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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010H17.5
        

               
Conread position:
               
172-332
               

               
Cow position:
               
chr14:25926491-25926646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
183-374
               

               
Cow position:
               
chr14:12120994-12121189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
205-415
               

               
Cow position:
               
chr14:8006816-8006614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
228-540
               

               
Cow position:
               
chr14:35018843-35018523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
230-355
               

               
Cow position:
               
chr14:18270271-18270396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-477
               

               
Cow position:
               
chr14:27275073-27275322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
230-497
               

               
Cow position:
               
chr14:27848095-27848379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
107, 220
               

               
Conread position:
               
230-511
               

               
Cow position:
               
chr14:38747588-38747861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 100
               

               
Conread position:
               
236-403
               

               
Cow position:
               
chr14:23419711-23419882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chr14:36453702-36453468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
158, 54
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr14:19594220-19593907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 13
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr14:13385286-13385606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
169, 34
               

               
Conread position:
               
239-362
               

               
Cow position:
               
chr14:50519260-50519137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
239-374
               

               
Cow position:
               
chr14:2833490-2833351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
239-451
               

               
Cow position:
               
chr14:29698442-29698227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
240-360
               

               
Cow position:
               
chr14:45167205-45167086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
241-456
               

               
Cow position:
               
chr14:25111421-25111636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
241-477
               

               
Cow position:
               
chr14:14327196-14326950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
65, 166
               

               
Conread position:
               
241-486
               

               
Cow position:
               
chr14:15825203-15825454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
241-498
               

               
Cow position:
               
chr14:21691354-21691091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
135, 44
               

               
Conread position:
               
242-360
               

               
Cow position:
               
chr14:26456295-26456413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-390
               

               
Cow position:
               
chr14:18559138-18558991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
242-403
               

               
Cow position:
               
chr14:28924090-28924250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
242-496
               

               
Cow position:
               
chr14:4109568-4109296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
242-539
               

               
Cow position:
               
chr14:32574084-32574381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 207
               

               
Conread position:
               
244-369
               

               
Cow position:
               
chr14:16207575-16207449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
244-447
               

               
Cow position:
               
chr14:29723661-29723464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
244-459
               

               
Cow position:
               
chr14:23478751-23478960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
209, 81
               

               
Conread position:
               
244-475
               

               
Cow position:
               
chr14:19951490-19951728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
244-480
               

               
Cow position:
               
chr14:46997963-46998209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 150
               

               
Conread position:
               
244-497
               

               
Cow position:
               
chr14:20712763-20712506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
156, 63
               

               
Conread position:
               
244-528
               

               
Cow position:
               
chr14:14182270-14182563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr14:37883992-37883686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr14:45677152-45677456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
245-326
               

               
Cow position:
               
chr14:36151250-36151331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
82
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-327
               

               
Cow position:
               
chr14:25912576-25912658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
83
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-330
               

               
Cow position:
               
chr14:15228465-15228550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-330
               

               
Cow position:
               
chr14:27609095-27609181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
245-332
               

               
Cow position:
               
chr14:33758294-33758382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
245-333
               

               
Cow position:
               
chr14:32784190-32784102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-341
               

               
Cow position:
               
chr14:20010580-20010484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-341
               

               
Cow position:
               
chr14:44153051-44152955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-343
               

               
Cow position:
               
chr14:13176257-13176160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
245-343
               

               
Cow position:
               
chr14:19513619-19513521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-343
               

               
Cow position:
               
chr14:21530148-21530053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-345
               

               
Cow position:
               
chr14:30023272-30023172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-346
               

               
Cow position:
               
chr14:42153479-42153378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-348
               

               
Cow position:
               
chr14:19349761-19349864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-351
               

               
Cow position:
               
chr14:4209431-4209537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-351
               

               
Cow position:
               
chr14:16761685-16761579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-351
               

               
Cow position:
               
chr14:20070996-20071102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-353
               

               
Cow position:
               
chr14:41156799-41156691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-354
               

               
Cow position:
               
chr14:28706970-28707081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
245-355
               

               
Cow position:
               
chr14:25073050-25073160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
245-356
               

               
Cow position:
               
chr14:18412666-18412555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-356
               

               
Cow position:
               
chr14:27303583-27303694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-357
               

               
Cow position:
               
chr14:39422959-39422845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr14:8083124-8083239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr14:11697401-11697515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr14:20736536-20736650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr14:23663478-23663368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr14:24785583-24785698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr14:42276551-42276663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
245-361
               

               
Cow position:
               
chr14:37436785-37436669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-369
               

               
Cow position:
               
chr14:37934042-37934163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
245-371
               

