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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010H17.5
        

               
Conread position:
               
183-420
               

               
Cow position:
               
chr20:34846613-34846849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
218-497
               

               
Cow position:
               
chr20:22978517-22978225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 267
               

               
Conread position:
               
221-451
               

               
Cow position:
               
chr20:34397233-34397458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
222-451
               

               
Cow position:
               
chr20:4786832-4787059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
224-416
               

               
Cow position:
               
chr20:35741951-35741755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
225-360
               

               
Cow position:
               
chr20:2487323-2487190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
225-498
               

               
Cow position:
               
chr20:1576277-1576002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
227-497
               

               
Cow position:
               
chr20:35797788-35797513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
228-389
               

               
Cow position:
               
chr20:36806699-36806537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
230-343
               

               
Cow position:
               
chr20:19090965-19091079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
230-540
               

               
Cow position:
               
chr20:12420445-12420768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
231-540
               

               
Cow position:
               
chr20:9412663-9412345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 187
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr20:26077251-26076940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 138
               

               
Conread position:
               
237-497
               

               
Cow position:
               
chr20:15565661-15565923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 70
               

               
Conread position:
               
238-539
               

               
Cow position:
               
chr20:40127176-40127482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
121, 152
               

               
Conread position:
               
239-364
               

               
Cow position:
               
chr20:26059064-26059190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
239-381
               

               
Cow position:
               
chr20:28899267-28899118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
239-498
               

               
Cow position:
               
chr20:40511589-40511854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
241-350
               

               
Cow position:
               
chr20:18396089-18395980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
241-357
               

               
Cow position:
               
chr20:3359167-3359284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
241-497
               

               
Cow position:
               
chr20:13994977-13994717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
241-516
               

               
Cow position:
               
chr20:311484-311229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
247, 77
               

               
Conread position:
               
242-410
               

               
Cow position:
               
chr20:27624171-27624005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
243-455
               

               
Cow position:
               
chr20:21204518-21204310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
244-340
               

               
Cow position:
               
chr20:15547351-15547255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-358
               

               
Cow position:
               
chr20:26930370-26930256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-377
               

               
Cow position:
               
chr20:19636015-19636148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-486
               

               
Cow position:
               
chr20:26077507-26077741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
205, 142
               

               
Conread position:
               
244-527
               

               
Cow position:
               
chr20:19459504-19459791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 200
               

               
Conread position:
               
245-331
               

               
Cow position:
               
chr20:36023240-36023326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-333
               

               
Cow position:
               
chr20:26387621-26387533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-340
               

               
Cow position:
               
chr20:6849054-6848960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
245-340
               

               
Cow position:
               
chr20:37358016-37357921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-341
               

               
Cow position:
               
chr20:15515280-15515376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-342
               

               
Cow position:
               
chr20:24392340-24392245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
245-348
               

               
Cow position:
               
chr20:13617386-13617283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-350
               

               
Cow position:
               
chr20:2823030-2822925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-351
               

               
Cow position:
               
chr20:15846915-15846809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-353
               

               
Cow position:
               
chr20:20312350-20312458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-356
               

               
Cow position:
               
chr20:9034059-9034167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
245-357
               

               
Cow position:
               
chr20:8021286-8021174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-357
               

               
Cow position:
               
chr20:23936025-23936136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
245-358
               

               
Cow position:
               
chr20:396966-396856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-359
               

               
Cow position:
               
chr20:7622823-7622935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
245-359
               

               
Cow position:
               
chr20:20590141-20590255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr20:7934442-7934329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr20:24002761-24002646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-362
               

               
Cow position:
               
chr20:2148033-2148149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
245-363
               

               
Cow position:
               
chr20:2316265-2316383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-365
               

               
Cow position:
               
chr20:27315137-27315022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
245-366
               

               
Cow position:
               
chr20:26040936-26041059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
245-366
               

               
Cow position:
               
chr20:36671273-36671393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
245-372
               

               
Cow position:
               
chr20:34372544-34372669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
103, 82
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr20:17370094-17370220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr20:36312348-36312477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr20:39268926-39269054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
245-380
               

               
Cow position:
               
chr20:11444235-11444104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-383
               

               
Cow position:
               
chr20:24314874-24315011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr20:3148844-3148700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr20:5703632-5703485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
245-391
               

