

               
Cow position:
               
chr12:16341973-16341780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
145, 42
               

               
Conread position:
               
242-489
               

               
Cow position:
               
chr12:19258359-19258111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
242-491
               

               
Cow position:
               
chr12:3623776-3623523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
242-540
               

               
Cow position:
               
chr12:30661870-30662177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 12
               

               
Conread position:
               
242-540
               

               
Cow position:
               
chr12:48415434-48415741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
243-540
               

               
Cow position:
               
chr12:19866323-19866014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
78, 148
               

               
Conread position:
               
244-433
               

               
Cow position:
               
chr12:17671510-17671327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
245-333
               

               
Cow position:
               
chr12:4014354-4014442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-340
               

               
Cow position:
               
chr12:30042804-30042709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-341
               

               
Cow position:
               
chr12:11106502-11106598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-341
               

               
Cow position:
               
chr12:25528481-25528577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-343
               

               
Cow position:
               
chr12:24391398-24391300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-345
               

               
Cow position:
               
chr12:22469591-22469491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-351
               

               
Cow position:
               
chr12:25417492-25417597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
245-353
               

               
Cow position:
               
chr12:14987878-14987766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
245-354
               

               
Cow position:
               
chr12:16434795-16434902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
245-354
               

               
Cow position:
               
chr12:38182572-38182465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
245-355
               

               
Cow position:
               
chr12:18938947-18938837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 43
               

               
Conread position:
               
245-357
               

               
Cow position:
               
chr12:28651192-28651080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-357
               

               
Cow position:
               
chr12:29200315-29200429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
245-357
               

               
Cow position:
               
chr12:37123728-37123616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
245-358
               

               
Cow position:
               
chr12:6958299-6958185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
245-358
               

               
Cow position:
               
chr12:29180754-29180639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr12:25456489-25456372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr12:39149973-39150088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
245-363
               

               
Cow position:
               
chr12:2964126-2964011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
245-365
               

               
Cow position:
               
chr12:42143238-42143119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
245-365
               

               
Cow position:
               
chr12:43860583-43860704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
245-366
               

               
Cow position:
               
chr12:6226068-6226186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
245-366
               

               
Cow position:
               
chr12:26357293-26357411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
245-368
               

               
Cow position:
               
chr12:3586197-3586074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-369
               

               
Cow position:
               
chr12:14986827-14986704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
245-370
               

               
Cow position:
               
chr12:23714754-23714628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
245-371
               

               
Cow position:
               
chr12:26868735-26868860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
245-373
               

               
Cow position:
               
chr12:22894248-22894121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
245-373
               

               
Cow position:
               
chr12:43474839-43474711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr12:1766988-1766862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-375
               

               
Cow position:
               
chr12:12532413-12532542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
245-375
               

               
Cow position:
               
chr12:25441720-25441589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
245-376
               

               
Cow position:
               
chr12:22859542-22859416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
245-376
               

               
Cow position:
               
chr12:26147091-26147221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
245-376
               

               
Cow position:
               
chr12:43854972-43854843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
245-379
               

               
Cow position:
               
chr12:9439373-9439506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
245-381
               

               
Cow position:
               
chr12:12912858-12912994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
245-381
               

               
Cow position:
               
chr12:48578921-48578784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
245-383
               

               
Cow position:
               
chr12:1701726-1701864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-384
               

               
Cow position:
               
chr12:32419295-32419431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
245-384
               

               
Cow position:
               
chr12:40269987-40270122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
245-385
               

               
Cow position:
               
chr12:3675450-3675588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
245-386
               

               
Cow position:
               
chr12:38154992-38155133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
245-387
               

               
Cow position:
               
chr12:6139498-6139644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
245-387
               

               
Cow position:
               
chr12:13911494-13911644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
245-388
               

               
Cow position:
               
chr12:24166865-24167008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-388
               

               
Cow position:
               
chr12:44901337-44901197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr12:4594584-4594436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr12:34195631-34195772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr12:45001989-45002132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
245-390
               

               
Cow position:
               
chr12:33948983-33948838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr12:4793276-4793130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr12:7920321-7920175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr12:24181225-24181082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr12:36994037-36994183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr12:45069305-45069455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr12:5839576-5839724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr12:29966181-29966039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr12:45167941-45168087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
245-396
               

