Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8010H17.5
        

               Conread position:
               183-451
               

               Cow position:
               chr13:8401862-8402130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               183-540
               

               Cow position:
               chr13:47356459-47356802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               184-340
               

               Cow position:
               chr13:20798033-20797879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               201-497
               

               Cow position:
               chr13:49520998-49520698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               142, 164
               

               Conread position:
               206-378
               

               Cow position:
               chr13:43794387-43794555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               218-486
               

               Cow position:
               chr13:57002568-57002840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               172, 53
               

               Conread position:
               219-357
               

               Cow position:
               chr13:11715507-11715645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               221-327
               

               Cow position:
               chr13:20529625-20529517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               221-391
               

               Cow position:
               chr13:15069800-15069971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 109
               

               Conread position:
               222-433
               

               Cow position:
               chr13:45108572-45108356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               225-540
               

               Cow position:
               chr13:19033407-19033721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               227, 30
               

               Conread position:
               227-480
               

               Cow position:
               chr13:8362892-8362649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               159, 18
               

               Conread position:
               228-389
               

               Cow position:
               chr13:48465984-48465824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               228-490
               

               Cow position:
               chr13:17110077-17110327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 86
               

               Conread position:
               228-497
               

               Cow position:
               chr13:39826409-39826677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               230-391
               

               Cow position:
               chr13:25941409-25941250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               230-434
               

               Cow position:
               chr13:20401132-20400935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               161, 49
               

               Conread position:
               230-445
               

               Cow position:
               chr13:17563593-17563804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               230-497
               

               Cow position:
               chr13:6087039-6086780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               115, 54
               

               Conread position:
               230-498
               

               Cow position:
               chr13:12408434-12408162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               129, 28
               

               Conread position:
               230-538
               

               Cow position:
               chr13:20684278-20683948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 256
               

               Conread position:
               230-540
               

               Cow position:
               chr13:16014664-16014982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 188
               

               Conread position:
               230-540
               

               Cow position:
               chr13:43595250-43594940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 63
               

               Conread position:
               232-486
               

               Cow position:
               chr13:21668553-21668800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               234-497
               

               Cow position:
               chr13:19188159-19188425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               236-497
               

               Cow position:
               chr13:20174601-20174874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               109, 9
               

               Conread position:
               237-357
               

               Cow position:
               chr13:20826864-20826743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               238-392
               

               Cow position:
               chr13:2776150-2776303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               238-429
               

               Cow position:
               chr13:53788246-53788053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               153, 11
               

               Conread position:
               238-454
               

               Cow position:
               chr13:33955163-33954953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               239-495
               

               Cow position:
               chr13:55674346-55674087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 168
               

               Conread position:
               240-486
               

               Cow position:
               chr13:30258715-30258958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 31
               

               Conread position:
               241-354
               

               Cow position:
               chr13:369257-369146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               241-369
               

               Cow position:
               chr13:29707517-29707645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               241-392
               

               Cow position:
               chr13:9161782-9161937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 147
               

               Conread position:
               241-445
               

               Cow position:
               chr13:60651041-60650835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               150, 133
               

               Conread position:
               241-477
               

               Cow position:
               chr13:8555330-8555562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               214, 14
               

               Conread position:
               241-477
               

               Cow position:
               chr13:46515925-46516164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               172, 156
               

               Conread position:
               241-506
               

               Cow position:
               chr13:18999400-18999668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               241-535
               

               Cow position:
               chr13:9800388-9800669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               78, 5
               

               Conread position:
               242-357
               

               Cow position:
               chr13:37517310-37517197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               242-458
               

               Cow position:
               chr13:6264666-6264873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               242-458
               

               Cow position:
               chr13:18005538-18005753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               131, 119
               

               Conread position:
               242-496
               

               Cow position:
               chr13:49823892-49824146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               130, 83
               

               Conread position:
               242-497
               

               Cow position:
               chr13:15868979-15869245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               72, 149
               

               Conread position:
               242-497
               

               Cow position:
               chr13:55583063-55583320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               242-518
               

               Cow position:
               chr13:20360144-20360418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               246, 156
               

               Conread position:
               242-540
               

               Cow position:
               chr13:12547043-12546730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 161
               

               Conread position:
               243-477
               

               Cow position:
               chr13:6930781-6931016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               205, 133
               

               Conread position:
               243-477
               

               Cow position:
               chr13:49457551-49457775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               214, 11
               

               Conread position:
               244-381
               

               Cow position:
               chr13:54652455-54652325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               244-405
               

               Cow position:
               chr13:84444-84605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               244-421
               

               Cow position:
               chr13:1242582-1242412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               147, 23
               

               Conread position:
               244-451
               

               Cow position:
               chr13:19610697-19610491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               146, 83
               

               Conread position:
               244-484
               

               Cow position:
               chr13:17569233-17568990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               154, 17
               

               Conread position:
               244-486
               

               Cow position:
               chr13:56677882-56678127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 70
               

               Conread position:
               244-497
               

               Cow position:
               chr13:25380828-25381086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 147
               

               Conread position:
               244-498
               

               Cow position:
               chr13:17159011-17158750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 226
               

               Conread position:
               244-540
               

               Cow position:
               chr13:20650115-20649808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               244-540
               

               Cow position:
               chr13:48037490-48037795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 83
               

               Conread position:
               245-325
               

               Cow position:
               chr13:15010076-15010156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               73
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-326
               

               Cow position:
               chr13:6267120-6267201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-326
               

               Cow position:
               chr13:37979707-37979626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-331
               

               Cow position:
               chr13:19467469-19467384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               77
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               245-332
               

               Cow position:
               chr13:17619760-17619847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-333
               

               Cow position:
               chr13:55713568-55713480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-338
               

               Cow position:
               chr13:18701240-18701333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-339
               

               Cow position:
               chr13:41616178-41616086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               245-339
               

               Cow position:
               chr13:49626224-49626319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               245-340
               

               Cow position:
               chr13:38702760-38702666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               245-341
               

               Cow position:
               chr13:15808636-15808730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               245-341
               

               Cow position:
               chr13:28652609-28652705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-341
               

               Cow position:
               chr13:47643928-47644028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               245-348
               

               Cow position:
               chr13:25521047-25520944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-348
               

               Cow position:
               chr13:27198776-27198878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               245-349
               

               Cow position:
               chr13:32363312-32363208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-351
               

               Cow position:
               chr13:6113658-6113552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-351
               

               Cow position:
               chr13:6975977-6975871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-351
               

               Cow position:
               chr13:8393029-8392923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-351
               

               Cow position:
               chr13:16163450-16163556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-351
               

               Cow position:
               chr13:29631476-29631582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-353
               

               Cow position:
               chr13:37555005-37554898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               245-354
               

               Cow position:
               chr13:16790077-16790186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-357
               

               Cow position:
               chr13:31507575-31507464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               245-358
               

               Cow position:
               chr13:12237313-12237426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-359
               

               Cow position:
               chr13:21277599-21277485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-360
               

               Cow position:
               chr13:11565705-11565820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-360
               

               Cow position:
               chr13:13796943-13796828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-360
               

               Cow position:
               chr13:30148695-30148580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-360
               

               Cow position:
               chr13:53865504-53865619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-362
               

               Cow position:
               chr13:8637566-8637683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-362
               

               Cow position:
               chr13:44434961-44434846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               245-363
               

               Cow position:
               chr13:1075171-1075053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-363
               

               Cow position:
               chr13:33854816-33854698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-364
               

               Cow position:
               chr13:40634732-40634852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               245-365
               

               Cow position:
               chr13:15060507-15060628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               245-366
               

               Cow position:
               chr13:6962321-6962441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               245-366
               

               Cow position:
               chr13:50622943-50622823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               245-368
               

               Cow position:
               chr13:43787969-43787846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-368
               

               Cow position:
               chr13:43839808-43839685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-369
               

               Cow position:
               chr13:9124794-9124917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 45
               

               Conread position:
               245-370
               

               Cow position:
               chr13:21188236-21188360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               245-370
               

               Cow position:
               chr13:28439277-28439403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               245-370
               

               Cow position:
               chr13:37751198-37751074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               245-374
               

               Cow position:
               chr13:18093005-18092878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-374
               

               Cow position:
               chr13:37614328-37614193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               245-374
               

               Cow position:
               chr13:38703009-38702879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               245-374
               

               Cow position:
               chr13:42849264-42849136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-380
               

               Cow position:
               chr13:52536430-52536568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               245-381
               

               Cow position:
               chr13:10522805-10522937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               245-381
               

               Cow position:
               chr13:17813339-17813475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-382
               

               Cow position:
               chr13:39398519-39398658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               245-385
               

               Cow position:
               chr13:52880996-52880860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               245-386
               

               Cow position:
               chr13:8699869-8699728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-386
               

               Cow position:
               chr13:47243684-47243546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               245-386
               

               Cow position:
               chr13:48222680-48222539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-387
               

               Cow position:
               chr13:4404399-4404541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-387
               

               Cow position:
               chr13:13182066-13182204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               245-389
               

               Cow position:
               chr13:20519929-20520073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-390
               

               Cow position:
               chr13:56958849-56958981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               245-392
               

               Cow position:
               chr13:6465823-6465675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               245-392
               

               Cow position:
               chr13:7046738-7046885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 126
               

               Conread position:
               245-392
               

               Cow position:
               chr13:14644919-14645066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 104
               