               
Cow position:
               
chr20:15530020-15529875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr20:35444943-35445090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-393
               

               
Cow position:
               
chr20:23590589-23590735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
245-394
               

               
Cow position:
               
chr20:13943918-13943776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
245-397
               

               
Cow position:
               
chr20:33623395-33623544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
245-401
               

               
Cow position:
               
chr20:8619990-8620146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
245-401
               

               
Cow position:
               
chr20:20158296-20158140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-409
               

               
Cow position:
               
chr20:17388692-17388521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
245-414
               

               
Cow position:
               
chr20:1824468-1824641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
245-414
               

               
Cow position:
               
chr20:41473583-41473749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
245-417
               

               
Cow position:
               
chr20:18831718-18831887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
245-420
               

               
Cow position:
               
chr20:35460374-35460556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
245-421
               

               
Cow position:
               
chr20:16291848-16291678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
245-425
               

               
Cow position:
               
chr20:5365086-5364911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
143, 87
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr20:7756466-7756646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
245-430
               

               
Cow position:
               
chr20:26723521-26723699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
245-434
               

               
Cow position:
               
chr20:13034168-13034352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
245-434
               

               
Cow position:
               
chr20:19060679-19060868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
102, 82
               

               
Conread position:
               
245-434
               

               
Cow position:
               
chr20:21815721-21815532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
157, 171
               

               
Conread position:
               
245-441
               

               
Cow position:
               
chr20:29990288-29990478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr20:40158060-40157864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
245-451
               

               
Cow position:
               
chr20:38514938-38514736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
245-451
               

               
Cow position:
               
chr20:39016712-39016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr20:11008330-11008120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
139, 191
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr20:21345593-21345377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr20:30119419-30119624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
245-458
               

               
Cow position:
               
chr20:354741-354949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
245-460
               

               
Cow position:
               
chr20:5702884-5702668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 201
               

               
Conread position:
               
245-462
               

               
Cow position:
               
chr20:22030478-22030260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
245-465
               

               
Cow position:
               
chr20:12239523-12239747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
245-471
               

               
Cow position:
               
chr20:14564211-14563984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
209, 158
               

               
Conread position:
               
245-473
               

               
Cow position:
               
chr20:10996269-10996037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 53
               

               
Conread position:
               
245-473
               

               
Cow position:
               
chr20:21428319-21428094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
245-473
               

               
Cow position:
               
chr20:21721370-21721164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
245-476
               

               
Cow position:
               
chr20:31289664-31289431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr20:8821578-8821794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
211, 72
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr20:11135593-11135832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 207
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr20:17251877-17251640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 100
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr20:28818775-28819006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr20:35192925-35192702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
209, 47
               

               
Conread position:
               
245-478
               

               
Cow position:
               
chr20:35727770-35728001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
162, 140
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr20:3255197-3254973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr20:39415910-39415664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr20:4206125-4205884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr20:9014187-9014428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
229, 82
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr20:25009472-25009721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 121
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr20:32866036-32866271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr20:36741623-36741392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
209, 70
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr20:38551524-38551289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
210, 16
               

               
Conread position:
               
245-489
               

               
Cow position:
               
chr20:5644947-5644700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
245-489
               

               
Cow position:
               
chr20:11188647-11188884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
204, 68
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr20:15568789-15569037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 140
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr20:31927303-31927545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
230, 12
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr20:10208968-10208712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr20:7806409-7806653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
210, 144
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr20:15822705-15822457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:7363122-7362873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:7438689-7438948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:11481975-11482231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:23870659-23870908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 107
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:24712001-24711739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:30710477-30710742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:34097793-34098054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 234
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:34221637-34221384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:36010955-36010697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
213, 27
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:39518166-39517911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:39728611-39728352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr20:41089635-41089886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
245-507
               

               
Cow position:
               
chr20:36779568-36779836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 153
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr20:21786165-21786417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr20:22065226-22064963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
148, 100
               

               
Conread position:
               
245-511
               

               
Cow position:
               
chr20:23286176-23286432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
243, 20
               

               
Conread position:
               
245-511
               

               
Cow position:
               
chr20:34202795-34202538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 141
               

               
Conread position:
               
245-512
               

               
Cow position:
               
chr20:40177405-40177134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
212, 164
               