               
Cow position:
               
chr12:6484216-6484067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 82
               

               
Conread position:
               
245-398
               

               
Cow position:
               
chr12:40881839-40881984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
245-402
               

               
Cow position:
               
chr12:7457466-7457619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
245-403
               

               
Cow position:
               
chr12:17252120-17252278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
149, 98
               

               
Conread position:
               
245-405
               

               
Cow position:
               
chr12:26151381-26151542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
245-408
               

               
Cow position:
               
chr12:40157946-40158103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
245-413
               

               
Cow position:
               
chr12:26777112-26777281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
149, 67
               

               
Conread position:
               
245-423
               

               
Cow position:
               
chr12:37514203-37514382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr12:3879901-3880083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
143, 166
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr12:16147568-16147382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 124
               

               
Conread position:
               
245-431
               

               
Cow position:
               
chr12:5609433-5609618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
245-432
               

               
Cow position:
               
chr12:42286050-42285860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
245-433
               

               
Cow position:
               
chr12:11660000-11659816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
245-433
               

               
Cow position:
               
chr12:23939296-23939114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
245-434
               

               
Cow position:
               
chr12:18582914-18583103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
153, 78
               

               
Conread position:
               
245-434
               

               
Cow position:
               
chr12:35241027-35241213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
245-436
               

               
Cow position:
               
chr12:3371467-3371656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
149, 72
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr12:26749873-26750077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
245-445
               

               
Cow position:
               
chr12:35652793-35652981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 9
               

               
Conread position:
               
245-447
               

               
Cow position:
               
chr12:16056779-16056983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
245-447
               

               
Cow position:
               
chr12:19261274-19261075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
148, 174
               

               
Conread position:
               
245-447
               

               
Cow position:
               
chr12:24222442-24222641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 140
               

               
Conread position:
               
245-447
               

               
Cow position:
               
chr12:37814545-37814747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
245-450
               

               
Cow position:
               
chr12:15429520-15429721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
245-451
               

               
Cow position:
               
chr12:17269881-17269672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
245-453
               

               
Cow position:
               
chr12:18523648-18523435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
83, 197
               

               
Conread position:
               
245-453
               

               
Cow position:
               
chr12:37008628-37008833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
146, 77
               

               
Conread position:
               
245-455
               

               
Cow position:
               
chr12:22485885-22485688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr12:15173902-15173693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr12:15700159-15699942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr12:29675063-29675269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
150, 120
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr12:34165661-34165455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr12:44733013-44733223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
101, 97
               

               
Conread position:
               
245-458
               

               
Cow position:
               
chr12:25193117-25192919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
245-458
               

               
Cow position:
               
chr12:45090273-45090492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
245-466
               

               
Cow position:
               
chr12:9766798-9767020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
148, 202
               

               
Conread position:
               
245-470
               

               
Cow position:
               
chr12:19400742-19400960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr12:13988448-13988216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
203, 139
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr12:23446799-23446567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
151, 90
               

               
Conread position:
               
245-476
               

               
Cow position:
               
chr12:46714448-46714217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr12:4866896-4866665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 139
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr12:38126445-38126676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 136
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr12:42099780-42100010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr12:46120752-46120987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 151
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr12:3599681-3599915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr12:37169866-37170105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
7, 159
               

               
Conread position:
               
245-485
               

               
Cow position:
               
chr12:7902721-7902965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
245-485
               

               
Cow position:
               
chr12:25188267-25188023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr12:42784391-42784142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
245-487
               

               
Cow position:
               
chr12:32051587-32051345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr12:37993653-37993894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 144
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr12:47929279-47929043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
191, 65
               

               
Conread position:
               
245-494
               

               
Cow position:
               
chr12:24663192-24662944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr12:6485133-6485382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr12:25177519-25177758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
208, 92
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr12:36544563-36544824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr12:42163117-42162862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:3950267-3950524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:6720406-6720146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:7884602-7884847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
143, 204
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:11056953-11056703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:11587853-11587590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 179
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:15089594-15089337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:17080345-17080083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 186
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:23916921-23916665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 87
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:35123968-35123715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:36012551-36012788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
144, 63
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr12:45820287-45820536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 210
               

               
Conread position:
               
245-506
               

               
Cow position:
               
chr12:23798178-23797922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 78
               

               
Conread position:
               