               
Cow position:
               
chr14:20245244-20245118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-372
               

               
Cow position:
               
chr14:36775577-36775701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-373
               

               
Cow position:
               
chr14:21406785-21406657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-373
               

               
Cow position:
               
chr14:27364505-27364631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr14:2981745-2981617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr14:9307991-9308119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr14:15470055-15469928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr14:29734440-29734310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
245-379
               

               
Cow position:
               
chr14:18350932-18350798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-384
               

               
Cow position:
               
chr14:11576995-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
245-385
               

               
Cow position:
               
chr14:18301885-18302026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
245-386
               

               
Cow position:
               
chr14:5959063-5958921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr14:22916365-22916222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr14:22997651-22997508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr14:24712702-24712555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr14:25919779-25919922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr14:30431643-30431499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr14:50146805-50146948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
245-390
               

               
Cow position:
               
chr14:10691703-10691556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr14:10706802-10706945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr14:20349807-20349658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr14:36425482-36425340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr14:606736-606594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr14:12033308-12033169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr14:27733532-27733676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr14:34399873-34399726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-393
               

               
Cow position:
               
chr14:20466862-20467003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
245-394
               

               
Cow position:
               
chr14:26148790-26148641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
245-395
               

               
Cow position:
               
chr14:42339097-42339240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
245-396
               

               
Cow position:
               
chr14:40191518-40191661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
245-397
               

               
Cow position:
               
chr14:13379701-13379550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
245-401
               

               
Cow position:
               
chr14:15428403-15428558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
245-403
               

               
Cow position:
               
chr14:24913799-24913959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
245-404
               

               
Cow position:
               
chr14:16457445-16457603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
149, 73
               

               
Conread position:
               
245-406
               

               
Cow position:
               
chr14:28694791-28694630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-419
               

               
Cow position:
               
chr14:11031356-11031186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
245-420
               

               
Cow position:
               
chr14:13928502-13928671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
245-420
               

               
Cow position:
               
chr14:48900100-48900276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
245-421
               

               
Cow position:
               
chr14:3943625-3943452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
245-423
               

               
Cow position:
               
chr14:11643324-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
245-424
               

               
Cow position:
               
chr14:34449046-34448864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
245-429
               

               
Cow position:
               
chr14:7342388-7342562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
245-429
               

               
Cow position:
               
chr14:25225653-25225840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
245-429
               

               
Cow position:
               
chr14:48744441-48744622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
245-432
               

               
Cow position:
               
chr14:28465290-28465106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 110
               

               
Conread position:
               
245-432
               

               
Cow position:
               
chr14:34096640-34096459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
245-441
               

               
Cow position:
               
chr14:10693329-10693138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr14:1796118-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 27
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr14:12342913-12342706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr14:36443093-36442895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
245-445
               

               
Cow position:
               
chr14:4282581-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 82
               

               
Conread position:
               
245-449
               

               
Cow position:
               
chr14:12924225-12924423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
245-450
               

               
Cow position:
               
chr14:40002052-40001849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
245-452
               

               
Cow position:
               
chr14:12634956-12634755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr14:1708731-1708521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
152, 166
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr14:6226688-6226491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr14:7036432-7036219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr14:11470222-11470013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr14:12954457-12954248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr14:42436950-42437161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 102
               

               
Conread position:
               
245-459
               

               
Cow position:
               
chr14:16524392-16524611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 196
               

               
Conread position:
               
245-462
               

               
Cow position:
               
chr14:24945567-24945349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 188
               

               
Conread position:
               
245-466
               

               
Cow position:
               
chr14:19359812-19360044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 193
               

               
Conread position:
               
245-473
               

               
Cow position:
               
chr14:10078192-10078426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr14:35503285-35503523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr14:50362719-50362952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
141, 199
               

               
Conread position:
               
245-476
               

               
Cow position:
               
chr14:21535381-21535161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
198, 139
               

               
Conread position:
               
245-476
               

               
Cow position:
               
chr14:32553381-32553150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
245-476
               

               
Cow position:
               
chr14:40754322-40754085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr14:27823357-27823593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr14:45045524-45045762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
245-478
               

               
Cow position:
               
chr14:28378284-28378522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr14:34199918-34199684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 144
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr14:34331401-34331161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr14:46654616-46654380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
210, 20
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr14:5222357-5222121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr14:45718338-45718099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
245-484
               

               
Cow position:
               
chr14:44257849-44258091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr14:20110797-20110554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
143, 176
               

               
Conread position:
               