               
Conread position:
               
245-515
               

               
Cow position:
               
chr20:25657679-25657927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
245-524
               

               
Cow position:
               
chr20:20967481-20967203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 193
               

               
Conread position:
               
245-527
               

               
Cow position:
               
chr20:4332294-4332004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
245-529
               

               
Cow position:
               
chr20:20099441-20099725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
245-530
               

               
Cow position:
               
chr20:33532463-33532171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 141
               

               
Conread position:
               
245-535
               

               
Cow position:
               
chr20:14433263-14433570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr20:39398641-39398346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
212, 142
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr20:42197473-42197182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
245, 107
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr20:24069966-24069664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:381972-382274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 78
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:3141733-3141436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 16
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:3320984-3321285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:3599238-3599537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:4334369-4334667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:4945094-4945392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 68
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:5814726-5814423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 83
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:5827100-5826790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 107
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:6096335-6096638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 143
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:7426037-7426336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 134
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:9537292-9536987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 78
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:11550527-11550220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:12581795-12582094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:14980346-14980662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:15312829-15312512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:18392111-18392391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 87
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:19751467-19751162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 144
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:20242244-20241953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:20739127-20739436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 103
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:21372468-21372169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 197
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:22959188-22959489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 53
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:23064675-23064976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 80
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:23846504-23846819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 235
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:28067264-28067573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:28605369-28605058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 83
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:29805499-29805809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:29845210-29844908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:31746475-31746772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:32847505-32847206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
150, 176
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:32988672-32988979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:33144393-33144702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
209, 155
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:33435000-33435314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:35365202-35364904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:35906890-35907194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 146
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:36207974-36207655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 298
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:42309805-42310107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr20:42469919-42469617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 77
               

               
Conread position:
               
246-341
               

               
Cow position:
               
chr20:12334494-12334399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-350
               

               
Cow position:
               
chr20:35211102-35211205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
246-356
               

               
Cow position:
               
chr20:11499165-11499061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
246-356
               

               
Cow position:
               
chr20:31845126-31845236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-358
               

               
Cow position:
               
chr20:3781046-3781158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-383
               

               
Cow position:
               
chr20:7417008-7417145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-390
               

               
Cow position:
               
chr20:15589202-15589056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
246-394
               

               
Cow position:
               
chr20:23678556-23678706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
246-397
               

               
Cow position:
               
chr20:30744562-30744713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-402
               

               
Cow position:
               
chr20:14283079-14282924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
246-410
               

               
Cow position:
               
chr20:361031-361189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
246-417
               

               
Cow position:
               
chr20:11043315-11043489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
246-428
               

               
Cow position:
               
chr20:34083873-34083697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
246-429
               

               
Cow position:
               
chr20:12126145-12126328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-429
               

               
Cow position:
               
chr20:35208045-35208231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
246-455
               

               
Cow position:
               
chr20:28982860-28982649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
246-455
               

               
Cow position:
               
chr20:38090072-38089862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
246-456
               

               
Cow position:
               
chr20:6238478-6238688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
246-456
               

               
Cow position:
               
chr20:38847075-38847282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
246-471
               

               
Cow position:
               
chr20:6248442-6248665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
145, 192
               

               
Conread position:
               
246-473
               

               
Cow position:
               
chr20:40726436-40726661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
203, 76
               

               
Conread position:
               
246-476
               

               
Cow position:
               
chr20:5078786-5078549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
246-478
               

               
Cow position:
               
chr20:30888194-30887957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
71, 156
               

               
Conread position:
               
246-481
               

               
Cow position:
               
chr20:16941129-16941365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
246-485
               

               
Cow position:
               
chr20:28594446-28594200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
246-495
               

               
Cow position:
               
chr20:398148-398396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr20:5636640-5636388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 103
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr20:7738072-7738322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
209, 138
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr20:11741148-11741396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr20:14100276-14100532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 89
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr20:14540502-14540256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
155, 49
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr20:40450182-40449914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 158
               

               
Conread position:
               
246-502
               

               
Cow position:
               
chr20:16492232-16491971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
246-510
               

               
Cow position:
               
chr20:40303728-40303977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
202, 83
               

               
Conread position:
               