245-517
               

               
Cow position:
               
chr12:37728223-37727940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
99, 83
               

               
Conread position:
               
245-521
               

               
Cow position:
               
chr12:15122405-15122122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 237
               

               
Conread position:
               
245-529
               

               
Cow position:
               
chr12:41159666-41159382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 82
               

               
Conread position:
               
245-530
               

               
Cow position:
               
chr12:7000526-7000815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
245-536
               

               
Cow position:
               
chr12:37770947-37770651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr12:18103533-18103821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
153, 106
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr12:19697476-19697189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr12:25805054-25805337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:1889499-1889808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
152, 122
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:4341665-4341948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 144
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:5635374-5635676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 140
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:6210078-6210385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 153
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:6241398-6241081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 181
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:6410655-6410956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 153
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:9143466-9143165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
148, 131
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:9914868-9914563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 284
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:15240657-15240952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:15938191-15938495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:17001337-17001030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
148, 131
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:17031694-17031393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:17774873-17774577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:17881940-17881638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 171
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:18123748-18123458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
242, 134
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:18420853-18421155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:18518752-18518443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 206
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:18943579-18943872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 151
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:20479259-20479542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 82
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:23574842-23574542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 172
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:24023723-24024020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 144
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:25561448-25561142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 77
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:27037371-27037677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 200
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:29779835-29780130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
226, 140
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:30605087-30605384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:30805937-30805630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 157
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:31532325-31532632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:31959958-31959666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 90
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:35310606-35310901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:40910207-40910519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:41474168-41473867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 172
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:41581190-41580884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:42181050-42181369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 240
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:42254745-42254430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 9
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:42698167-42698451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
211, 81
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:42879773-42879478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:42967073-42966772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 15
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:44517659-44517964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 152
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr12:44595731-44596042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 232
               

               
Conread position:
               
246-342
               

               
Cow position:
               
chr12:18092550-18092454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-349
               

               
Cow position:
               
chr12:20439179-20439282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-375
               

               
Cow position:
               
chr12:45039188-45039056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
246-383
               

               
Cow position:
               
chr12:2734830-2734966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
246-388
               

               
Cow position:
               
chr12:44693291-44693151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
246-389
               

               
Cow position:
               
chr12:45092524-45092381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-391
               

               
Cow position:
               
chr12:6754274-6754129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-394
               

               
Cow position:
               
chr12:8859256-8859106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
246-395
               

               
Cow position:
               
chr12:5135310-5135162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
246-395
               

               
Cow position:
               
chr12:46463992-46464138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
246-422
               

               
Cow position:
               
chr12:24043087-24043266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
246-434
               

               
Cow position:
               
chr12:31269232-31269040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
246-447
               

               
Cow position:
               
chr12:14223059-14222853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
148, 124
               

               
Conread position:
               
246-451
               

               
Cow position:
               
chr12:24116285-24116490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
141, 118
               

               
Conread position:
               
246-458
               

               
Cow position:
               
chr12:4821039-4820822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 156
               

               
Conread position:
               
246-458
               

               
Cow position:
               
chr12:26575973-26575752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
246-468
               

               
Cow position:
               
chr12:36790734-36790959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
164, 132
               

               
Conread position:
               
246-476
               

               
Cow position:
               
chr12:5631804-5632032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
147, 74
               

               
Conread position:
               
246-476
               

               
Cow position:
               
chr12:42234137-42233903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr12:4596542-4596308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr12:14524006-14523788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
246-482
               

               
Cow position:
               
chr12:15103352-15103103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
246-496
               

               
Cow position:
               
chr12:33323417-33323671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr12:7978115-7977865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 86
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr12:12637110-12637365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr12:22341324-22341081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 128
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chr12:22540285-22540011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
246-515
               

               
Cow position:
               
chr12:30194779-30194505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
147, 102
               

               
Conread position:
               
246-516
               

               
Cow position:
               
chr12:1031057-1030785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
147, 76
               

               
Conread position:
               
246-523
               

               
Cow position:
               
chr12:21044989-21045273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
246-531
               

               
Cow position:
               
chr12:34465926-34466226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
246-534
               

               
Cow position:
               
chr12:46333422-46333138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:5714704-5714400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:9229422-9229710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
209, 143
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:11109832-11109541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:14131692-14131972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:18388213-18388510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:18572700-18572413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
152, 9
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:25320992-25320695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
211, 86
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:28582432-28582720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 27
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:30438314-30438022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 11
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:34007378-34007071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
209, 15
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:34473547-34473843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
146, 63
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr12:36500869-36501180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 155
               