               Conread position:
               245-392
               

               Cow position:
               chr13:15996902-15997049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               245-392
               

               Cow position:
               chr13:37621489-37621345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               245-392
               

               Cow position:
               chr13:42640254-42640397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               245-392
               

               Cow position:
               chr13:55765310-55765163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               245-392
               

               Cow position:
               chr13:59461112-59461253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               245-393
               

               Cow position:
               chr13:21981104-21980960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               245-393
               

               Cow position:
               chr13:51814064-51813920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               245-394
               

               Cow position:
               chr13:26889090-26889239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               245-398
               

               Cow position:
               chr13:18615250-18615404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 145
               

               Conread position:
               245-400
               

               Cow position:
               chr13:1462424-1462273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               152, 90
               

               Conread position:
               245-401
               

               Cow position:
               chr13:16160286-16160441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 81
               

               Conread position:
               245-402
               

               Cow position:
               chr13:55081011-55081167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               245-404
               

               Cow position:
               chr13:6183552-6183394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               245-406
               

               Cow position:
               chr13:3209453-3209291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 132
               

               Conread position:
               245-407
               

               Cow position:
               chr13:15083533-15083688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               245-411
               

               Cow position:
               chr13:8667487-8667653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               117, 87
               

               Conread position:
               245-411
               

               Cow position:
               chr13:40541237-40541072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               245-412
               

               Cow position:
               chr13:8478271-8478438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 120
               

               Conread position:
               245-418
               

               Cow position:
               chr13:28440667-28440494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               148, 82
               

               Conread position:
               245-421
               

               Cow position:
               chr13:15984876-15985054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               245-422
               

               Cow position:
               chr13:585002-584827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               145, 84
               

               Conread position:
               245-422
               

               Cow position:
               chr13:20288516-20288699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 135
               

               Conread position:
               245-424
               

               Cow position:
               chr13:9117697-9117524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               245-425
               

               Cow position:
               chr13:7149641-7149465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               245-427
               

               Cow position:
               chr13:21171704-21171522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               92, 153
               

               Conread position:
               245-428
               

               Cow position:
               chr13:52459612-52459431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               150, 87
               

               Conread position:
               245-430
               

               Cow position:
               chr13:45073387-45073198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               245-431
               

               Cow position:
               chr13:20217530-20217341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               245-432
               

               Cow position:
               chr13:3211417-3211606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               245-432
               

               Cow position:
               chr13:17350223-17350408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               145, 64
               

               Conread position:
               245-432
               

               Cow position:
               chr13:37503715-37503526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               66, 74
               

               Conread position:
               245-432
               

               Cow position:
               chr13:40154863-40154681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               245-433
               

               Cow position:
               chr13:35557243-35557049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               245-434
               

               Cow position:
               chr13:11434705-11434523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-434
               

               Cow position:
               chr13:12673420-12673240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               147, 16
               

               Conread position:
               245-434
               

               Cow position:
               chr13:17823082-17822894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               245-434
               

               Cow position:
               chr13:17837819-17838006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-434
               

               Cow position:
               chr13:18197740-18197550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               149, 115
               

               Conread position:
               245-434
               

               Cow position:
               chr13:20534765-20534952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               179, 28
               

               Conread position:
               245-434
               

               Cow position:
               chr13:52057425-52057617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               245-434
               

               Cow position:
               chr13:62007975-62008169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               245-441
               

               Cow position:
               chr13:15239643-15239456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               245-441
               

               Cow position:
               chr13:20314755-20314555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               245-444
               

               Cow position:
               chr13:31008957-31008756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               128, 136
               

               Conread position:
               245-447
               

               Cow position:
               chr13:42672555-42672352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               245-449
               

               Cow position:
               chr13:55162080-55162283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               245-451
               

               Cow position:
               chr13:827114-827316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-451
               

               Cow position:
               chr13:21170394-21170604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               88, 203
               

               Conread position:
               245-451
               

               Cow position:
               chr13:52477778-52477572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               149, 52
               

               Conread position:
               245-456
               

               Cow position:
               chr13:17498084-17498296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               169, 128
               

               Conread position:
               245-456
               

               Cow position:
               chr13:20137689-20137903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               245-456
               

               Cow position:
               chr13:27180909-27181109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               245-456
               

               Cow position:
               chr13:37521874-37521665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               151, 12
               

               Conread position:
               245-456
               

               Cow position:
               chr13:40491082-40491292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 169
               

               Conread position:
               245-456
               

               Cow position:
               chr13:42229181-42229398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               139, 16
               

               Conread position:
               245-462
               

               Cow position:
               chr13:10925051-10924828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 40
               

               Conread position:
               245-472
               

               Cow position:
               chr13:6663884-6663648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               142, 80
               

               Conread position:
               245-473
               

               Cow position:
               chr13:21127470-21127244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               245-474
               

               Cow position:
               chr13:3989072-3989304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               148, 12
               

               Conread position:
               245-474
               

               Cow position:
               chr13:53330140-53330368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 150
               

               Conread position:
               245-476
               

               Cow position:
               chr13:12974682-12974905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               212, 131
               

               Conread position:
               245-477
               

               Cow position:
               chr13:620376-620157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               245-477
               

               Cow position:
               chr13:54128727-54128489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               149, 26
               

               Conread position:
               245-478
               

               Cow position:
               chr13:13533796-13533565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               245-480
               

               Cow position:
               chr13:36876929-36877152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               245-481
               

               Cow position:
               chr13:9975208-9974967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               46, 142
               

               Conread position:
               245-482
               

               Cow position:
               chr13:16714396-16714151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               245-483
               

               Cow position:
               chr13:13297547-13297783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               146, 45
               

               Conread position:
               245-483
               

               Cow position:
               chr13:37985876-37985649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               210, 144
               

               Conread position:
               245-483
               

               Cow position:
               chr13:47022232-47022469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               245-485
               

               Cow position:
               chr13:1568800-1569034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 75
               

               Conread position:
               245-485
               

               Cow position:
               chr13:10220829-10221060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               226, 113
               

               Conread position:
               245-485
               

               Cow position:
               chr13:19320398-19320646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               12, 236
               

               Conread position:
               245-486
               

               Cow position:
               chr13:1043094-1042853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 16
               

               Conread position:
               245-486
               

               Cow position:
               chr13:14576081-14576318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               245-486
               

               Cow position:
               chr13:18994994-18995240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               245-491
               

               Cow position:
               chr13:17004724-17004477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               151, 40
               

               Conread position:
               245-492
               

               Cow position:
               chr13:19278963-19279209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 97
               

               Conread position:
               245-492
               

               Cow position:
               chr13:51901452-51901705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 227
               

               Conread position:
               245-494
               

               Cow position:
               chr13:15289053-15288809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               147, 80
               

               Conread position:
               245-495
               

               Cow position:
               chr13:58763749-58763510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               243, 20
               

               Conread position:
               245-495
               

               Cow position:
               chr13:62518457-62518210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               147, 22
               

               Conread position:
               245-496
               

               Cow position:
               chr13:23856079-23856335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 110
               

               Conread position:
               245-496
               

               Cow position:
               chr13:54702047-54702310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               245-496
               

               Cow position:
               chr13:60375620-60375365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               245-497
               

               Cow position:
               chr13:547363-547609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               208, 38
               

               Conread position:
               245-497
               

               Cow position:
               chr13:6389264-6389504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               177, 70
               

               Conread position:
               245-497
               

               Cow position:
               chr13:6616891-6616628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               101, 230
               

               Conread position:
               245-497
               

               Cow position:
               chr13:7059330-7059595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               245-497
               

               Cow position:
               chr13:9265958-9265708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 16
               

               Conread position:
               245-497
               

               Cow position:
               chr13:9644012-9643762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 21
               

               Conread position:
               245-497
               

               Cow position:
               chr13:9900027-9900273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               150, 43
               

               Conread position:
               245-497
               

               Cow position:
               chr13:11321749-11321492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               112, 147
               

               Conread position:
               245-497
               

               Cow position:
               chr13:13088898-13089143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               156, 20
               

               Conread position:
               245-497
               

               Cow position:
               chr13:15282066-15281813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 9
               

               Conread position:
               245-497
               

               Cow position:
               chr13:17021857-17021605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               159, 56
               

               Conread position:
               245-497
               

               Cow position:
               chr13:23960934-23960689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               212, 102
               

               Conread position:
               245-497
               

               Cow position:
               chr13:25579322-25579063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               143, 201
               

               Conread position:
               245-497
               

               Cow position:
               chr13:41806640-41806899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 234
               

               Conread position:
               245-497
               

               Cow position:
               chr13:46525561-46525321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               245-497
               

               Cow position:
               chr13:53566469-53566719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               141, 73
               

               Conread position:
               245-497
               

               Cow position:
               chr13:54582742-54583001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               147, 64
               

               Conread position:
               245-498
               

               Cow position:
               chr13:20288206-20288455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               208, 82
               

               Conread position:
               245-510
               

               Cow position:
               chr13:52228232-52227963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               130, 153
               

               Conread position:
               245-514
               

               Cow position:
               chr13:8355073-8355333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               144, 75
               

               Conread position:
               245-516
               

               Cow position:
               chr13:18172204-18172484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 233
               

               Conread position:
               245-516
               

               Cow position:
               chr13:25604739-25604480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               209, 22
               