245-490
               

               
Cow position:
               
chr14:33791117-33791358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
203, 39
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr14:19618825-19618576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr14:48772830-48773078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
208, 33
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr14:12035336-12035587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 9
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr14:21933418-21933162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 185
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr14:37131587-37131834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr14:29632955-29632706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr14:49824694-49824446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 82
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:9837969-9837713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 191
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:16032937-16033189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:16256684-16256947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 238
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:18345802-18345553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:19188968-19189217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:26433315-26433063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:28795597-28795854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:40283543-40283801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:44084564-44084298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 242
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr14:48838522-48838776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
245-499
               

               
Cow position:
               
chr14:25903456-25903707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
185, 148
               

               
Conread position:
               
245-500
               

               
Cow position:
               
chr14:1859687-1859430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
245-500
               

               
Cow position:
               
chr14:25681852-25682115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
245-511
               

               
Cow position:
               
chr14:41479737-41479462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
147, 160
               

               
Conread position:
               
245-516
               

               
Cow position:
               
chr14:1646259-1645989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
245-516
               

               
Cow position:
               
chr14:1868458-1868180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 138
               

               
Conread position:
               
245-516
               

               
Cow position:
               
chr14:27312338-27312629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
245-521
               

               
Cow position:
               
chr14:38920877-38921157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
245-522
               

               
Cow position:
               
chr14:16550078-16549800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 151
               

               
Conread position:
               
245-528
               

               
Cow position:
               
chr14:48740942-48740657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 16
               

               
Conread position:
               
245-533
               

               
Cow position:
               
chr14:39618451-39618150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
159, 196
               

               
Conread position:
               
245-536
               

               
Cow position:
               
chr14:4227297-4226982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
245-537
               

               
Cow position:
               
chr14:20016782-20016477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
245-537
               

               
Cow position:
               
chr14:23761815-23762104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
155, 60
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr14:39926135-39926422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
243, 16
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr14:42330280-42330585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr14:4990927-4991225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 204
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr14:9901109-9901402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
156, 58
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr14:14316812-14317097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 87
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr14:27592031-27591723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr14:44848445-44848152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:6175522-6175816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
210, 60
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:7959712-7959998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 83
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:10609605-10609922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 209
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:13845911-13846219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
185, 25
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:14417571-14417273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:14466531-14466246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
209, 83
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:15055066-15054753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
139, 231
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:19129431-19129744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 292
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:19372264-19372576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 156
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:19863509-19863207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 281
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:20600310-20600614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:20640705-20640391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:21357483-21357785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:22583080-22583372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:22988959-22989267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
156, 106
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:26442415-26442105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 82
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:31130450-31130156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:32371815-32371510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
209, 76
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:33247504-33247205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 144
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:34983792-34984097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 142
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:35381517-35381821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 40
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:35420839-35420524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:39037151-39037462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:40230710-40230404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
144, 113
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:42155049-42154728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr14:50589471-50589157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
246-341
               

               
Cow position:
               
chr14:24806523-24806615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
246-359
               

               
Cow position:
               
chr14:24580567-24580679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
246-369
               

               
Cow position:
               
chr14:15211857-15211975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
246-374
               

               
Cow position:
               
chr14:11567331-11567459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-388
               

               
Cow position:
               
chr14:26918926-26919065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
246-390
               

               
Cow position:
               
chr14:4848274-4848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
246-394
               

               
Cow position:
               
chr14:23078866-23078718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-396
               

               
Cow position:
               
chr14:13731174-13731021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
246-406
               

               
Cow position:
               
chr14:20481914-20481754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
140, 67
               

               
Conread position:
               
246-407
               

               
Cow position:
               
chr14:45577166-45577005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-412
               

               
Cow position:
               
chr14:3779261-3779430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
246-418
               

               
Cow position:
               
chr14:27044846-27044675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 159
               

               
Conread position:
               
246-419
               

               
Cow position:
               
chr14:41191169-41190985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
246-427
               

               
Cow position:
               
chr14:47170427-47170247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
246-438
               

               
Cow position:
               
chr14:12141987-12141776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
246-456
               

               
Cow position:
               
chr14:11056804-11056604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
246-456
               

               
Cow position:
               
chr14:41302904-41302697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
246-456
               

               
Cow position:
               
chr14:48496218-48496013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr14:17238287-17238512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr14:22941802-22941561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
246-483
               

               
Cow position:
               
chr14:49817759-49817534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr14:3194792-3195029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
242, 74
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr14:4203172-4202912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr14:5630089-5630342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr14:32452175-32452434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
246-499
               

               
Cow position:
               
chr14:46125344-46125086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
246-529
               

               
Cow position:
               
chr14:8786620-8786332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 15
               

               
Conread position:
               
246-537
               

               
Cow position:
               
chr14:12244459-12244152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
246-538
               