               
Conread position:
               
247-359
               

               
Cow position:
               
chr12:27430584-27430471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
247-366
               

               
Cow position:
               
chr12:27572163-27572282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-370
               

               
Cow position:
               
chr12:5543719-5543839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
247-371
               

               
Cow position:
               
chr12:24437558-24437682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-374
               

               
Cow position:
               
chr12:25355679-25355804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
247-383
               

               
Cow position:
               
chr12:43354051-43354182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
247-388
               

               
Cow position:
               
chr12:17487035-17486903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
247-390
               

               
Cow position:
               
chr12:9129985-9129843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
247-391
               

               
Cow position:
               
chr12:32753591-32753446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
247-392
               

               
Cow position:
               
chr12:15495976-15495830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
247-402
               

               
Cow position:
               
chr12:9514438-9514283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-413
               

               
Cow position:
               
chr12:5554257-5554425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
247-416
               

               
Cow position:
               
chr12:42749515-42749348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
247-430
               

               
Cow position:
               
chr12:33319590-33319774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 133
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr12:3371781-3371991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr12:7110274-7110068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr12:25809506-25809294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
247-466
               

               
Cow position:
               
chr12:9147017-9146808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
247-467
               

               
Cow position:
               
chr12:10942364-10942142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr12:24032574-24032350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
247-472
               

               
Cow position:
               
chr12:27621957-27622191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
247-477
               

               
Cow position:
               
chr12:34333186-34332956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr12:6242102-6242341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr12:15050548-15050783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
247-495
               

               
Cow position:
               
chr12:30210560-30210307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 168
               

               
Conread position:
               
247-495
               

               
Cow position:
               
chr12:44920107-44919859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr12:4720024-4719768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 173
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr12:4769001-4768749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr12:21486653-21486407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr12:33851434-33851182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 85
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr12:38774165-38774417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 130
               

               
Conread position:
               
247-498
               

               
Cow position:
               
chr12:15358416-15358154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
247-501
               

               
Cow position:
               
chr12:42602167-42602418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
241, 24
               

               
Conread position:
               
247-511
               

               
Cow position:
               
chr12:25989134-25989386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
247-533
               

               
Cow position:
               
chr12:28256978-28257275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
247-533
               

               
Cow position:
               
chr12:31948189-31947902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr12:15163216-15162922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 94
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr12:27562765-27563065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr12:29770502-29770801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 76
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr12:42282759-42283065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
248-364
               

               
Cow position:
               
chr12:29731390-29731274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
248-420
               

               
Cow position:
               
chr12:40200773-40200607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
248-434
               

               
Cow position:
               
chr12:11700803-11700995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
248-452
               

               
Cow position:
               
chr12:4954902-4954702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
248-462
               

               
Cow position:
               
chr12:44202911-44203125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
248-477
               

               
Cow position:
               
chr12:45680353-45680125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
175, 141
               

               
Conread position:
               
248-496
               

               
Cow position:
               
chr12:15703422-15703673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
248-497
               

               
Cow position:
               
chr12:2813303-2813049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 184
               

               
Conread position:
               
248-497
               

               
Cow position:
               
chr12:40807480-40807223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 197
               

               
Conread position:
               
248-499
               

               
Cow position:
               
chr12:24559434-24559178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 193
               

               
Conread position:
               
248-501
               

               
Cow position:
               
chr12:31530369-31530107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
249-351
               

               
Cow position:
               
chr12:6666645-6666547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
249-356
               

               
Cow position:
               
chr12:38804515-38804622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-357
               

               
Cow position:
               
chr12:24397089-24397196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
249-357
               

               
Cow position:
               
chr12:44559925-44559817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-360
               

               
Cow position:
               
chr12:20355290-20355177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
249-381
               

               
Cow position:
               
chr12:45723387-45723260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
249-382
               

               
Cow position:
               
chr12:44542341-44542206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
249-384
               

               
Cow position:
               
chr12:7311456-7311320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
249-385
               

               
Cow position:
               
chr12:45014757-45014618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
249-386
               

               
Cow position:
               
chr12:27357462-27357326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
249-389
               