246-527
               

               
Cow position:
               
chr20:13652208-13652487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 143
               

               
Conread position:
               
246-527
               

               
Cow position:
               
chr20:34596939-34597233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
152, 19
               

               
Conread position:
               
246-537
               

               
Cow position:
               
chr20:14879948-14879643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
246-537
               

               
Cow position:
               
chr20:21019719-21019424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
246-539
               

               
Cow position:
               
chr20:20984151-20983861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 139
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr20:5998506-5998811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 233
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr20:6054350-6054660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 294
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr20:12995847-12996155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr20:39417744-39418041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
182, 91
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr20:40422943-40423237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
13, 152
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr20:40782120-40781822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 151
               

               
Conread position:
               
247-343
               

               
Cow position:
               
chr20:5078430-5078334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-351
               

               
Cow position:
               
chr20:4891961-4892065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-374
               

               
Cow position:
               
chr20:3564314-3564191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
247-386
               

               
Cow position:
               
chr20:25021586-25021447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
247-390
               

               
Cow position:
               
chr20:10245895-10246038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-391
               

               
Cow position:
               
chr20:8912341-8912485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr20:206493-206650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
247-425
               

               
Cow position:
               
chr20:25953422-25953247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
247-430
               

               
Cow position:
               
chr20:6372405-6372587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
151, 44
               

               
Conread position:
               
247-431
               

               
Cow position:
               
chr20:20124876-20125056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
247-452
               

               
Cow position:
               
chr20:24902135-24902345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
247-455
               

               
Cow position:
               
chr20:23850778-23850571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr20:39962733-39962525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
247-470
               

               
Cow position:
               
chr20:20898432-20898655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
145, 168
               

               
Conread position:
               
247-477
               

               
Cow position:
               
chr20:31799045-31799269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
213, 150
               

               
Conread position:
               
247-482
               

               
Cow position:
               
chr20:11548566-11548803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 81
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr20:18622732-18622497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr20:38872844-38873092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr20:13983514-13983271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
134, 151
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr20:28249338-28249091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
208, 114
               

               
Conread position:
               
247-495
               

               
Cow position:
               
chr20:42458698-42458943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 145
               

               
Conread position:
               
247-496
               

               
Cow position:
               
chr20:6240363-6240616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr20:6890866-6890620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
213, 24
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr20:11176095-11176339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
241, 24
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr20:14917443-14917204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
211, 139
               

               
Conread position:
               
247-534
               

               
Cow position:
               
chr20:580762-581062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 188
               

               
Conread position:
               
247-539
               

               
Cow position:
               
chr20:8556111-8556420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 129
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr20:1139610-1139920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr20:10200504-10200200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 155
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr20:13876553-13876855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr20:19237233-19236931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
205, 115
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr20:19328546-19328252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr20:34251514-34251825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
79, 176
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr20:41627183-41627493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
248-360
               

               
Cow position:
               
chr20:35442125-35442237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
248-396
               

               
Cow position:
               
chr20:42346011-42346154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
248-441
               

               
Cow position:
               
chr20:7709624-7709821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 127
               

               
Conread position:
               
248-490
               

               
Cow position:
               
chr20:23541003-23541244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
248-511
               

               
Cow position:
               
chr20:32463367-32463634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
142, 90
               

               
Conread position:
               
249-328
               

               
Cow position:
               
chr20:26790455-26790534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
80
               

               
Alignm identity:
               
72
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-343
               

               
Cow position:
               
chr20:19746127-19746033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-343
               

               
Cow position:
               
chr20:41274741-41274836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
249-347
               

               
Cow position:
               
chr20:38934899-38934997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-357
               

               
Cow position:
               
chr20:37273153-37273046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
249-358
               

               
Cow position:
               
chr20:26905831-26905722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-360
               

               
Cow position:
               
chr20:6053312-6053423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-372
               

               
Cow position:
               
chr20:21291816-21291693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-388
               

               
Cow position:
               
chr20:15766267-15766128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
249-392
               

               
Cow position:
               
chr20:24097157-24097014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-393
               

               
Cow position:
               
chr20:2742981-2743125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-393
               

               
Cow position:
               
chr20:17363503-17363643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
249-395
               

               
Cow position:
               
chr20:35591493-35591637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
249-398
               