               Conread position:
               245-517
               

               Cow position:
               chr13:18058379-18058102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 12
               

               Conread position:
               245-517
               

               Cow position:
               chr13:40722839-40722556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 151
               

               Conread position:
               245-524
               

               Cow position:
               chr13:18696709-18696996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 37
               

               Conread position:
               245-527
               

               Cow position:
               chr13:45725754-45726050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               245-534
               

               Cow position:
               chr13:37818883-37818584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               151, 73
               

               Conread position:
               245-534
               

               Cow position:
               chr13:39367827-39368122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 144
               

               Conread position:
               245-535
               

               Cow position:
               chr13:4420198-4420517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               21, 303
               

               Conread position:
               245-536
               

               Cow position:
               chr13:8609679-8609380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               86, 70
               

               Conread position:
               245-538
               

               Cow position:
               chr13:37803759-37804053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 127
               

               Conread position:
               245-538
               

               Cow position:
               chr13:48165558-48165256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               158, 82
               

               Conread position:
               245-539
               

               Cow position:
               chr13:21288219-21287916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 146
               

               Conread position:
               245-540
               

               Cow position:
               chr13:972029-971723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 78
               

               Conread position:
               245-540
               

               Cow position:
               chr13:2413897-2414201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               245-540
               

               Cow position:
               chr13:3315807-3315499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 151
               

               Conread position:
               245-540
               

               Cow position:
               chr13:5263413-5263111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               243, 153
               

               Conread position:
               245-540
               

               Cow position:
               chr13:5279334-5279014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 299
               

               Conread position:
               245-540
               

               Cow position:
               chr13:5671718-5671426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               160, 131
               

               Conread position:
               245-540
               

               Cow position:
               chr13:6189732-6189455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               115, 102
               

               Conread position:
               245-540
               

               Cow position:
               chr13:6974030-6974335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 27
               

               Conread position:
               245-540
               

               Cow position:
               chr13:7076125-7076431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 107
               

               Conread position:
               245-540
               

               Cow position:
               chr13:9142149-9142459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               148, 35
               

               Conread position:
               245-540
               

               Cow position:
               chr13:9587713-9587408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               245-540
               

               Cow position:
               chr13:11096050-11096347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 37
               

               Conread position:
               245-540
               

               Cow position:
               chr13:11643807-11644108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 207
               

               Conread position:
               245-540
               

               Cow position:
               chr13:12876104-12875810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 52
               

               Conread position:
               245-540
               

               Cow position:
               chr13:13320665-13320955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 151
               

               Conread position:
               245-540
               

               Cow position:
               chr13:13765658-13765943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 63
               

               Conread position:
               245-540
               

               Cow position:
               chr13:14063655-14063349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 230
               

               Conread position:
               245-540
               

               Cow position:
               chr13:14927130-14927414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               245-540
               

               Cow position:
               chr13:15041603-15041297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               245-540
               

               Cow position:
               chr13:15193018-15192719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 89
               

               Conread position:
               245-540
               

               Cow position:
               chr13:15257499-15257203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               145, 68
               

               Conread position:
               245-540
               

               Cow position:
               chr13:15991363-15991047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               245-540
               

               Cow position:
               chr13:17439900-17439591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 82
               

               Conread position:
               245-540
               

               Cow position:
               chr13:18491464-18491770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 203
               

               Conread position:
               245-540
               

               Cow position:
               chr13:18851949-18852251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               245-540
               

               Cow position:
               chr13:20231322-20231025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 63
               

               Conread position:
               245-540
               

               Cow position:
               chr13:20606249-20605944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               143, 201
               

               Conread position:
               245-540
               

               Cow position:
               chr13:20666518-20666211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 82
               

               Conread position:
               245-540
               

               Cow position:
               chr13:20706337-20706027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 143
               

               Conread position:
               245-540
               

               Cow position:
               chr13:20820969-20820665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 148
               

               Conread position:
               245-540
               

               Cow position:
               chr13:21242216-21241917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               243, 191
               

               Conread position:
               245-540
               

               Cow position:
               chr13:21275727-21276030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 142
               

               Conread position:
               245-540
               

               Cow position:
               chr13:21283836-21283531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               245-540
               

               Cow position:
               chr13:24369450-24369759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 58
               

               Conread position:
               245-540
               

               Cow position:
               chr13:24715109-24715417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 287
               

               Conread position:
               245-540
               

               Cow position:
               chr13:25547714-25547418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               203, 153
               

               Conread position:
               245-540
               

               Cow position:
               chr13:25817395-25817688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 73
               

               Conread position:
               245-540
               

               Cow position:
               chr13:25926658-25926967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 178
               

               Conread position:
               245-540
               

               Cow position:
               chr13:26369392-26369701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 66
               

               Conread position:
               245-540
               

               Cow position:
               chr13:27525392-27525086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 59
               

               Conread position:
               245-540
               

               Cow position:
               chr13:34261099-34261407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 144
               

               Conread position:
               245-540
               

               Cow position:
               chr13:35659627-35659928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               6, 74
               

               Conread position:
               245-540
               

               Cow position:
               chr13:36771552-36771250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 40
               

               Conread position:
               245-540
               

               Cow position:
               chr13:37069213-37069524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               147, 175
               

               Conread position:
               245-540
               

               Cow position:
               chr13:37593079-37592763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               245-540
               

               Cow position:
               chr13:38284111-38283809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               245-540
               

               Cow position:
               chr13:38329484-38329805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               148, 241
               

               Conread position:
               245-540
               

               Cow position:
               chr13:42200487-42200794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 153
               

               Conread position:
               245-540
               

               Cow position:
               chr13:43185012-43184698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               245-540
               

               Cow position:
               chr13:43762037-43762340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 16
               

               Conread position:
               245-540
               

               Cow position:
               chr13:45352899-45353221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               139, 301
               

               Conread position:
               245-540
               

               Cow position:
               chr13:47186102-47186399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               245-540
               

               Cow position:
               chr13:55316329-55316014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 239
               

               Conread position:
               245-540
               

               Cow position:
               chr13:56148389-56148716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               245-540
               

               Cow position:
               chr13:56155283-56154986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               149, 82
               

               Conread position:
               245-540
               

               Cow position:
               chr13:56160578-56160251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               245-540
               

               Cow position:
               chr13:57475538-57475241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               147, 62
               

               Conread position:
               245-540
               

               Cow position:
               chr13:60509252-60508944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               144, 178
               

               Conread position:
               245-540
               

               Cow position:
               chr13:60973948-60974253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               246-330
               

               Cow position:
               chr13:53619873-53619957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               76
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-350
               

               Cow position:
               chr13:19261486-19261591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               246-357
               

               Cow position:
               chr13:47227491-47227379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               246-359
               

               Cow position:
               chr13:1539110-1539222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               246-360
               

               Cow position:
               chr13:11942310-11942196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-384
               

               Cow position:
               chr13:16908086-16908224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-388
               

               Cow position:
               chr13:9707879-9707738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               246-389
               

               Cow position:
               chr13:6926386-6926529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-392
               

               Cow position:
               chr13:50457727-50457873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-394
               

               Cow position:
               chr13:21294944-21295095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               246-412
               

               Cow position:
               chr13:33601366-33601195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 102
               

               Conread position:
               246-413
               

               Cow position:
               chr13:41157274-41157440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               246-418
               

               Cow position:
               chr13:8350192-8350372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               246-420
               

               Cow position:
               chr13:6342219-6342045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               151, 80
               

               Conread position:
               246-425
               

               Cow position:
               chr13:43829113-43829292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               152, 139
               

               Conread position:
               246-427
               

               Cow position:
               chr13:17611683-17611500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               246-431
               

               Cow position:
               chr13:43893454-43893267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               246-434
               

               Cow position:
               chr13:12925646-12925830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 90
               

               Conread position:
               246-447
               

               Cow position:
               chr13:15756992-15757190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               246-451
               

               Cow position:
               chr13:6980790-6980982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               246-455
               

               Cow position:
               chr13:38873075-38872874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               246-456
               

               Cow position:
               chr13:7333136-7332920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               246-476
               

               Cow position:
               chr13:46329737-46329501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               246-477
               

               Cow position:
               chr13:13196108-13196340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               130, 222
               

               Conread position:
               246-477
               

               Cow position:
               chr13:18929398-18929631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               246-481
               

               Cow position:
               chr13:20154870-20155107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               110, 72
               

               Conread position:
               246-482
               

               Cow position:
               chr13:60966638-60966870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               246-485
               

               Cow position:
               chr13:54389152-54388908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 232
               

               Conread position:
               246-496
               

               Cow position:
               chr13:5911026-5910773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               148, 35
               

               Conread position:
               246-497
               

               Cow position:
               chr13:11381854-11381598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               141, 157
               

               Conread position:
               246-497
               

               Cow position:
               chr13:11591620-11591870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               246-497
               

               Cow position:
               chr13:12449117-12448868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 21
               

               Conread position:
               246-497
               

               Cow position:
               chr13:13501748-13501499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               206, 24
               

               Conread position:
               246-497
               

               Cow position:
               chr13:23478899-23479150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               145, 178
               

               Conread position:
               246-497
               

               Cow position:
               chr13:23667122-23667379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               152, 120
               

               Conread position:
               246-497
               

               Cow position:
               chr13:26698629-26698373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               127, 82
               

               Conread position:
               246-497
               

               Cow position:
               chr13:37381670-37381930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               246-500
               