               
Cow position:
               
chr12:15260837-15260698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
249-391
               

               
Cow position:
               
chr12:19274324-19274464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
249-392
               

               
Cow position:
               
chr12:29057465-29057321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
249-392
               

               
Cow position:
               
chr12:39663125-39663268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-397
               

               
Cow position:
               
chr12:28885004-28885153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
249-401
               

               
Cow position:
               
chr12:37256088-37255944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
249-404
               

               
Cow position:
               
chr12:23644728-23644887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
249-404
               

               
Cow position:
               
chr12:47267234-47267387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
249-414
               

               
Cow position:
               
chr12:3616072-3615910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
145, 94
               

               
Conread position:
               
249-416
               

               
Cow position:
               
chr12:7854135-7854299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
249-417
               

               
Cow position:
               
chr12:6687966-6687798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
142, 18
               

               
Conread position:
               
249-419
               

               
Cow position:
               
chr12:31883412-31883249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
249-426
               

               
Cow position:
               
chr12:5680758-5680578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
249-443
               

               
Cow position:
               
chr12:21780237-21780045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr12:7299384-7299593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr12:38851952-38852162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
249-472
               

               
Cow position:
               
chr12:26217749-26217978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
249-474
               

               
Cow position:
               
chr12:38184667-38184443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
206, 9
               

               
Conread position:
               
249-477
               

               
Cow position:
               
chr12:3197343-3197119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
249-477
               

               
Cow position:
               
chr12:25027685-25027929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
249-478
               

               
Cow position:
               
chr12:31517096-31517325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 196
               

               
Conread position:
               
249-479
               

               
Cow position:
               
chr12:1333304-1333076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
249-481
               

               
Cow position:
               
chr12:23836404-23836164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
145, 77
               

               
Conread position:
               
249-482
               

               
Cow position:
               
chr12:41215810-41216045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
141, 83
               

               
Conread position:
               
249-486
               

               
Cow position:
               
chr12:1773586-1773833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
249-486
               

               
Cow position:
               
chr12:11836309-11836068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 228
               

               
Conread position:
               
249-486
               

               
Cow position:
               
chr12:13643306-13643071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
249-492
               

               
Cow position:
               
chr12:17879227-17879475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
249-494
               

               
Cow position:
               
chr12:19507712-19507458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 225
               

               
Conread position:
               
249-494
               

               
Cow position:
               
chr12:27366001-27365752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
249-496
               

               
Cow position:
               
chr12:4008208-4008453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
249-496
               

               
Cow position:
               
chr12:9482231-9482474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr12:12331435-12331680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 112
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr12:27802975-27803223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 170
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr12:30065010-30064770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr12:39465654-39465405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
143, 189
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr12:15414793-15415051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr12:27055680-27055432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
249-500
               

               
Cow position:
               
chr12:22882130-22881871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
249-509
               

               
Cow position:
               
chr12:42684870-42685140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
145, 229
               

               
Conread position:
               
249-516
               

               
Cow position:
               
chr12:33976274-33976004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 148
               

               
Conread position:
               
249-516
               

               
Cow position:
               
chr12:35779848-35780118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
249-517
               

               
Cow position:
               
chr12:37732705-37732984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
249-520
               

               
Cow position:
               
chr12:25606781-25606508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 227
               

               
Conread position:
               
249-528
               

               
Cow position:
               
chr12:31198842-31198550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
144, 153
               

               
Conread position:
               
249-537
               

               
Cow position:
               
chr12:25280427-25280714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
146, 197
               

               
Conread position:
               
249-539
               

               
Cow position:
               
chr12:46314629-46314920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:730864-731163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:18765898-18766209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 231
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:18768996-18769302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:19691159-19691464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 78
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:21393782-21393477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:21922525-21922207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
143, 102
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:22515660-22515968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:27563302-27563615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 169
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:30590842-30590548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 143
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:31429496-31429789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 95
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:34161488-34161189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 102
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr12:47804231-47803927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
250-343
               

               
Cow position:
               
chr12:32391990-32391899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
250-350
               

               
Cow position:
               
chr12:17273506-17273406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-380
               

               
Cow position:
               
chr12:43520130-43520006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
250-389
               

               
Cow position:
               
chr12:4797374-4797235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-411
               

               
Cow position:
               
chr12:4135151-4134990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-455
               

               
Cow position:
               
chr12:24152414-24152206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
25, 139
               