               
Cow position:
               
chr14:43046094-43046375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
212, 31
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:7695192-7695483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:8541285-8540983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 22
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:9019958-9020260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:14187257-14187566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:14622250-14621951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 98
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:18309381-18309077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 264
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:19852007-19851695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:21964063-21964353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
209, 79
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:22381647-22381322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:38144181-38143880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 142
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:41127835-41128126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
214, 20
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr14:48427000-48427309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
141, 81
               

               
Conread position:
               
247-390
               

               
Cow position:
               
chr14:16749757-16749615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
247-396
               

               
Cow position:
               
chr14:18941358-18941210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
247-402
               

               
Cow position:
               
chr14:5355098-5354942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
247-412
               

               
Cow position:
               
chr14:31138813-31138646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
247-414
               

               
Cow position:
               
chr14:34775819-34775654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
247-422
               

               
Cow position:
               
chr14:44713346-44713518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 144
               

               
Conread position:
               
247-425
               

               
Cow position:
               
chr14:23104072-23103891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
247-427
               

               
Cow position:
               
chr14:7198425-7198610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
247-434
               

               
Cow position:
               
chr14:29964947-29965131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
247-450
               

               
Cow position:
               
chr14:11285507-11285705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
147, 87
               

               
Conread position:
               
247-451
               

               
Cow position:
               
chr14:18763506-18763313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr14:26655207-26654996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
178, 169
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr14:37422855-37422652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 54
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr14:42419346-42419138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
247-459
               

               
Cow position:
               
chr14:40474492-40474700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
247-469
               

               
Cow position:
               
chr14:11729183-11728961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 142
               

               
Conread position:
               
247-474
               

               
Cow position:
               
chr14:30756771-30757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
208, 74
               

               
Conread position:
               
247-476
               

               
Cow position:
               
chr14:15504229-15504000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
247-482
               

               
Cow position:
               
chr14:3949174-3948936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 190
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr14:12511969-12511732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 56
               

               
Conread position:
               
247-492
               

               
Cow position:
               
chr14:33341687-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
247-495
               

               
Cow position:
               
chr14:36166870-36167117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 44
               

               
Conread position:
               
247-496
               

               
Cow position:
               
chr14:2975157-2974915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
247-496
               

               
Cow position:
               
chr14:26115989-26116241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
247-496
               

               
Cow position:
               
chr14:30605988-30605739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr14:1803190-1802934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr14:24922027-24922284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr14:25986442-25986698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr14:28304857-28304608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr14:33830229-33830478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 78
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr14:39434330-39434079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
247-498
               

               
Cow position:
               
chr14:26628596-26628342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
247-498
               

               
Cow position:
               
chr14:30017358-30017108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
247-500
               

               
Cow position:
               
chr14:29590681-29590437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr14:33457115-33456845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
247-529
               

               
Cow position:
               
chr14:9539258-9538972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
247-537
               

               
Cow position:
               
chr14:45052370-45052668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 137
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr14:12520375-12520076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 157
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr14:13582825-13582527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
158, 256
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr14:24387368-24387684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
248-424
               

               
Cow position:
               
chr14:49487889-49488065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
248-431
               

               
Cow position:
               
chr14:16340925-16341104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
142, 37
               

               
Conread position:
               
248-498
               

               
Cow position:
               
chr14:10702910-10702651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
248-499
               

               
Cow position:
               
chr14:18657679-18657420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
143, 114
               

               
Conread position:
               
248-540
               

               
Cow position:
               
chr14:6600025-6599721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
248-540
               

               
Cow position:
               
chr14:17755496-17755791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
210, 124
               

               
Conread position:
               
248-540
               

               
Cow position:
               
chr14:41749831-41749530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
183, 115
               

               
Conread position:
               
249-327
               

               
Cow position:
               
chr14:21538507-21538429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
79
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-353
               

               
Cow position:
               
chr14:3173808-3173704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-354
               

               
Cow position:
               
chr14:47224436-47224332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
249-360
               

               
Cow position:
               
chr14:38673990-38673881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
249-365
               

               
Cow position:
               
chr14:32753831-32753719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
249-370
               

               
Cow position:
               
chr14:7127787-7127908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-371
               

               
Cow position:
               
chr14:4860432-4860553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
249-376
               

               
Cow position:
               
chr14:48213011-48213136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
249-390
               

               
Cow position:
               
chr14:16310431-16310572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-392
               

               
Cow position:
               
chr14:11975803-11975664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
249-393
               

               
Cow position:
               
chr14:49940940-49941081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
249-413
               

               
Cow position:
               
chr14:25333988-25334152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-418
               

               
Cow position:
               
chr14:19487224-19487386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
249-423
               

               
Cow position:
               
chr14:15039684-15039508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 107
               

               
Conread position:
               