               
Cow position:
               
chr20:4002250-4002103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
249-400
               

               
Cow position:
               
chr20:33820610-33820460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
249-408
               

               
Cow position:
               
chr20:41471256-41471097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-430
               

               
Cow position:
               
chr20:20934576-20934765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
249-441
               

               
Cow position:
               
chr20:34114143-34113947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr20:10772361-10772153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
249-471
               

               
Cow position:
               
chr20:11359476-11359693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 110
               

               
Conread position:
               
249-483
               

               
Cow position:
               
chr20:35146177-35145945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
249-486
               

               
Cow position:
               
chr20:5385587-5385826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
249-486
               

               
Cow position:
               
chr20:8262072-8261827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
249-486
               

               
Cow position:
               
chr20:10838056-10838300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
146, 110
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr20:2298634-2298873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
187, 34
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr20:6257899-6258156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
35, 181
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr20:10818084-10818319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
233, 146
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr20:18379534-18379286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr20:31081194-31080946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr20:35408007-35407767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
204, 88
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr20:40446485-40446235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr20:17670339-17670089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr20:20359626-20359876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 232
               

               
Conread position:
               
249-507
               

               
Cow position:
               
chr20:12205578-12205836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr20:6903470-6903208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
249-526
               

               
Cow position:
               
chr20:9923723-9923462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
239, 76
               

               
Conread position:
               
249-533
               

               
Cow position:
               
chr20:32583473-32583170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
144, 286
               

               
Conread position:
               
249-538
               

               
Cow position:
               
chr20:28296451-28296145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
249-539
               

               
Cow position:
               
chr20:18320638-18320941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:5950487-5950780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 127
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:6603197-6602894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 107
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:7441982-7442270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 15
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:8547222-8546926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:13752381-13752093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:14735831-14735529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:14807043-14806739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 228
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:21714924-21714606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:31323943-31323651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
141, 76
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:34108261-34107968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 122
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:34777336-34777039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 195
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:38768307-38768600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 83
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr20:38818155-38817863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
250-392
               

               
Cow position:
               
chr20:37919211-37919357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
250-412
               

               
Cow position:
               
chr20:32891050-32891212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
250-413
               

               
Cow position:
               
chr20:11392931-11392774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
250-477
               

               
Cow position:
               
chr20:33067205-33067439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
250-482
               

               
Cow position:
               
chr20:40692219-40691976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
250-496
               

               
Cow position:
               
chr20:36633967-36633722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 71
               

               
Conread position:
               
250-517
               

               
Cow position:
               
chr20:9433742-9433463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
250-535
               

               
Cow position:
               
chr20:9266952-9267243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
250-539
               

               
Cow position:
               
chr20:13023346-13023624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr20:2169568-2169855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 107
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr20:11038731-11038456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
240, 23
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr20:13829415-13829117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
251-339
               

               
Cow position:
               
chr20:37228930-37229018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-363
               

               
Cow position:
               
chr20:19834676-19834788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-390
               

               
Cow position:
               
chr20:8817337-8817476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-447
               

               
Cow position:
               
chr20:9376623-9376427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
251-474
               

               
Cow position:
               
chr20:16548124-16548350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
204, 146
               

               
Conread position:
               
251-497
               

               
Cow position:
               
chr20:4755679-4755918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
251-497
               

               
Cow position:
               
chr20:17470876-17470638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
203, 35
               

               
Conread position:
               
251-511
               

               
Cow position:
               
chr20:747096-746835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
209, 60
               

               
Conread position:
               
251-529
               

               
Cow position:
               
chr20:22485013-22484724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 100
               

               
Conread position:
               
251-529
               

               
Cow position:
               
chr20:28955546-28955835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 178
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr20:4621200-4621486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
252-349
               

               
Cow position:
               
chr20:30939082-30938985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-462
               

               
Cow position:
               
chr20:22000154-21999943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
252-533
               

               
Cow position:
               
chr20:39266805-39267095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 85
               

               
Conread position:
               
252-540
               

               
Cow position:
               
chr20:13025457-13025755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 197
               

               
Conread position:
               
252-540
               

               
Cow position:
               
chr20:38578611-38578904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 83
               

               
Conread position:
               
253-356
               

               
Cow position:
               
chr20:22923070-22922967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
253-376
               