               Cow position:
               chr13:38561812-38562069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               246-540
               

               Cow position:
               chr13:5082520-5082829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               141, 74
               

               Conread position:
               246-540
               

               Cow position:
               chr13:11460502-11460800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               242, 150
               

               Conread position:
               246-540
               

               Cow position:
               chr13:15195334-15195034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               209, 26
               

               Conread position:
               246-540
               

               Cow position:
               chr13:19022140-19022453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               135, 234
               

               Conread position:
               246-540
               

               Cow position:
               chr13:20679208-20679520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               138, 159
               

               Conread position:
               246-540
               

               Cow position:
               chr13:24230083-24230387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 139
               

               Conread position:
               246-540
               

               Cow position:
               chr13:28683231-28683534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 184
               

               Conread position:
               246-540
               

               Cow position:
               chr13:32017643-32017347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               246-540
               

               Cow position:
               chr13:34281548-34281855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               155, 67
               

               Conread position:
               246-540
               

               Cow position:
               chr13:37775337-37775052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               246-540
               

               Cow position:
               chr13:40943111-40943423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               246-540
               

               Cow position:
               chr13:43919392-43919082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               173, 138
               

               Conread position:
               246-540
               

               Cow position:
               chr13:52055723-52055421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 170
               

               Conread position:
               246-540
               

               Cow position:
               chr13:56686303-56686602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               127, 81
               

               Conread position:
               247-351
               

               Cow position:
               chr13:11146927-11147031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-355
               

               Cow position:
               chr13:3153621-3153728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               247-357
               

               Cow position:
               chr13:52913743-52913853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-368
               

               Cow position:
               chr13:53850693-53850815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               247-382
               

               Cow position:
               chr13:50768469-50768601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               247-384
               

               Cow position:
               chr13:28536447-28536315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               247-387
               

               Cow position:
               chr13:19750585-19750725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               247-390
               

               Cow position:
               chr13:15993257-15993399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               247-420
               

               Cow position:
               chr13:34873459-34873633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               145, 171
               

               Conread position:
               247-427
               

               Cow position:
               chr13:52641078-52640900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               247-432
               

               Cow position:
               chr13:11103330-11103136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               247-442
               

               Cow position:
               chr13:48554236-48554438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               138, 49
               

               Conread position:
               247-447
               

               Cow position:
               chr13:5005871-5006062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               169, 58
               

               Conread position:
               247-447
               

               Cow position:
               chr13:14411765-14411956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               247-454
               

               Cow position:
               chr13:25978320-25978114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               247-455
               

               Cow position:
               chr13:23525982-23526187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               247-456
               

               Cow position:
               chr13:28291194-28291404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               140, 24
               

               Conread position:
               247-460
               

               Cow position:
               chr13:19778983-19778766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               103, 139
               

               Conread position:
               247-461
               

               Cow position:
               chr13:24110350-24110569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 200
               

               Conread position:
               247-466
               

               Cow position:
               chr13:56034989-56034766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               143, 88
               

               Conread position:
               247-467
               

               Cow position:
               chr13:20115118-20115340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 156
               

               Conread position:
               247-481
               

               Cow position:
               chr13:55727772-55728006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               208, 157
               

               Conread position:
               247-482
               

               Cow position:
               chr13:1231510-1231755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               247-483
               

               Cow position:
               chr13:16038415-16038182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               208, 40
               

               Conread position:
               247-486
               

               Cow position:
               chr13:32282998-32283236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               144, 105
               

               Conread position:
               247-492
               

               Cow position:
               chr13:20088845-20088584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               247-497
               

               Cow position:
               chr13:2773997-2774251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 146
               

               Conread position:
               247-497
               

               Cow position:
               chr13:26480334-26480089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               211, 72
               

               Conread position:
               247-498
               

               Cow position:
               chr13:27493987-27493725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               247-516
               

               Cow position:
               chr13:15349375-15349117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               247-538
               

               Cow position:
               chr13:35526325-35526044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               250, 55
               

               Conread position:
               247-540
               

               Cow position:
               chr13:5713185-5713469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               218, 43
               

               Conread position:
               247-540
               

               Cow position:
               chr13:11060857-11061159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 139
               

               Conread position:
               247-540
               

               Cow position:
               chr13:17971159-17970859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 54
               

               Conread position:
               247-540
               

               Cow position:
               chr13:19223525-19223824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               208, 72
               

               Conread position:
               247-540
               

               Cow position:
               chr13:19393162-19393462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 71
               

               Conread position:
               247-540
               

               Cow position:
               chr13:21176449-21176149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               206, 35
               

               Conread position:
               247-540
               

               Cow position:
               chr13:24585918-24586221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               247-540
               

               Cow position:
               chr13:26261918-26261619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               206, 138
               

               Conread position:
               247-540
               

               Cow position:
               chr13:33256371-33256671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               132, 65
               

               Conread position:
               247-540
               

               Cow position:
               chr13:52749600-52749312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 88
               

               Conread position:
               247-540
               

               Cow position:
               chr13:61977079-61976788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               208, 36
               

               Conread position:
               248-351
               

               Cow position:
               chr13:20531603-20531500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-355
               

               Cow position:
               chr13:28524446-28524339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-390
               

               Cow position:
               chr13:34018801-34018943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-391
               

               Cow position:
               chr13:18340404-18340547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               125
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-393
               

               Cow position:
               chr13:47676064-47675919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-395
               

               Cow position:
               chr13:28071742-28071891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               248-429
               

               Cow position:
               chr13:16020722-16020904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               248-477
               

               Cow position:
               chr13:11201912-11202129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               248-495
               

               Cow position:
               chr13:22887118-22886872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               248-497
               

               Cow position:
               chr13:6442234-6441976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               157, 89
               

               Conread position:
               248-497
               

               Cow position:
               chr13:20180287-20180541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               150, 23
               

               Conread position:
               248-497
               

               Cow position:
               chr13:28552461-28552720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               170, 22
               

               Conread position:
               248-497
               

               Cow position:
               chr13:37640461-37640710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 12
               

               Conread position:
               248-538
               

               Cow position:
               chr13:52894018-52894317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               89, 142
               

               Conread position:
               248-540
               

               Cow position:
               chr13:20466414-20466117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               153, 104
               

               Conread position:
               248-540
               

               Cow position:
               chr13:23270334-23270038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 84
               

               Conread position:
               249-355
               

               Cow position:
               chr13:37978258-37978153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               249-367
               

               Cow position:
               chr13:57770114-57769999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               249-368
               

               Cow position:
               chr13:9884406-9884526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               249-369
               

               Cow position:
               chr13:37980885-37980766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               249-374
               

               Cow position:
               chr13:8450202-8450327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               249-382
               

               Cow position:
               chr13:36666402-36666269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               249-391
               

               Cow position:
               chr13:13775371-13775230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               249-402
               

               Cow position:
               chr13:15460904-15460751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               249-404
               

               Cow position:
               chr13:52569131-52568976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               249-405
               

               Cow position:
               chr13:43525362-43525205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               249-410
               

               Cow position:
               chr13:31529750-31529912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               249-429
               

               Cow position:
               chr13:7190837-7191031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               75, 41
               

               Conread position:
               249-430
               

               Cow position:
               chr13:1147278-1147098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               249-432
               

               Cow position:
               chr13:19007807-19007987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               145, 79
               

               Conread position:
               249-434
               

               Cow position:
               chr13:18299273-18299461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               249-434
               

               Cow position:
               chr13:25428351-25428171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               249-446
               

               Cow position:
               chr13:6861053-6861251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               249-451
               

               Cow position:
               chr13:9981968-9981767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               145, 90
               

               Conread position:
               249-454
               

               Cow position:
               chr13:13578162-13577957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               249-456
               

               Cow position:
               chr13:19892359-19892151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 22
               

               Conread position:
               249-476
               

               Cow position:
               chr13:24692829-24693054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               114, 22
               

               Conread position:
               249-482
               

               Cow position:
               chr13:4664984-4664759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               214, 16
               

               Conread position:
               249-482
               

               Cow position:
               chr13:15885148-15884912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 12
               

               Conread position:
               249-482
               

               Cow position:
               chr13:20881056-20880818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               249-485
               

               Cow position:
               chr13:49475950-49476199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               99, 164
               

               Conread position:
               249-486
               

               Cow position:
               chr13:19364112-19364356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               249-486
               

               Cow position:
               chr13:20261456-20261213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               249-486
               

               Cow position:
               chr13:21136033-21135788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 232
               

               Conread position:
               249-486
               

               Cow position:
               chr13:22075543-22075785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               249-495
               

               Cow position:
               chr13:19883164-19882915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               249-496
               

               Cow position:
               chr13:20579784-20580028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               143, 43
               

               Conread position:
               249-497
               

               Cow position:
               chr13:10929116-10928870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               150, 86
               

               Conread position:
               249-497
               

               Cow position:
               chr13:16343566-16343808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               146, 69
               

               Conread position:
               249-497
               

               Cow position:
               chr13:17346682-17346929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               249-497
               

               Cow position:
               chr13:20473812-20473567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 209
               

               Conread position:
               249-497
               

               Cow position:
               chr13:25537495-25537756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               249-497
               

               Cow position:
               chr13:51116152-51115904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 172
               

               Conread position:
               249-497
               

               Cow position:
               chr13:54344653-54344896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               185, 21
               