249-424
               

               
Cow position:
               
chr14:41837943-41837768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-427
               

               
Cow position:
               
chr14:25228073-25228245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
249-427
               

               
Cow position:
               
chr14:37901924-37902107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
249-433
               

               
Cow position:
               
chr14:5557192-5557006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
249-433
               

               
Cow position:
               
chr14:8923655-8923471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
143, 158
               

               
Conread position:
               
249-439
               

               
Cow position:
               
chr14:19959805-19959616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 170
               

               
Conread position:
               
249-455
               

               
Cow position:
               
chr14:6541797-6541589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr14:41253063-41252853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
249-476
               

               
Cow position:
               
chr14:23424191-23424417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 28
               

               
Conread position:
               
249-476
               

               
Cow position:
               
chr14:23442952-23443178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 28
               

               
Conread position:
               
249-496
               

               
Cow position:
               
chr14:7582520-7582271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:8101722-8101970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 73
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:13042687-13042937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:13809869-13810119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 108
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:16760328-16760577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:25385957-25385707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:28003897-28004158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:31784898-31785150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:36254767-36254526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
214, 132
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:37679074-37678821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:38355117-38355366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
149, 104
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:41210783-41211034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:41966160-41966421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr14:47027442-47027190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr14:19321576-19321324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
249-511
               

               
Cow position:
               
chr14:42246934-42247186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
206, 111
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr14:7648090-7647834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
206, 129
               

               
Conread position:
               
249-529
               

               
Cow position:
               
chr14:17841362-17841073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
249-530
               

               
Cow position:
               
chr14:45605027-45605313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
150, 52
               

               
Conread position:
               
249-533
               

               
Cow position:
               
chr14:20826420-20826698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
204, 35
               

               
Conread position:
               
249-535
               

               
Cow position:
               
chr14:21018043-21018340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
249-537
               

               
Cow position:
               
chr14:33751467-33751741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
132, 65
               

               
Conread position:
               
249-538
               

               
Cow position:
               
chr14:37447534-37447246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 83
               

               
Conread position:
               
249-539
               

               
Cow position:
               
chr14:33714744-33714456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr14:16834251-16834563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 239
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr14:24981388-24981687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 76
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr14:26490815-26490511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr14:28115257-28114950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr14:47672952-47672649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 101
               

               
Conread position:
               
250-375
               

               
Cow position:
               
chr14:40287522-40287647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr14:25824626-25824795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
250-432
               

               
Cow position:
               
chr14:47510890-47511069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 78
               

               
Conread position:
               
250-433
               

               
Cow position:
               
chr14:25381362-25381534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
250-433
               

               
Cow position:
               
chr14:40208826-40209013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
250-437
               

               
Cow position:
               
chr14:10851961-10852149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
250-443
               

               
Cow position:
               
chr14:41267802-41267628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
250-492
               

               
Cow position:
               
chr14:48961512-48961755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
214, 78
               

               
Conread position:
               
250-495
               

               
Cow position:
               
chr14:40432855-40433099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
250-497
               

               
Cow position:
               
chr14:4877299-4877050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
250-497
               

               
Cow position:
               
chr14:19394293-19394541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 56
               

               
Conread position:
               
250-497
               

               
Cow position:
               
chr14:36555216-36554974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
205, 43
               

               
Conread position:
               
250-498
               

               
Cow position:
               
chr14:23107251-23107511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
250-498
               

               
Cow position:
               
chr14:26108561-26108815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
250-516
               

               
Cow position:
               
chr14:9308160-9308423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 98
               

               
Conread position:
               
250-517
               

               
Cow position:
               
chr14:27076907-27077186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 200
               

               
Conread position:
               
250-527
               

               
Cow position:
               
chr14:33309573-33309293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 134
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr14:16352279-16352555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr14:37155808-37156101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr14:49021968-49021666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 63
               

               
Conread position:
               
251-393
               

               
Cow position:
               
chr14:42439978-42439839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
122, 101
               

               
Conread position:
               
251-458
               

               
Cow position:
               
chr14:47252298-47252087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
251-475
               

               
Cow position:
               
chr14:1868869-1868643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
251-477
               

               
Cow position:
               
chr14:26097762-26097535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 193
               

               
Conread position:
               
251-496
               

               
Cow position:
               
chr14:25779033-25779271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 104
               

               
Conread position:
               
251-538
               

               
Cow position:
               
chr14:49086238-49086536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
204, 81
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr14:6735932-6735633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr14:13426781-13427052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
237, 77
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr14:25399001-25399179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
252-434
               

               
Cow position:
               
chr14:43192781-43192952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr14:45312728-45312928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
184, 82
               

               
Conread position:
               