               
Conread position:
               
250-477
               

               
Cow position:
               
chr12:35770947-35771176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 147
               

               
Conread position:
               
250-496
               

               
Cow position:
               
chr12:7960510-7960753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
250-497
               

               
Cow position:
               
chr12:20776850-20777099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
250-497
               

               
Cow position:
               
chr12:25444988-25444748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
206, 126
               

               
Conread position:
               
250-497
               

               
Cow position:
               
chr12:29969653-29969403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 149
               

               
Conread position:
               
250-522
               

               
Cow position:
               
chr12:12300992-12300717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
250-538
               

               
Cow position:
               
chr12:30753793-30753496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 73
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr12:5906130-5905829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 280
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr12:24211481-24211188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 90
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr12:28213583-28213290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
207, 53
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr12:29483812-29484118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
135, 160
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr12:30919499-30919204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 257
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr12:35669400-35669694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
251-359
               

               
Cow position:
               
chr12:23734458-23734350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-359
               

               
Cow position:
               
chr12:30226860-30226968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-364
               

               
Cow position:
               
chr12:26787862-26787749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
251-434
               

               
Cow position:
               
chr12:47193951-47194132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
251-454
               

               
Cow position:
               
chr12:10763330-10763134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr12:19869533-19869249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
204, 16
               

               
Conread position:
               
251-536
               

               
Cow position:
               
chr12:44622421-44622135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 74
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr12:2711571-2711264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 85
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr12:8943151-8943449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 125
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr12:12304453-12304171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 77
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr12:19502355-19502648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
237, 138
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr12:31228644-31228346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 21
               

               
Conread position:
               
252-497
               

               
Cow position:
               
chr12:23855904-23855658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
252-498
               

               
Cow position:
               
chr12:25340601-25340335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
253-369
               

               
Cow position:
               
chr12:46103635-46103751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
253-483
               

               
Cow position:
               
chr12:22125119-22124884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
254-446
               

               
Cow position:
               
chr12:4193898-4193706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
133, 186
               

               
Conread position:
               
254-482
               

               
Cow position:
               
chr12:24577182-24577411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
254-496
               

               
Cow position:
               
chr12:36119035-36118798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
142, 156
               

               
Conread position:
               
254-525
               

               
Cow position:
               
chr12:43942551-43942271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 200
               

               
Conread position:
               
254-539
               

               
Cow position:
               
chr12:15762844-15763137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
255-360
               

               
Cow position:
               
chr12:43551151-43551258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
255-368
               

               
Cow position:
               
chr12:9413739-9413852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-374
               

               
Cow position:
               
chr12:36261758-36261639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-396
               

               
Cow position:
               
chr12:24273288-24273431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
255-418
               

               
Cow position:
               
chr12:30819313-30819147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
255-456
               

               
Cow position:
               
chr12:16670335-16670133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
255-493
               

               
Cow position:
               
chr12:32169609-32169367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 87
               

               
Conread position:
               
255-496
               

               
Cow position:
               
chr12:33129323-33129092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
233, 99
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr12:15531123-15530881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr12:18020926-18020681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
132, 65
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr12:30745785-30745539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
255-539
               

               
Cow position:
               
chr12:32715113-32714815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr12:6488924-6489205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr12:26222920-26223212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr12:29995395-29995689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 89
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr12:30170737-30170439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr12:40110440-40110161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
170, 80
               

               
Conread position:
               
256-360
               

               
Cow position:
               
chr12:6480708-6480604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr12:22285053-22285329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
257-374
               

               
Cow position:
               
chr12:45783649-45783766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-387
               

               
Cow position:
               
chr12:15389138-15389008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-400
               

               
Cow position:
               
chr12:15641040-15641184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
257-434
               

               
Cow position:
               
chr12:6468993-6469173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
257-477
               

               
Cow position:
               
chr12:42174483-42174263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
177, 72
               

               
Conread position:
               
257-486
               

               
Cow position:
               
chr12:5801110-5800869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr12:33458214-33457968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr12:18577907-18577621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 181
               

               
Conread position:
               
258-496
               

               
Cow position:
               
chr12:3756981-3757215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
258-498
               

               
Cow position:
               
chr12:30578386-30578633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
259-390
               