               Conread position:
               249-498
               

               Cow position:
               chr13:12574508-12574759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               95, 9
               

               Conread position:
               249-498
               

               Cow position:
               chr13:30798594-30798848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               249-498
               

               Cow position:
               chr13:32717991-32717750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               206, 22
               

               Conread position:
               249-507
               

               Cow position:
               chr13:43194041-43194309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               99, 195
               

               Conread position:
               249-511
               

               Cow position:
               chr13:44003573-44003860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               140, 103
               

               Conread position:
               249-524
               

               Cow position:
               chr13:11260147-11260418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 79
               

               Conread position:
               249-528
               

               Cow position:
               chr13:9802939-9803230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               249-536
               

               Cow position:
               chr13:20839438-20839729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 147
               

               Conread position:
               249-536
               

               Cow position:
               chr13:34995457-34995164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               88, 192
               

               Conread position:
               249-538
               

               Cow position:
               chr13:6540443-6540140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               124, 12
               

               Conread position:
               249-539
               

               Cow position:
               chr13:20879952-20879660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 124
               

               Conread position:
               249-539
               

               Cow position:
               chr13:25435251-25434955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               249-539
               

               Cow position:
               chr13:46312140-46311861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               247, 8
               

               Conread position:
               249-539
               

               Cow position:
               chr13:52586165-52585846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 237
               

               Conread position:
               249-540
               

               Cow position:
               chr13:12206921-12207218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 7
               

               Conread position:
               249-540
               

               Cow position:
               chr13:12614125-12614435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               140, 75
               

               Conread position:
               249-540
               

               Cow position:
               chr13:14771324-14771636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               249-540
               

               Cow position:
               chr13:15166690-15166998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               249-540
               

               Cow position:
               chr13:20378448-20378162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 79
               

               Conread position:
               249-540
               

               Cow position:
               chr13:20784462-20784763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 199
               

               Conread position:
               249-540
               

               Cow position:
               chr13:24753759-24754059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 140
               

               Conread position:
               249-540
               

               Cow position:
               chr13:25695895-25695593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               193, 45
               

               Conread position:
               249-540
               

               Cow position:
               chr13:31813747-31814042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 128
               

               Conread position:
               249-540
               

               Cow position:
               chr13:34728966-34728662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               150, 35
               

               Conread position:
               249-540
               

               Cow position:
               chr13:37484407-37484095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               142, 181
               

               Conread position:
               249-540
               

               Cow position:
               chr13:37981872-37981577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 75
               

               Conread position:
               249-540
               

               Cow position:
               chr13:53573841-53574144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               249-540
               

               Cow position:
               chr13:54094682-54094981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               249-540
               

               Cow position:
               chr13:54286852-54286589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               249-540
               

               Cow position:
               chr13:60430206-60429903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               250-360
               

               Cow position:
               chr13:6608509-6608399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               250-365
               

               Cow position:
               chr13:49283907-49283792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               250-370
               

               Cow position:
               chr13:17057974-17057855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               250-387
               

               Cow position:
               chr13:6486374-6486241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               250-393
               

               Cow position:
               chr13:52934301-52934443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               250-402
               

               Cow position:
               chr13:25450612-25450461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               250-403
               

               Cow position:
               chr13:47193263-47193407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               250-418
               

               Cow position:
               chr13:55494653-55494479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               250-426
               

               Cow position:
               chr13:8232875-8233044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               250-434
               

               Cow position:
               chr13:11231421-11231251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               143, 78
               

               Conread position:
               250-442
               

               Cow position:
               chr13:13211757-13211951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               144, 168
               

               Conread position:
               250-461
               

               Cow position:
               chr13:20868878-20868671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               205, 77
               

               Conread position:
               250-475
               

               Cow position:
               chr13:10932427-10932650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               143, 11
               

               Conread position:
               250-495
               

               Cow position:
               chr13:11808450-11808680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               199, 77
               

               Conread position:
               250-495
               

               Cow position:
               chr13:24280128-24280364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               250-498
               

               Cow position:
               chr13:12745546-12745796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               250-538
               

               Cow position:
               chr13:9664932-9665239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               250-538
               

               Cow position:
               chr13:37947078-37946790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               139, 65
               

               Conread position:
               250-540
               

               Cow position:
               chr13:6079539-6079244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 134
               

               Conread position:
               250-540
               

               Cow position:
               chr13:12989723-12990021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               207, 129
               

               Conread position:
               250-540
               

               Cow position:
               chr13:18166605-18166905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 227
               

               Conread position:
               250-540
               

               Cow position:
               chr13:47007843-47007561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               203, 9
               

               Conread position:
               250-540
               

               Cow position:
               chr13:51822000-51821717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               210, 79
               

               Conread position:
               250-540
               

               Cow position:
               chr13:51940607-51940906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 228
               

               Conread position:
               251-353
               

               Cow position:
               chr13:9391434-9391536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
UCSC Genome Browser
               Conread position:
               251-380
               

               Cow position:
               chr13:38012206-38012336 (view  custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               127, 0
               
UCSC Genome Browser
               
               
               
Conread position: 251-384

               
               
               
Cow position: chr13:15143968-15143836 (view  custom track)

               
               
               
Alignm length: 134

               
               
               
Alignm identity: 112

               
               
               
Alignm E-value: 1e-32

               
               
               
Alignm gaps (pig, cow): 85, 0
UCSC Genome Browser
               
               
               
Conread position: 251-384

               
               
               
Cow position: chr13:49356175-49356042 (view  custom track)

               
               
               
Alignm length: 134

               
               
               
Alignm identity: 106

               
               
               
Alignm E-value: 6e-28

               
               
               
Alignm gaps (pig, cow): 0, 0

               
               
               Conread position:251-387
               
               
               Cow position:chr13:7104528-7104664 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:110
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:251-410
               
               
               Cow position:chr13:4588739-4588901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:124
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):98, 55

               
               
               Conread position:251-455
               
               
               Cow position:chr13:20271351-20271150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:161
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):33, 54

               
               
               Conread position:251-471
               
               
               Cow position:chr13:50568531-50568319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):195, 52

               
               
               Conread position:251-497
               
               
               Cow position:chr13:17966335-17966085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):30, 14

               
               
               Conread position:251-497
               
               
               Cow position:chr13:52284690-52284933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):203, 26

               
               
               Conread position:251-534
               
               
               Cow position:chr13:13465892-13465621 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:210
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):237, 84

               
               
               Conread position:251-538
               
               
               Cow position:chr13:44201883-44202162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:219
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):156, 22

               
               
               Conread position:251-539
               
               
               Cow position:chr13:4552692-4552977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:221
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):203, 81

               
               
               Conread position:251-540
               
               
               Cow position:chr13:5758469-5758170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 227

               
               
               Conread position:251-540
               
               
               Cow position:chr13:38278273-38277962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):169, 16

               
               
               Conread position:251-540
               
               
               Cow position:chr13:43869238-43868945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:214
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):201, 10

               
               
               Conread position:251-540
               
               
               Cow position:chr13:46111843-46112142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):149, 64

               
               
               Conread position:252-476
               
               
               Cow position:chr13:7265244-7265022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):137, 13

               
               
               Conread position:252-486
               
               
               Cow position:chr13:62247012-62247240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:176
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):112, 45

               
               
               Conread position:252-498
               
               
               Cow position:chr13:47188311-47188570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):7, 28

               
               
               Conread position:252-520
               
               
               Cow position:chr13:17977229-17977489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:206
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):203, 41

               
               
               Conread position:252-539
               
               
               Cow position:chr13:23167226-23166922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:222
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):134, 284

               
               
               Conread position:252-540
               
               
               Cow position:chr13:311313-311605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:222
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):202, 81

               
               
               Conread position:252-540
               
               
               Cow position:chr13:7663546-7663254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 8

               
               
               Conread position:252-540
               
               
               Cow position:chr13:61990449-61990159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:227
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):203, 30

               
               
               Conread position:253-362
               
               
               Cow position:chr13:21192970-21193079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:110
               
               
               Alignm identity:87
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:253-430
               
               
               Cow position:chr13:17089643-17089470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:253-539
               
               
               Cow position:chr13:12282703-12283012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:216
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):128, 12

               
               
               Conread position:254-421
               
               
               Cow position:chr13:29662905-29663074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:127
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):146, 112

               
               
               Conread position:254-421
               
               
               Cow position:chr13:51857008-51856842 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:141
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):143, 0

               
               
               Conread position:254-482
               
               
               Cow position:chr13:45074037-45073818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:182
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):139, 74

               
               
               Conread position:254-486
               
               
               Cow position:chr13:47322533-47322292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:186
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):139, 0

               
               
               Conread position:254-486
               
               
               Cow position:chr13:58524808-58525046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):136, 78

               
               
               Conread position:254-492
               
               
               Cow position:chr13:15194858-15194613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):119, 224

               
               
               Conread position:254-497
               
               
               Cow position:chr13:10845481-10845717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):210, 69

               
               
               Conread position:254-497
               
               
               Cow position:chr13:12670574-12670324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):138, 185

               
               
               Conread position:254-540
               
               
               Cow position:chr13:185407-185683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:213
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):133, 162

               
               
               Conread position:254-540
               
               
               Cow position:chr13:9593383-9593682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):140, 24

               
               
               Conread position:255-343
               
               
               Cow position:chr13:18215244-18215332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:89
               