252-479
               

               
Cow position:
               
chr14:33553116-33553344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
252-497
               

               
Cow position:
               
chr14:37884478-37884232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
252-497
               

               
Cow position:
               
chr14:46685239-46685479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
205, 47
               

               
Conread position:
               
252-497
               

               
Cow position:
               
chr14:48412950-48412699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 222
               

               
Conread position:
               
252-540
               

               
Cow position:
               
chr14:1978141-1977846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
252-540
               

               
Cow position:
               
chr14:39778684-39778986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 200
               

               
Conread position:
               
252-540
               

               
Cow position:
               
chr14:40165357-40165654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 26
               

               
Conread position:
               
253-352
               

               
Cow position:
               
chr14:17092110-17092013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
253-486
               

               
Cow position:
               
chr14:40269908-40269675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
202, 95
               

               
Conread position:
               
253-516
               

               
Cow position:
               
chr14:50055332-50055597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 15
               

               
Conread position:
               
254-424
               

               
Cow position:
               
chr14:39095244-39095077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
141, 75
               

               
Conread position:
               
254-427
               

               
Cow position:
               
chr14:803620-803794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
254-535
               

               
Cow position:
               
chr14:34355776-34355471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
254-539
               

               
Cow position:
               
chr14:33300638-33300914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
187, 77
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr14:34083230-34082922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
255-374
               

               
Cow position:
               
chr14:1431894-1431778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
255-402
               

               
Cow position:
               
chr14:38286040-38285888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 117
               

               
Conread position:
               
255-428
               

               
Cow position:
               
chr14:7636564-7636387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
255-432
               

               
Cow position:
               
chr14:41486324-41486148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
255-493
               

               
Cow position:
               
chr14:38338198-38337970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
205, 40
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr14:10631185-10630944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
5, 120
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr14:15492528-15492777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 224
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr14:15997830-15997586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 182
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr14:24607897-24608147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr14:24796493-24796246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr14:33774112-33773873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
115, 77
               

               
Conread position:
               
255-539
               

               
Cow position:
               
chr14:39775115-39774823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr14:8750012-8750307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr14:16237577-16237273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr14:2038872-2038690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
256-447
               

               
Cow position:
               
chr14:12127474-12127285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
256-497
               

               
Cow position:
               
chr14:36709060-36709301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
256-535
               

               
Cow position:
               
chr14:36289862-36289581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr14:20385049-20384750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 276
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr14:23712618-23712919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr14:30661934-30662220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
199, 35
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr14:39770291-39769997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
257-377
               

               
Cow position:
               
chr14:15491093-15491214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr14:18904669-18904430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr14:38168629-38168862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 157
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr14:5835849-5836133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
131, 61
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr14:8784138-8784412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
198, 40
               

               
Conread position:
               
258-390
               

               
Cow position:
               
chr14:12002841-12002965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
258-391
               

               
Cow position:
               
chr14:25954258-25954129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
258-392
               

               
Cow position:
               
chr14:33643898-33644029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
258-404
               

               
Cow position:
               
chr14:24839719-24839864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
258-424
               

               
Cow position:
               
chr14:27999097-27998937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
258-433
               

               
Cow position:
               
chr14:1715670-1715840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
258-447
               

               
Cow position:
               
chr14:12081197-12081011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 140
               

               
Conread position:
               
258-484
               

               
Cow position:
               
chr14:49421866-49421640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
258-501
               

               
Cow position:
               
chr14:35544566-35544335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
134, 67
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr14:25403997-25403711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 156
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr14:40033933-40034203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
229, 70
               

               
Conread position:
               
259-355
               

               
Cow position:
               
chr14:24986694-24986598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr14:10697562-10697293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
240, 11
               

               
Conread position:
               
260-474
               

               
Cow position:
               
chr14:49767403-49767614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 166
               

               
Conread position:
               
260-497
               

               
Cow position:
               
chr14:27791483-27791708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
261-497
               

               
Cow position:
               
chr14:5572883-5573123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr14:10858373-10858664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr14:23682203-23682497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 212
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr14:24236765-24237058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
262-496
               

               
Cow position:
               
chr14:48689473-48689706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
167, 8
               

               
Conread position:
               
262-497
               

               
Cow position:
               
chr14:20932559-20932796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
262-497
               

               
Cow position:
               
chr14:24416819-24417065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 169
               

               
Conread position:
               
263-454
               

               
Cow position:
               
chr14:41180771-41180575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
263-455
               

               
Cow position:
               
chr14:41472027-41471837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
263-485
               

               
Cow position:
               
chr14:34125240-34125011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
263-496
               

               
Cow position:
               
chr14:11043547-11043313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
263-512
               