               
Cow position:
               
chr20:21941586-21941463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
253-480
               

               
Cow position:
               
chr20:11611831-11611605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
204, 132
               

               
Conread position:
               
254-456
               

               
Cow position:
               
chr20:12085286-12085475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
254-472
               

               
Cow position:
               
chr20:36040626-36040403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
254-539
               

               
Cow position:
               
chr20:14759514-14759810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 139
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr20:20203370-20203069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 225
               

               
Conread position:
               
255-364
               

               
Cow position:
               
chr20:630674-630566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
255-369
               

               
Cow position:
               
chr20:21325476-21325362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-462
               

               
Cow position:
               
chr20:20056336-20056541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
255-476
               

               
Cow position:
               
chr20:38670900-38670684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
200, 138
               

               
Conread position:
               
255-486
               

               
Cow position:
               
chr20:19363213-19363447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
255-494
               

               
Cow position:
               
chr20:33976631-33976390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr20:16935165-16935395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
203, 63
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr20:25161975-25162224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 224
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr20:35710326-35710076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
31, 174
               

               
Conread position:
               
255-498
               

               
Cow position:
               
chr20:15073687-15073929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
255-511
               

               
Cow position:
               
chr20:17846110-17845850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 90
               

               
Conread position:
               
255-520
               

               
Cow position:
               
chr20:11542137-11542406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
255-533
               

               
Cow position:
               
chr20:8702761-8703048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr20:8578399-8578097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
146, 222
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr20:14572214-14572503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr20:22235462-22235168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr20:26996679-26996383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
202, 29
               

               
Conread position:
               
256-427
               

               
Cow position:
               
chr20:14620152-14620331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
256-428
               

               
Cow position:
               
chr20:29084234-29084412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
256-497
               

               
Cow position:
               
chr20:23792753-23792515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
202, 121
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr20:13269764-13269476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
197, 54
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr20:15548748-15549044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
141, 24
               

               
Conread position:
               
257-409
               

               
Cow position:
               
chr20:16405759-16405609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
257-481
               

               
Cow position:
               
chr20:33438832-33439058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 139
               

               
Conread position:
               
257-490
               

               
Cow position:
               
chr20:41883878-41883647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
198, 49
               

               
Conread position:
               
257-496
               

               
Cow position:
               
chr20:15235900-15235674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
198, 71
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr20:8308164-8307921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr20:24834237-24833998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
257-508
               

               
Cow position:
               
chr20:25351265-25351511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
257-526
               

               
Cow position:
               
chr20:8098434-8098153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
129, 149
               

               
Conread position:
               
257-539
               

               
Cow position:
               
chr20:21929053-21928758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 147
               

               
Conread position:
               
257-539
               

               
Cow position:
               
chr20:32083934-32084231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
136, 71
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr20:7211182-7210889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
200, 36
               

               
Conread position:
               
258-356
               

               
Cow position:
               
chr20:21535586-21535684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-396
               

               
Cow position:
               
chr20:38925706-38925842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
258-441
               

               
Cow position:
               
chr20:36239393-36239208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
258-443
               

               
Cow position:
               
chr20:6358767-6358577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
258-481
               

               
Cow position:
               
chr20:32709298-32709528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 197
               

               
Conread position:
               
258-495
               

               
Cow position:
               
chr20:10188421-10188181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
258-496
               

               
Cow position:
               
chr20:34786801-34787038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
258-539
               

               
Cow position:
               
chr20:40185527-40185822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
259-445
               

               
Cow position:
               
chr20:39212435-39212621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
156, 76
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr20:5009875-5009663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
198, 11
               

               
Conread position:
               
260-371
               

               
Cow position:
               
chr20:11866013-11866122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
260-498
               

               
Cow position:
               
chr20:28441472-28441233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
168, 143
               

               
Conread position:
               
261-360
               

               
Cow position:
               
chr20:15488850-15488751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-405
               

               
Cow position:
               
chr20:11101553-11101413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
261-455
               

               
Cow position:
               
chr20:7624101-7624296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
261-455
               

               
Cow position:
               
chr20:17100506-17100311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
261-486
               

               
Cow position:
               
chr20:6424112-6423888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
261-486
               

               
Cow position:
               
chr20:22265108-22265329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
196, 93
               