               
               Alignm identity:78
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:255-353
               
               
               Cow position:chr13:37984250-37984153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:99
               
               
               Alignm identity:82
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:255-385
               
               
               Cow position:chr13:48439668-48439539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:104
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:255-390
               
               
               Cow position:chr13:50582946-50582807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:110
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:255-390
               
               
               Cow position:chr13:54145599-54145463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):13, 84

               
               
               Conread position:255-391
               
               
               Cow position:chr13:57986060-57985924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:255-392
               
               
               Cow position:chr13:49255362-49255220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:255-394
               
               
               Cow position:chr13:33974612-33974750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:255-426
               
               
               Cow position:chr13:38035716-38035886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):139, 65

               
               
               Conread position:255-434
               
               
               Cow position:chr13:18181897-18181716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:145
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):139, 0

               
               
               Conread position:255-455
               
               
               Cow position:chr13:11397570-11397381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:147
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):135, 49

               
               
               Conread position:255-456
               
               
               Cow position:chr13:46736093-46736291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:161
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):134, 0

               
               
               Conread position:255-484
               
               
               Cow position:chr13:19240309-19240546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:182
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):104, 30

               
               
               Conread position:255-497
               
               
               Cow position:chr13:8374895-8374648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 61

               
               
               Conread position:255-497
               
               
               Cow position:chr13:17745126-17745363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):138, 52

               
               
               Conread position:255-505
               
               
               Cow position:chr13:15144487-15144240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):132, 18

               
               
               Conread position:255-509
               
               
               Cow position:chr13:49503654-49503395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:191
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):139, 151

               
               
               Conread position:255-539
               
               
               Cow position:chr13:151841-152125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:214
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):233, 129

               
               
               Conread position:255-539
               
               
               Cow position:chr13:15110192-15110498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):135, 0

               
               
               Conread position:255-540
               
               
               Cow position:chr13:2404628-2404918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:224
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):7, 77

               
               
               Conread position:255-540
               
               
               Cow position:chr13:12202240-12202540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:215
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):73, 225

               
               
               Conread position:255-540
               
               
               Cow position:chr13:13260881-13261183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:210
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):132, 72

               
               
               Conread position:255-540
               
               
               Cow position:chr13:17114499-17114204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:220
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):138, 24

               
               
               Conread position:255-540
               
               
               Cow position:chr13:17799958-17800247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:222
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):138, 52

               
               
               Conread position:255-540
               
               
               Cow position:chr13:18835082-18835361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:221
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):202, 71

               
               
               Conread position:255-540
               
               
               Cow position:chr13:20570613-20570907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):174, 40

               
               
               Conread position:255-540
               
               
               Cow position:chr13:21235793-21235510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:226
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):202, 115

               
               
               Conread position:255-540
               
               
               Cow position:chr13:51528560-51528271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):135, 42

               
               
               Conread position:255-540
               
               
               Cow position:chr13:57494311-57494008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:222
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):136, 73

               
               
               Conread position:256-360
               
               
               Cow position:chr13:16156346-16156242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:105
               
               
               Alignm identity:90
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:256-383
               
               
               Cow position:chr13:10210778-10210653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:101
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:256-390
               
               
               Cow position:chr13:18516925-18517058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:256-409
               
               
               Cow position:chr13:3125680-3125826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:256-422
               
               
               Cow position:chr13:43139335-43139169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:128
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):136, 72

               
               
               Conread position:256-445
               
               
               Cow position:chr13:25504411-25504602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):134, 0

               
               
               Conread position:256-459
               
               
               Cow position:chr13:31344340-31344149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):40, 74

               
               
               Conread position:256-502
               
               
               Cow position:chr13:59170532-59170787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:191
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):28, 32

               
               
               Conread position:256-540
               
               
               Cow position:chr13:20562872-20563172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):135, 0

               
               
               Conread position:256-540
               
               
               Cow position:chr13:43479938-43480236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:223
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):19, 73

               
               
               Conread position:257-403
               
               
               Cow position:chr13:56535335-56535479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):109, 63

               
               
               Conread position:257-455
               
               
               Cow position:chr13:7149098-7149306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:158
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):21, 170

               
               
               Conread position:257-495
               
               
               Cow position:chr13:1958888-1959129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):142, 41

               
               
               Conread position:257-495
               
               
               Cow position:chr13:17292251-17292011 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):132, 78

               
               
               Conread position:257-495
               
               
               Cow position:chr13:17821390-17821146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:186
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):137, 221

               
               
               Conread position:257-497
               
               
               Cow position:chr13:15945361-15945602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):118, 145

               
               
               Conread position:257-498
               
               
               Cow position:chr13:15902904-15903141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:184
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):231, 147

               
               
               Conread position:257-500
               
               
               Cow position:chr13:17437977-17437741 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:173
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):32, 104

               
               
               Conread position:257-539
               
               
               Cow position:chr13:15974497-15974784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:217
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):18, 108

               
               
               Conread position:257-540
               
               
               Cow position:chr13:890293-890004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:208
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):9, 91

               
               
               Conread position:257-540
               
               
               Cow position:chr13:18989603-18989880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:208
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):231, 13

               
               
               Conread position:257-540
               
               
               Cow position:chr13:34263489-34263198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):137, 8

               
               
               Conread position:258-441
               
               
               Cow position:chr13:51227859-51227679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):98, 142

               
               
               Conread position:258-477
               
               
               Cow position:chr13:15621692-15621918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):133, 40

               
               
               Conread position:258-489
               
               
               Cow position:chr13:14967329-14967100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:163
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):197, 14

               
               
               Conread position:258-492
               
               
               Cow position:chr13:12201206-12200968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:172
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):85, 13

               
               
               Conread position:258-494
               
               
               Cow position:chr13:13176531-13176772 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):134, 219

               
               
               Conread position:258-497
               
               
               Cow position:chr13:8524742-8524497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 210

               
               
               Conread position:258-497
               
               
               Cow position:chr13:15529156-15528908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:188
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):40, 223

               
               
               Conread position:258-534
               
               
               Cow position:chr13:29831556-29831265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 110

               
               
               Conread position:258-538
               
               
               Cow position:chr13:22085865-22085578 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):136, 220

               
               
               Conread position:258-539
               
               
               Cow position:chr13:8652561-8652264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):128, 233

               
               
               Conread position:258-540
               
               
               Cow position:chr13:6061127-6060832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):127, 141

               
               
               Conread position:258-540
               
               
               Cow position:chr13:15958498-15958796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):86, 13

               
               
               Conread position:258-540
               
               
               Cow position:chr13:20509616-20509907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:212
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):30, 13

               
               
               Conread position:259-369
               
               
               Cow position:chr13:18866608-18866719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:90
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:259-489
               
               
               Cow position:chr13:46044042-46044269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:170
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):28, 21

               
               
               Conread position:260-498
               
               
               Cow position:chr13:10989187-10988950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):200, 68

               
               
               Conread position:261-392
               
               
               Cow position:chr13:47634391-47634522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:102
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:261-395
               
               
               Cow position:chr13:33054488-33054355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:104
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:261-424
               
               
               Cow position:chr13:60393668-60393830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:137
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):136, 0

               
               
               Conread position:261-452
               
               
               Cow position:chr13:11079393-11079574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:141
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:261-456
               
               
               Cow position:chr13:49795915-49796095 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):7, 31

               
               
               Conread position:261-497
               
               
               Cow position:chr13:6153900-6153658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):132, 0

               
               
               Conread position:261-497
               
               
               Cow position:chr13:49804861-49805095 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:170
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):193, 46

               
               
               Conread position:261-535
               
               
               Cow position:chr13:17622173-17622455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):197, 10

               
               
               Conread position:261-539
               
               
               Cow position:chr13:47964297-47964025 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:220
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):197, 67

               
               
               Conread position:261-540
               
               
               Cow position:chr13:49022984-49022695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):127, 169

               
               
               Conread position:262-445
               
               
               Cow position:chr13:29123189-29123373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):70, 115

               
               
               Conread position:262-496
               
               
               Cow position:chr13:49847809-49848044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:165
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):136, 15

               
               
               Conread position:262-540
               
               
               Cow position:chr13:9246617-9246889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:207
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):181, 44

               
               
               Conread position:263-458
               
               
               Cow position:chr13:15659166-15659356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:263-540
               
               
               Cow position:chr13:33352467-33352192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:216
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):32, 71

               
               
               Conread position:263-540
               
               
               Cow position:chr13:46181678-46181964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):192, 134

               
               
               Conread position:263-540
               
               
               Cow position:chr13:48597795-48598079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:207
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):123, 88

               
               
               Conread position:264-456
               
               
               Cow position:chr13:48862208-48862017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):130, 63

               
               
               Conread position:264-497
               
               
               Cow position:chr13:32657913-32657672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:168
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):126, 109

               
               
               Conread position:264-497
               
               
               Cow position:chr13:45023322-45023088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:189
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):130, 64

               
               
               Conread position:264-500
               
               
               Cow position:chr13:2803354-2803596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:176
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:264-501
               
               
               Cow position:chr13:19582196-19581961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):88, 64

               
               
               Conread position:264-537
               
               
               Cow position:chr13:8839103-8838825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):25, 13

               
               
               Conread position:265-540
               
               
               Cow position:chr13:34555940-34555676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):126, 86

               
               
               Conread position:266-434
               
               
               Cow position:chr13:19183757-19183923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):131, 0