               
Cow position:
               
chr14:46973382-46973635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
264-434
               

               
Cow position:
               
chr14:3498749-3498920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
129, 142
               

               
Conread position:
               
264-497
               

               
Cow position:
               
chr14:11615277-11615041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 138
               

               
Conread position:
               
264-498
               

               
Cow position:
               
chr14:22459914-22459694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
224, 39
               

               
Conread position:
               
265-540
               

               
Cow position:
               
chr14:12856545-12856829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
267-473
               

               
Cow position:
               
chr14:5633998-5633781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
267-483
               

               
Cow position:
               
chr14:2189578-2189798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
267-540
               

               
Cow position:
               
chr14:33643829-33643558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
268-496
               

               
Cow position:
               
chr14:25378546-25378314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
268-497
               

               
Cow position:
               
chr14:25001983-25002215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
130, 207
               

               
Conread position:
               
269-402
               

               
Cow position:
               
chr14:3665754-3665894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
269-527
               

               
Cow position:
               
chr14:32732701-32732969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
269-540
               

               
Cow position:
               
chr14:21284576-21284863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
270-431
               

               
Cow position:
               
chr14:42480267-42480108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
270-540
               

               
Cow position:
               
chr14:22966706-22966985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
270-540
               

               
Cow position:
               
chr14:38378966-38379252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
271-540
               

               
Cow position:
               
chr14:42784914-42785172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
272-425
               

               
Cow position:
               
chr14:20051075-20050923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
274-540
               

               
Cow position:
               
chr14:33338522-33338248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
275-397
               

               
Cow position:
               
chr14:32018064-32018185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
275-414
               

               
Cow position:
               
chr14:7326587-7326445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
277-511
               

               
Cow position:
               
chr14:28987661-28987890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
211, 51
               

               
Conread position:
               
279-394
               

               
Cow position:
               
chr14:26499564-26499679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
279-496
               

               
Cow position:
               
chr14:40329402-40329624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
280-423
               

               
Cow position:
               
chr14:24527202-24527058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
280-428
               

               
Cow position:
               
chr14:12146520-12146371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
280-441
               

               
Cow position:
               
chr14:39415121-39415279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
280-447
               

               
Cow position:
               
chr14:13465257-13465090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
280-454
               

               
Cow position:
               
chr14:28153784-28153612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
280-458
               

               
Cow position:
               
chr14:47584701-47584518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
280-462
               

               
Cow position:
               
chr14:12855829-12855652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
280-486
               

               
Cow position:
               
chr14:47276737-47276535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
180, 115
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr14:8946124-8945901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
128, 108
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr14:11810598-11810391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
193, 65
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr14:12667689-12667912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
135, 105
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr14:14949253-14949030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
116, 127
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr14:41809693-41809474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
175, 72
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr14:47609622-47609410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 137
               

               
Conread position:
               
280-497
               

               
Cow position:
               
chr14:26191144-26190918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
280-511
               

               
Cow position:
               
chr14:20010351-20010114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 195
               

               
Conread position:
               
280-538
               

               
Cow position:
               
chr14:44557855-44557604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr14:15913579-15913318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
177, 76
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr14:27919773-27919505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
281-540
               

               
Cow position:
               
chr14:3564245-3564508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 104
               

               
Conread position:
               
281-540
               

               
Cow position:
               
chr14:41325486-41325204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
99, 268
               

               
Conread position:
               
284-428
               

               
Cow position:
               
chr14:2345031-2345177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
285-430
               

               
Cow position:
               
chr14:19939090-19939236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
285-437
               

               
Cow position:
               
chr14:46061907-46062064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
285-520
               

               
Cow position:
               
chr14:3162692-3162916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
106, 134
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chr14:29029795-29030012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
287-428
               

               
Cow position:
               
chr14:18411819-18411675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
287-444
               

               
Cow position:
               
chr14:49713945-49714103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
287-458
               

               
Cow position:
               
chr14:20954651-20954824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr14:18485286-18485064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr14:37103177-37103390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
107, 150
               

               
Conread position:
               
287-540
               

               
Cow position:
               
chr14:14979745-14979470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 254
               

               
Conread position:
               
288-474
               

               
Cow position:
               
chr14:28803772-28803590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
288-478
               

               
Cow position:
               
chr14:26222704-26222906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
288-494
               

               
Cow position:
               
chr14:43249556-43249760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 93
               

               
Conread position:
               
297-391
               

               
Cow position:
               
chr14:18717250-18717344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-424
               

               
Cow position:
               
chr14:15404674-15404802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
297-434
               

               
Cow position:
               
chr14:15306147-15306009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
297-482
               

               
Cow position:
               
chr14:49929767-49929573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
297-483
               