               
Cow position:
               
chr12:6188049-6188180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
259-538
               

               
Cow position:
               
chr12:17717127-17716857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr12:12578967-12579253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr12:38454969-38454690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
229, 38
               

               
Conread position:
               
260-357
               

               
Cow position:
               
chr12:44028574-44028479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
260-497
               

               
Cow position:
               
chr12:8868818-8869054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 68
               

               
Conread position:
               
260-516
               

               
Cow position:
               
chr12:18963864-18964126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 125
               

               
Conread position:
               
260-540
               

               
Cow position:
               
chr12:44905691-44905412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
207, 65
               

               
Conread position:
               
261-474
               

               
Cow position:
               
chr12:35378264-35378047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
261-496
               

               
Cow position:
               
chr12:25110378-25110612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr12:3510616-3510335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
262-381
               

               
Cow position:
               
chr12:43691354-43691473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
263-498
               

               
Cow position:
               
chr12:28559355-28559121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
263-511
               

               
Cow position:
               
chr12:10491332-10491077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
264-486
               

               
Cow position:
               
chr12:15230757-15230980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
266-473
               

               
Cow position:
               
chr12:25452389-25452600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
266-540
               

               
Cow position:
               
chr12:16543522-16543797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
268-486
               

               
Cow position:
               
chr12:9894838-9894617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
187, 132
               

               
Conread position:
               
268-516
               

               
Cow position:
               
chr12:19664476-19664727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 108
               

               
Conread position:
               
269-369
               

               
Cow position:
               
chr12:19512970-19513070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-377
               

               
Cow position:
               
chr12:28732085-28731976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
269-406
               

               
Cow position:
               
chr12:30999282-30999146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 128
               

               
Conread position:
               
272-433
               

               
Cow position:
               
chr12:30413895-30414057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
274-497
               

               
Cow position:
               
chr12:34673290-34673517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 140
               

               
Conread position:
               
275-480
               

               
Cow position:
               
chr12:5658028-5658229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
183, 116
               

               
Conread position:
               
275-498
               

               
Cow position:
               
chr12:30596517-30596289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
279-393
               

               
Cow position:
               
chr12:30946788-30946674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-540
               

               
Cow position:
               
chr12:42953855-42954122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
280-419
               

               
Cow position:
               
chr12:17478998-17479138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
280-420
               

               
Cow position:
               
chr12:42307372-42307513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
280-456
               

               
Cow position:
               
chr12:41658681-41658855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr12:6102784-6102991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
280-483
               

               
Cow position:
               
chr12:15038932-15039138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
178, 203
               

               
Conread position:
               
280-486
               

               
Cow position:
               
chr12:30803937-30804141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
175, 92
               

               
Conread position:
               
280-492
               

               
Cow position:
               
chr12:20071529-20071750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
280-494
               

               
Cow position:
               
chr12:20636108-20636333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr12:19508515-19508744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr12:42160515-42160725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
180, 94
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr12:45363405-45363185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
108, 167
               

               
Conread position:
               
280-498
               

               
Cow position:
               
chr12:1998757-1998978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
280-523
               

               
Cow position:
               
chr12:9710164-9710419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
95, 126
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr12:15783965-15783705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 82
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr12:28748985-28748706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
282-455
               

               
Cow position:
               
chr12:21911851-21911671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
282-540
               

               
Cow position:
               
chr12:3906515-3906240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 58
               

               
Conread position:
               
285-433
               

               
Cow position:
               
chr12:25530115-25529973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr12:18420506-18420309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
286-496
               

               
Cow position:
               
chr12:34819091-34819317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 202
               

               
Conread position:
               
286-540
               

               
Cow position:
               
chr12:28471685-28471411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 198
               

               
Conread position:
               
287-483
               

               
Cow position:
               
chr12:33298219-33298027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
119, 75
               

               
Conread position:
               
287-486
               

               
Cow position:
               
chr12:40360724-40360522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
287-540
               

               
Cow position:
               
chr12:7205590-7205833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 58
               

               
Conread position:
               
287-540
               

               
Cow position:
               
chr12:18550918-18550663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
289-391
               

               
Cow position:
               
chr12:39675462-39675564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-452
               

               
Cow position:
               
chr12:37137495-37137651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
295-497
               

               
Cow position:
               
chr12:20326803-20326597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
297-486
               