               
Conread position:
               
261-538
               

               
Cow position:
               
chr20:21761918-21761631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr20:23506326-23506520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 136
               

               
Conread position:
               
262-540
               

               
Cow position:
               
chr20:33363661-33363373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
126, 215
               

               
Conread position:
               
263-433
               

               
Cow position:
               
chr20:38850750-38850579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
263-468
               

               
Cow position:
               
chr20:30855619-30855816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
264-497
               

               
Cow position:
               
chr20:25686207-25686444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 97
               

               
Conread position:
               
267-368
               

               
Cow position:
               
chr20:32892940-32892839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
268-536
               

               
Cow position:
               
chr20:19266289-19266023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
269-413
               

               
Cow position:
               
chr20:1009570-1009714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-428
               

               
Cow position:
               
chr20:12534609-12534764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
269-511
               

               
Cow position:
               
chr20:34901704-34901459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
272-493
               

               
Cow position:
               
chr20:17765198-17765423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
274-426
               

               
Cow position:
               
chr20:32447406-32447265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 54
               

               
Conread position:
               
275-450
               

               
Cow position:
               
chr20:39613143-39613319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 77
               

               
Conread position:
               
275-497
               

               
Cow position:
               
chr20:5576905-5576672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
275-497
               

               
Cow position:
               
chr20:29404044-29404272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 203
               

               
Conread position:
               
275-512
               

               
Cow position:
               
chr20:24000666-24000912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr20:19339751-19340002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
276-481
               

               
Cow position:
               
chr20:40745585-40745360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
276-500
               

               
Cow position:
               
chr20:12430670-12430894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
276-540
               

               
Cow position:
               
chr20:34001261-34001543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 22
               

               
Conread position:
               
278-527
               

               
Cow position:
               
chr20:38124014-38123761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
177, 20
               

               
Conread position:
               
280-456
               

               
Cow position:
               
chr20:16818544-16818365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
280-481
               

               
Cow position:
               
chr20:32665264-32665056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr20:33819347-33819137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
280-492
               

               
Cow position:
               
chr20:15118401-15118185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
175, 103
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr20:3739879-3740095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
175, 120
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr20:13795102-13794894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr20:41028614-41028392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
280-497
               

               
Cow position:
               
chr20:37165835-37165630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
280-531
               

               
Cow position:
               
chr20:19616617-19616355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr20:271298-271570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
95, 143
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr20:35176652-35176917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
113, 140
               

               
Conread position:
               
281-434
               

               
Cow position:
               
chr20:16096965-16096812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
282-490
               

               
Cow position:
               
chr20:34085191-34084979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
282-538
               

               
Cow position:
               
chr20:16715515-16715255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
284-497
               

               
Cow position:
               
chr20:3606840-3607052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
286-401
               

               
Cow position:
               
chr20:23781015-23780900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
286-456
               

               
Cow position:
               
chr20:8429866-8429699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
286-534
               

               
Cow position:
               
chr20:32523583-32523324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
287-401
               

               
Cow position:
               
chr20:12782907-12783021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
287-450
               

               
Cow position:
               
chr20:1293912-1294075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr20:11340686-11340896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr20:39325509-39325294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
288-540
               

               
Cow position:
               
chr20:31740102-31740365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
102, 182
               

               
Conread position:
               
289-540
               

               
Cow position:
               
chr20:22313044-22313305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
104, 129
               

               
Conread position:
               
293-450
               

               
Cow position:
               
chr20:11514779-11514923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
297-477
               

               
Cow position:
               
chr20:39153352-39153170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
297-511
               

               
Cow position:
               
chr20:23982580-23982363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 182
               

               
Conread position:
               
297-513
               

               
Cow position:
               
chr20:23103331-23103106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr20:34918379-34918132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr20:35009629-35009888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
97, 236
               

               
Conread position:
               
298-527
               

               
Cow position:
               
chr20:3331178-3331419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
299-540
               

               
Cow position:
               
chr20:7659107-7659362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
55, 182
               

               
Conread position:
               
299-540
               

               
Cow position:
               
chr20:35958754-35958498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
91, 235
               

               
Conread position:
               
300-540
               

               
Cow position:
               
chr20:18500307-18500072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 5
               

               
Conread position:
               