               
Cow position:
               
chr14:40486663-40486487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
297-496
               

               
Cow position:
               
chr14:27338318-27338524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
297-498
               

               
Cow position:
               
chr14:27305121-27305335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
297-537
               

               
Cow position:
               
chr14:19851049-19850802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr14:3868451-3868197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr14:36437509-36437253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 235
               

               
Conread position:
               
298-445
               

               
Cow position:
               
chr14:27504260-27504106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
298-482
               

               
Cow position:
               
chr14:47591935-47591753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
298-540
               

               
Cow position:
               
chr14:25231672-25231416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 183
               

               
Conread position:
               
299-496
               

               
Cow position:
               
chr14:15313540-15313734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
299-540
               

               
Cow position:
               
chr14:7290779-7291028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
177, 63
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr14:8867580-8867380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
154, 86
               

               
Conread position:
               
302-482
               

               
Cow position:
               
chr14:17830894-17831076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 147
               

               
Conread position:
               
303-433
               

               
Cow position:
               
chr14:33568968-33569096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
303-486
               

               
Cow position:
               
chr14:23080785-23080595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 177
               

               
Conread position:
               
307-434
               

               
Cow position:
               
chr14:37866286-37866158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
307-456
               

               
Cow position:
               
chr14:11846482-11846631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
309-540
               

               
Cow position:
               
chr14:15032745-15032988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
309-540
               

               
Cow position:
               
chr14:42596372-42596613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
311-540
               

               
Cow position:
               
chr14:33538945-33538693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
81, 231
               

               
Conread position:
               
312-540
               

               
Cow position:
               
chr14:44742389-44742148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
313-540
               

               
Cow position:
               
chr14:12324412-12324657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 224
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr14:33326400-33326160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
316-540
               

               
Cow position:
               
chr14:13006500-13006739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
316-540
               

               
Cow position:
               
chr14:17899478-17899717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
320-485
               

               
Cow position:
               
chr14:24684132-24683961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
321-540
               

               
Cow position:
               
chr14:33828163-33828384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 76
               

               
Conread position:
               
322-536
               

               
Cow position:
               
chr14:7558439-7558202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr14:31734853-31734620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
323-539
               

               
Cow position:
               
chr14:41756267-41756491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
132, 60
               

               
Conread position:
               
325-482
               

               
Cow position:
               
chr14:22473008-22472846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
325-540
               

               
Cow position:
               
chr14:35498500-35498268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
335-497
               

               
Cow position:
               
chr14:14580884-14581047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
336-516
               

               
Cow position:
               
chr14:7482072-7482256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
339-511
               

               
Cow position:
               
chr14:8964567-8964738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
149, 97
               

               
Conread position:
               
339-539
               

               
Cow position:
               
chr14:44234159-44233951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
339-540
               

               
Cow position:
               
chr14:11820101-11819891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
340-540
               

               
Cow position:
               
chr14:20483437-20483234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
341-456
               

               
Cow position:
               
chr14:16761548-16761437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
345-540
               

               
Cow position:
               
chr14:8754344-8754559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
345-540
               

               
Cow position:
               
chr14:33209326-33209126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
346-466
               

               
Cow position:
               
chr14:20914665-20914549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
346-486
               

               
Cow position:
               
chr14:23591260-23591403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
346-519
               

               
Cow position:
               
chr14:24991848-24992030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr14:7270977-7270783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr14:19221904-19222115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr14:24580954-24581157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr14:24785971-24786166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
348-486
               

               
Cow position:
               
chr14:3836148-3836284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
348-540
               

               
Cow position:
               
chr14:15518348-15518141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
349-497
               

               
Cow position:
               
chr14:39422564-39422409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
349-521
               

               
Cow position:
               
chr14:40347132-40346956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
350-535
               

               
Cow position:
               
chr14:6419272-6419083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr14:12250164-12249963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
353-486
               

               
Cow position:
               
chr14:37467729-37467592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
353-540
               

               
Cow position:
               
chr14:11748877-11748688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
353-540
               

               
Cow position:
               
chr14:37435270-37435063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
355-497
               

               
Cow position:
               
chr14:19513378-19513238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
361-540
               

               
Cow position:
               
chr14:10721687-10721502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
368-540
               

               
Cow position:
               
chr14:10912918-10912740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
379-540
               

               
Cow position:
               
chr14:22952933-22952765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
384-524
               

               
Cow position:
               
chr14:42277008-42277160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
397-540
               

               
Cow position:
               
chr14:12484224-12484070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
6, 78
               

               
Conread position:
               
409-538
               

               
Cow position:
               
chr14:8006238-8006105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 95
               
Show alignments to all cow chromosomes.