               
               
               Conread position:269-391
               
               
               Cow position:chr13:15739585-15739703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:104
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:269-453
               
               
               Cow position:chr13:62600899-62601082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):128, 0

               
               
               Conread position:269-477
               
               
               Cow position:chr13:14749516-14749730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:152
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):70, 28

               
               
               Conread position:269-521
               
               
               Cow position:chr13:5658836-5658578 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):6, 46

               
               
               Conread position:269-540
               
               
               Cow position:chr13:8201591-8201311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):82, 72

               
               
               Conread position:270-540
               
               
               Cow position:chr13:25531897-25531613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):123, 69

               
               
               Conread position:271-540
               
               
               Cow position:chr13:23512264-23512534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):178, 96

               
               
               Conread position:272-483
               
               
               Cow position:chr13:60389593-60389386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):151, 122

               
               
               Conread position:272-527
               
               
               Cow position:chr13:52879297-52879565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:206
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):61, 182

               
               
               Conread position:273-540
               
               
               Cow position:chr13:36353061-36352795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):99, 136

               
               
               Conread position:274-498
               
               
               Cow position:chr13:29630754-29630980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):125, 29

               
               
               Conread position:275-401
               
               
               Cow position:chr13:40493821-40493945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:104
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:275-488
               
               
               Cow position:chr13:13446257-13446050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):126, 0

               
               
               Conread position:275-538
               
               
               Cow position:chr13:32535555-32535828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):123, 103

               
               
               Conread position:276-440
               
               
               Cow position:chr13:29773662-29773496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):111, 125

               
               
               Conread position:276-451
               
               
               Cow position:chr13:8369065-8369230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:276-455
               
               
               Cow position:chr13:16187997-16187819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):121, 0

               
               
               Conread position:276-497
               
               
               Cow position:chr13:4208914-4208694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):119, 22

               
               
               Conread position:276-497
               
               
               Cow position:chr13:4463912-4464127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:175
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):114, 9

               
               
               Conread position:276-497
               
               
               Cow position:chr13:26383336-26383111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):179, 128

               
               
               Conread position:276-540
               
               
               Cow position:chr13:18243761-18244031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):178, 121

               
               
               Conread position:277-496
               
               
               Cow position:chr13:50713110-50713325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:176
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):178, 108

               
               
               Conread position:278-495
               
               
               Cow position:chr13:59687977-59687759 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):166, 111

               
               
               Conread position:279-452
               
               
               Cow position:chr13:9386119-9385952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:279-486
               
               
               Cow position:chr13:7488443-7488651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):175, 63

               
               
               Conread position:280-433
               
               
               Cow position:chr13:12423309-12423463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:280-433
               
               
               Cow position:chr13:19174788-19174636 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):126, 64

               
               
               Conread position:280-434
               
               
               Cow position:chr13:50601799-50601648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:280-435
               
               
               Cow position:chr13:58045865-58045708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:280-442
               
               
               Cow position:chr13:23214921-23215083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):35, 120

               
               
               Conread position:280-456
               
               
               Cow position:chr13:16203572-16203748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):148, 118

               
               
               Conread position:280-456
               
               
               Cow position:chr13:50751153-50750975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:138
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:280-459
               
               
               Cow position:chr13:26720882-26720702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):118, 152

               
               
               Conread position:280-470
               
               
               Cow position:chr13:7998255-7998445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):116, 62

               
               
               Conread position:280-471
               
               
               Cow position:chr13:52070732-52070913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:280-477
               
               
               Cow position:chr13:28689370-28689568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:150
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:280-486
               
               
               Cow position:chr13:27550642-27550851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:161
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:280-496
               
               
               Cow position:chr13:1363597-1363817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):179, 117

               
               
               Conread position:280-496
               
               
               Cow position:chr13:13238480-13238700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):119, 20

               
               
               Conread position:280-496
               
               
               Cow position:chr13:13338759-13338983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:280-496
               
               
               Cow position:chr13:14879048-14878829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):108, 125

               
               
               Conread position:280-496
               
               
               Cow position:chr13:17450999-17451217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):108, 165

               
               
               Conread position:280-496
               
               
               Cow position:chr13:19023945-19023721 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:280-496
               
               
               Cow position:chr13:30651091-30651298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):174, 114

               
               
               Conread position:280-498
               
               
               Cow position:chr13:1155800-1155583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:167
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):208, 62

               
               
               Conread position:280-510
               
               
               Cow position:chr13:41919253-41919020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:163
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):117, 46

               
               
               Conread position:280-540
               
               
               Cow position:chr13:17338332-17338609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):100, 256

               
               
               Conread position:280-540
               
               
               Cow position:chr13:33875578-33875837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):180, 114

               
               
               Conread position:280-540
               
               
               Cow position:chr13:45604513-45604243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:198
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):95, 163

               
               
               Conread position:280-540
               
               
               Cow position:chr13:51015275-51015005 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:195
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):173, 45

               
               
               Conread position:281-496
               
               
               Cow position:chr13:62617726-62617946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):104, 50

               
               
               Conread position:281-540
               
               
               Cow position:chr13:15233830-15234087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:196
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):207, 108

               
               
               Conread position:282-540
               
               
               Cow position:chr13:11955212-11954938 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:211
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):34, 120

               
               
               Conread position:285-429
               
               
               Cow position:chr13:1733218-1733080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:285-430
               
               
               Cow position:chr13:21313765-21313620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):103, 18

               
               
               Conread position:285-441
               
               
               Cow position:chr13:13471506-13471347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):112, 0

               
               
               Conread position:285-456
               
               
               Cow position:chr13:15445945-15446121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:136
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):44, 11

               
               
               Conread position:285-496
               
               
               Cow position:chr13:12045430-12045215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):103, 162

               
               
               Conread position:285-540
               
               
               Cow position:chr13:17613248-17613521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:206
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):43, 252

               
               
               Conread position:285-540
               
               
               Cow position:chr13:52929619-52929875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:193
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):170, 103

               
               
               Conread position:286-496
               
               
               Cow position:chr13:40651843-40652056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):102, 124

               
               
               Conread position:286-540
               
               
               Cow position:chr13:34941741-34941481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:196
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):73, 105

               
               
               Conread position:287-405
               
               
               Cow position:chr13:45130424-45130544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:94
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:287-422
               
               
               Cow position:chr13:53278106-53278243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:106
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):88, 94

               
               
               Conread position:287-451
               
               
               Cow position:chr13:18681197-18681363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):101, 151

               
               
               Conread position:287-481
               
               
               Cow position:chr13:61188443-61188640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):155, 102

               
               
               Conread position:287-482
               
               
               Cow position:chr13:18973536-18973331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):101, 71

               
               
               Conread position:287-486
               
               
               Cow position:chr13:5060657-5060857 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):168, 89

               
               
               Conread position:287-496
               
               
               Cow position:chr13:21269672-21269457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):109, 63

               
               
               Conread position:287-496
               
               
               Cow position:chr13:61047124-61047329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):184, 86

               
               
               Conread position:287-511
               
               
               Cow position:chr13:2822780-2822998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):201, 94

               
               
               Conread position:287-540
               
               
               Cow position:chr13:42113929-42114196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):118, 89

               
               
               Conread position:288-486
               
               
               Cow position:chr13:17855283-17855482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:143
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:288-540
               
               
               Cow position:chr13:52283823-52284084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):87, 156

               
               
               Conread position:289-486
               
               
               Cow position:chr13:38697963-38698164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):102, 116

               
               
               Conread position:289-498
               
               
               Cow position:chr13:19138352-19138563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):55, 112

               
               
               Conread position:289-540
               
               
               Cow position:chr13:53195369-53195117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):168, 89

               
               
               Conread position:291-497
               
               
               Cow position:chr13:61166536-61166334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:168
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):197, 34

               
               
               Conread position:291-510
               
               
               Cow position:chr13:34375173-34375410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:292-446
               
               
               Cow position:chr13:51497889-51497733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):110, 140

               
               
               Conread position:292-516
               
               
               Cow position:chr13:33631046-33631266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:161
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):97, 6

               
               
               Conread position:293-486
               
               
               Cow position:chr13:53536392-53536194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):102, 84

               
               
               Conread position:294-521
               
               
               Cow position:chr13:6835878-6835648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:171
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):23, 33

               
               
               Conread position:295-497
               
               
               Cow position:chr13:12619197-12618990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):98, 182

               
               
               Conread position:296-441
               
               
               Cow position:chr13:3632372-3632515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):102, 121

               
               
               Conread position:296-497
               
               
               Cow position:chr13:13954474-13954264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:297-456
               
               
               Cow position:chr13:10040619-10040456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:128
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):89, 18

               
               
               Conread position:297-458
               
               
               Cow position:chr13:53553342-53553182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:297-483
               
               
               Cow position:chr13:6848846-6849039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:297-486
               
               
               Cow position:chr13:30661925-30662116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):108, 52

               
               
               Conread position:297-496
               
               
               Cow position:chr13:607338-607142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):157, 80

               
               
               Conread position:297-496
               
               
               Cow position:chr13:13306016-13306221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):91, 20

               
               
               Conread position:297-496
               
               
               Cow position:chr13:57448987-57449190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):32, 94

               
               
               Conread position:297-496
               
               
               Cow position:chr13:60340726-60340933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:297-497
               
               
               Cow position:chr13:44626288-44626496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:159
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):91, 141