301-493
               

               
Cow position:
               
chr20:23643034-23643226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 87
               

               
Conread position:
               
301-507
               

               
Cow position:
               
chr20:12065023-12064819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
302-497
               

               
Cow position:
               
chr20:19146981-19146778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
302-497
               

               
Cow position:
               
chr20:40257073-40256872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
153, 95
               

               
Conread position:
               
302-540
               

               
Cow position:
               
chr20:23505931-23505681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 173
               

               
Conread position:
               
303-540
               

               
Cow position:
               
chr20:5024849-5025090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
304-540
               

               
Cow position:
               
chr20:39019797-39019548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
87, 228
               

               
Conread position:
               
305-456
               

               
Cow position:
               
chr20:37339016-37338864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
305-477
               

               
Cow position:
               
chr20:16509595-16509421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr20:28804670-28804467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
308-486
               

               
Cow position:
               
chr20:11864034-11864217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
308-496
               

               
Cow position:
               
chr20:10884260-10884455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
309-497
               

               
Cow position:
               
chr20:21698490-21698291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
310-486
               

               
Cow position:
               
chr20:32830334-32830157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
313-472
               

               
Cow position:
               
chr20:30992234-30992071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
317-540
               

               
Cow position:
               
chr20:30817624-30817390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
318-538
               

               
Cow position:
               
chr20:7550325-7550096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 79
               

               
Conread position:
               
318-540
               

               
Cow position:
               
chr20:13967169-13967405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
318-540
               

               
Cow position:
               
chr20:39377079-39377292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
164, 67
               

               
Conread position:
               
319-497
               

               
Cow position:
               
chr20:34365110-34364936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
319-540
               

               
Cow position:
               
chr20:24727449-24727227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
320-496
               

               
Cow position:
               
chr20:282840-283020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
320-540
               

               
Cow position:
               
chr20:20202077-20201844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
321-540
               

               
Cow position:
               
chr20:9473530-9473761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr20:30778252-30778029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr20:22704377-22704196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 156
               

               
Conread position:
               
325-537
               

               
Cow position:
               
chr20:35130190-35129979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
330-517
               

               
Cow position:
               
chr20:7622989-7623183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
334-477
               

               
Cow position:
               
chr20:37357679-37357531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
334-540
               

               
Cow position:
               
chr20:17904230-17904013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
335-476
               

               
Cow position:
               
chr20:41403647-41403502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
335-523
               

               
Cow position:
               
chr20:27003654-27003860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
335-540
               

               
Cow position:
               
chr20:5104380-5104582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
336-538
               

               
Cow position:
               
chr20:11923177-11923384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
337-540
               

               
Cow position:
               
chr20:15760881-15761095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 59
               

               
Conread position:
               
337-540
               

               
Cow position:
               
chr20:18185635-18185432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
339-497
               

               
Cow position:
               
chr20:28832037-28831872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
340-527
               

               
Cow position:
               
chr20:30938705-30938508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
340-540
               

               
Cow position:
               
chr20:24521814-24521604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
346-458
               

               
Cow position:
               
chr20:396576-396460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
346-497
               

               
Cow position:
               
chr20:24002375-24002220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
346-533
               

               
Cow position:
               
chr20:31261783-31261590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
54, 179
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr20:9379465-9379262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr20:37272774-37272565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
347-497
               

               
Cow position:
               
chr20:31077611-31077456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
348-540
               

               
Cow position:
               
chr20:20312690-20312884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 48
               

               
Conread position:
               
349-477
               

               
Cow position:
               
chr20:23936348-23936483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr20:24392034-24391833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr20:26469009-26469212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
355-486
               

               
Cow position:
               
chr20:6848681-6848543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
356-497
               

               
Cow position:
               
chr20:3781374-3781522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
356-497
               

               
Cow position:
               
chr20:27340112-27339969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 118
               

               
Conread position:
               
356-540
               

               
Cow position:
               
chr20:9988629-9988440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
356-540
               

               
Cow position:
               
chr20:27314719-27314533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
364-478
               

               
Cow position:
               
chr20:11498552-11498435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
364-496
               

               
Cow position:
               
chr20:9701527-9701672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
389-540
               

               
Cow position:
               
chr20:12334391-12334235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 9
               
Show alignments to all cow chromosomes.