               
Cow position:
               
chr12:45160492-45160672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
177, 107
               

               
Conread position:
               
297-496
               

               
Cow position:
               
chr12:43476375-43476183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
297-497
               

               
Cow position:
               
chr12:41091560-41091356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 129
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr12:3056159-3055909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr12:36313879-36313637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
191, 92
               

               
Conread position:
               
298-540
               

               
Cow position:
               
chr12:40028728-40028983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
299-540
               

               
Cow position:
               
chr12:22287298-22287051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
300-452
               

               
Cow position:
               
chr12:41596843-41596687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
302-506
               

               
Cow position:
               
chr12:7557897-7558094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
186, 49
               

               
Conread position:
               
303-540
               

               
Cow position:
               
chr12:17624804-17625046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
85, 146
               

               
Conread position:
               
304-540
               

               
Cow position:
               
chr12:12178943-12178693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
307-540
               

               
Cow position:
               
chr12:941657-941404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
308-540
               

               
Cow position:
               
chr12:26317481-26317238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
309-508
               

               
Cow position:
               
chr12:37190330-37190130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
309-527
               

               
Cow position:
               
chr12:6164007-6164235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
79, 170
               

               
Conread position:
               
312-496
               

               
Cow position:
               
chr12:34385499-34385690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
313-456
               

               
Cow position:
               
chr12:13996010-13996153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
313-512
               

               
Cow position:
               
chr12:29921774-29921976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
147, 84
               

               
Conread position:
               
316-540
               

               
Cow position:
               
chr12:1343102-1343331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
317-540
               

               
Cow position:
               
chr12:45065828-45065606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
319-540
               

               
Cow position:
               
chr12:34429151-34429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
169, 78
               

               
Conread position:
               
320-481
               

               
Cow position:
               
chr12:24250209-24250369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
320-497
               

               
Cow position:
               
chr12:44013836-44014013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr12:12030828-12031062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 213
               

               
Conread position:
               
326-497
               

               
Cow position:
               
chr12:24107547-24107715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 73
               

               
Conread position:
               
335-461
               

               
Cow position:
               
chr12:31603505-31603630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
335-486
               

               
Cow position:
               
chr12:2670255-2670098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
335-540
               

               
Cow position:
               
chr12:28572676-28572474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 79
               

               
Conread position:
               
335-540
               

               
Cow position:
               
chr12:43582764-43582550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
338-540
               

               
Cow position:
               
chr12:11583376-11583173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
339-516
               

               
Cow position:
               
chr12:44846371-44846191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
339-527
               

               
Cow position:
               
chr12:4714347-4714160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
339-527
               

               
Cow position:
               
chr12:30476467-30476271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
339-533
               

               
Cow position:
               
chr12:4116474-4116276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
339-540
               

               
Cow position:
               
chr12:2241904-2242113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
339-540
               

               
Cow position:
               
chr12:24032990-24032778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
341-497
               

               
Cow position:
               
chr12:37536507-37536666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
345-537
               

               
Cow position:
               
chr12:38511857-38512067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 192
               

               
Conread position:
               
346-486
               

               
Cow position:
               
chr12:20354954-20354804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
346-496
               

               
Cow position:
               
chr12:4182713-4182867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
346-497
               

               
Cow position:
               
chr12:25456097-25455941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr12:22047448-22047241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr12:25820452-25820661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr12:28650935-28650724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
349-537
               

               
Cow position:
               
chr12:18021567-18021368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr12:41214346-41214550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
351-540
               

               
Cow position:
               
chr12:17702253-17702461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
352-540
               

               
Cow position:
               
chr12:32391820-32391617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
353-496
               

               
Cow position:
               
chr12:46692704-46692561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
355-539
               

               
Cow position:
               
chr12:46143791-46143594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
359-497
               

               
Cow position:
               
chr12:7191297-7191439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
359-537
               

               
Cow position:
               
chr12:44559553-44559361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
362-540
               

               
Cow position:
               
chr12:6226690-6226875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
376-530
               

               
Cow position:
               
chr12:2805101-2805258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
392-540
               

               
Cow position:
               
chr12:40270160-40270314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
393-540
               

               
Cow position:
               
chr12:36568129-36568285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
398-540
               

               
Cow position:
               
chr12:9413856-9413996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 94
               
Show alignments to all cow chromosomes.