               
               
               Conread position:297-506
               
               
               Cow position:chr13:20357973-20357762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):35, 102

               
               
               Conread position:297-520
               
               
               Cow position:chr13:11821073-11821302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:166
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):101, 140

               
               
               Conread position:297-540
               
               
               Cow position:chr13:31808441-31808687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:181
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):177, 55

               
               
               Conread position:297-540
               
               
               Cow position:chr13:39232905-39232664 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):158, 99

               
               
               Conread position:298-456
               
               
               Cow position:chr13:26120439-26120284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:298-496
               
               
               Cow position:chr13:7032213-7032410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):98, 115

               
               
               Conread position:298-526
               
               
               Cow position:chr13:60329680-60329906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):146, 16

               
               
               Conread position:298-540
               
               
               Cow position:chr13:58043549-58043804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):89, 169

               
               
               Conread position:299-486
               
               
               Cow position:chr13:49507928-49507737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):156, 0

               
               
               Conread position:299-496
               
               
               Cow position:chr13:46324867-46324662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:301-486
               
               
               Cow position:chr13:34904138-34904319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):63, 96

               
               
               Conread position:301-540
               
               
               Cow position:chr13:21039675-21039423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:192
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):106, 33

               
               
               Conread position:305-453
               
               
               Cow position:chr13:15964244-15964394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:124
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):86, 21

               
               
               Conread position:305-540
               
               
               Cow position:chr13:24376421-24376665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):87, 140

               
               
               Conread position:305-540
               
               
               Cow position:chr13:41253549-41253792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):88, 71

               
               
               Conread position:305-540
               
               
               Cow position:chr13:55295698-55295450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):46, 24

               
               
               Conread position:307-423
               
               
               Cow position:chr13:57445268-57445149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:97
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):81, 29

               
               
               Conread position:307-496
               
               
               Cow position:chr13:53070230-53070047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:146
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):148, 17

               
               
               Conread position:308-425
               
               
               Cow position:chr13:7097862-7097975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:97
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:308-432
               
               
               Cow position:chr13:8367774-8367898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:101
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):9, 90

               
               
               Conread position:308-497
               
               
               Cow position:chr13:10099056-10098867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):150, 7

               
               
               Conread position:308-497
               
               
               Cow position:chr13:21155569-21155369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):31, 175

               
               
               Conread position:311-483
               
               
               Cow position:chr13:20128600-20128774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):145, 86

               
               
               Conread position:311-540
               
               
               Cow position:chr13:2463301-2463054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):88, 226

               
               
               Conread position:313-500
               
               
               Cow position:chr13:16024525-16024718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:160
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:315-507
               
               
               Cow position:chr13:26743065-26743260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:151
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):21, 12

               
               
               Conread position:315-540
               
               
               Cow position:chr13:2192649-2192883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):17, 83

               
               
               Conread position:319-453
               
               
               Cow position:chr13:22227779-22227645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:107
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):82, 58

               
               
               Conread position:320-539
               
               
               Cow position:chr13:30693657-30693875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:166
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):167, 69

               
               
               Conread position:322-540
               
               
               Cow position:chr13:48252027-48251817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:176
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):131, 37

               
               
               Conread position:323-497
               
               
               Cow position:chr13:14870478-14870653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):102, 65

               
               
               Conread position:324-540
               
               
               Cow position:chr13:9107535-9107752 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):66, 140

               
               
               Conread position:325-482
               
               
               Cow position:chr13:32826510-32826348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):70, 153

               
               
               Conread position:325-540
               
               
               Cow position:chr13:1779777-1780008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:174
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):131, 72

               
               
               Conread position:328-525
               
               
               Cow position:chr13:37979212-37979020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):127, 69

               
               
               Conread position:329-539
               
               
               Cow position:chr13:19178224-19178450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:329-539
               
               
               Cow position:chr13:62474847-62474625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):68, 120

               
               
               Conread position:331-497
               
               
               Cow position:chr13:47312871-47313043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:131
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):59, 147

               
               
               Conread position:335-473
               
               
               Cow position:chr13:52003871-52004010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:107
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):58, 71

               
               
               Conread position:335-540
               
               
               Cow position:chr13:30026067-30026287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):55, 199

               
               
               Conread position:337-497
               
               
               Cow position:chr13:36345936-36346095 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):109, 16

               
               
               Conread position:338-474
               
               
               Cow position:chr13:16711588-16711727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:108
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):117, 60

               
               
               Conread position:340-431
               
               
               Cow position:chr13:37562652-37562561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:92
               
               
               Alignm identity:78
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:341-539
               
               
               Cow position:chr13:5752464-5752249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:159
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:344-456
               
               
               Cow position:chr13:13809596-13809482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:93
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:344-497
               
               
               Cow position:chr13:41155067-41154908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:126
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):55, 134

               
               
               Conread position:344-540
               
               
               Cow position:chr13:13265773-13265978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:150
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):49, 89

               
               
               Conread position:345-540
               
               
               Cow position:chr13:5091701-5091486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):49, 24

               
               
               Conread position:346-483
               
               
               Cow position:chr13:322816-322673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):53, 92

               
               
               Conread position:346-540
               
               
               Cow position:chr13:20042001-20041786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):41, 80

               
               
               Conread position:346-540
               
               
               Cow position:chr13:25261843-25261633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:346-540
               
               
               Cow position:chr13:54093714-54093915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:158
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):107, 52

               
               
               Conread position:348-537
               
               
               Cow position:chr13:22775327-22775139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):49, 71

               
               
               Conread position:348-540
               
               
               Cow position:chr13:22779932-22780121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):140, 70

               
               
               Conread position:348-540
               
               
               Cow position:chr13:34052618-34052426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):140, 49

               
               
               Conread position:349-456
               
               
               Cow position:chr13:24066135-24066028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:108
               
               
               Alignm identity:86
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:353-482
               
               
               Cow position:chr13:6113328-6113196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:105
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):70, 86

               
               
               Conread position:353-524
               
               
               Cow position:chr13:37946230-37946051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:138
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):42, 25

               
               
               Conread position:355-497
               
               
               Cow position:chr13:563165-563019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):100, 121

               
               
               Conread position:355-540
               
               
               Cow position:chr13:6975817-6975615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):44, 77

               
               
               Conread position:356-521
               
               
               Cow position:chr13:37980666-37980486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:359-540
               
               
               Cow position:chr13:9884749-9884943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):44, 121

               
               
               Conread position:362-540
               
               
               Cow position:chr13:54237338-54237521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):38, 51

               
               
               Conread position:363-511
               
               
               Cow position:chr13:21193403-21193548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:121
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):124, 34

               
               
               Conread position:365-484
               
               
               Cow position:chr13:55947761-55947883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:100
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):88, 33

               
               
               Conread position:369-539
               
               
               Cow position:chr13:37517145-37516962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:147
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):26, 30

               
               
               Conread position:370-540
               
               
               Cow position:chr13:2339429-2339605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:138
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):114, 27

               
               
               Conread position:377-539
               
               
               Cow position:chr13:24776284-24776453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:131
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):77, 20
Show alignments to all cow chromosomes.
Conread position:	183-451
Cow position:	chr13:8401862-8402130 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	201
Alignm E-value:	7e-40
Alignm gaps (pig, cow):	13, 28
Conread position:	183-540
Cow position:	chr13:47356459-47356802 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	243
Alignm E-value:	8e-30
Alignm gaps (pig, cow):	70, 35
Conread position:	184-340
Cow position:	chr13:20798033-20797879 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	115
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	13, 23
Conread position:	201-497
Cow position:	chr13:49520998-49520698 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	210
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	142, 164
Conread position:	206-378
Cow position:	chr13:43794387-43794555 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	135
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	39, 18
Conread position:	218-486
Cow position:	chr13:57002568-57002840 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	185
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	172, 53
Conread position:	219-357
Cow position:	chr13:11715507-11715645 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	106
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	7, 18
Conread position:	221-327
Cow position:	chr13:20529625-20529517 (view UCSC Genome Browser custom track)
Alignm length:	109
Alignm identity:	89
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	15, 0
Conread position:	221-391
Cow position:	chr13:15069800-15069971 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	134
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	25, 109
Conread position:	222-433
Cow position:	chr13:45108572-45108356 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	156
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	26, 0
Conread position:	225-540
Cow position:	chr13:19033407-19033721 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	225
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	227, 30
Conread position:	227-480
Cow position:	chr13:8362892-8362649 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	195
Alignm E-value:	9.00054e-42
Alignm gaps (pig, cow):	159, 18
Conread position:	228-389
Cow position:	chr13:48465984-48465824 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	128
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	18, 72
Conread position:	228-490
Cow position:	chr13:17110077-17110327 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	191
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	12, 86
Conread position:	228-497
Cow position:	chr13:39826409-39826677 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	192
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	60, 17
Conread position:	230-391
Cow position:	chr13:25941409-25941250 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	116
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	40, 0
Conread position:	230-434
Cow position:	chr13:20401132-20400935 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	156
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	161, 49
Conread position:	230-445
Cow position:	chr13:17563593-17563804 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	173
Alignm E-value:	0
Alignm gaps (pig, cow):	41, 0
Conread position:	230-497
Cow position:	chr13:6087039-6086780 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	191
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	115, 54
Conread position:	230-498
Cow position:	chr13:12408434-12408162 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	182
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	129, 28