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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010H17.5
        

               
Conread position:
               
218-486
               

               
Cow position:
               
chr24:17284867-17285145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
218-486
               

               
Cow position:
               
chr24:27630515-27630252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
222-539
               

               
Cow position:
               
chr24:6150139-6149816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
225-399
               

               
Cow position:
               
chr24:28689780-28689606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
113, 6
               

               
Conread position:
               
229-350
               

               
Cow position:
               
chr24:42815641-42815517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
229-482
               

               
Cow position:
               
chr24:13626392-13626143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
230-336
               

               
Cow position:
               
chr24:38114745-38114851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-434
               

               
Cow position:
               
chr24:28043081-28042876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
163, 15
               

               
Conread position:
               
230-434
               

               
Cow position:
               
chr24:39910926-39911133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
230-540
               

               
Cow position:
               
chr24:27149491-27149183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
167, 104
               

               
Conread position:
               
230-540
               

               
Cow position:
               
chr24:43200168-43200487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
234-497
               

               
Cow position:
               
chr24:44987272-44987546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
236-468
               

               
Cow position:
               
chr24:27418002-27418232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
163, 67
               

               
Conread position:
               
237-486
               

               
Cow position:
               
chr24:36404045-36404295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
154, 5
               

               
Conread position:
               
238-381
               

               
Cow position:
               
chr24:22194516-22194371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
238-434
               

               
Cow position:
               
chr24:42876792-42876982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
238-486
               

               
Cow position:
               
chr24:2970509-2970757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
163, 63
               

               
Conread position:
               
239-483
               

               
Cow position:
               
chr24:10125983-10125723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
241-428
               

               
Cow position:
               
chr24:20734124-20733930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
241-486
               

               
Cow position:
               
chr24:22225283-22225030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
241-540
               

               
Cow position:
               
chr24:32369818-32370124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 160
               

               
Conread position:
               
241-540
               

               
Cow position:
               
chr24:34410740-34410443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
242-351
               

               
Cow position:
               
chr24:44776081-44776190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-474
               

               
Cow position:
               
chr24:36711290-36711061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
217, 133
               

               
Conread position:
               
242-534
               

               
Cow position:
               
chr24:352511-352813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 69
               

               
Conread position:
               
242-540
               

               
Cow position:
               
chr24:16994977-16994679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
243-456
               

               
Cow position:
               
chr24:34272907-34272694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
244-371
               

               
Cow position:
               
chr24:253546-253667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
244-406
               

               
Cow position:
               
chr24:11007550-11007389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
244-425
               

               
Cow position:
               
chr24:2992788-2992965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
244-497
               

               
Cow position:
               
chr24:6140857-6141123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr24:19769589-19769284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 210
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr24:33465528-33465815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 21
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr24:41980567-41980879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
150, 84
               

               
Conread position:
               
245-321
               

               
Cow position:
               
chr24:27719434-27719510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
77
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-339
               

               
Cow position:
               
chr24:33311263-33311357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-339
               

               
Cow position:
               
chr24:43024353-43024259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-340
               

               
Cow position:
               
chr24:22420053-22419958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-343
               

               
Cow position:
               
chr24:27782308-27782210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-343
               

               
Cow position:
               
chr24:37252251-37252152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
245-347
               

               
Cow position:
               
chr24:25970984-25971083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
245-348
               

               
Cow position:
               
chr24:256119-256016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-351
               

               
Cow position:
               
chr24:29014059-29013953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-351
               

               
Cow position:
               
chr24:39960906-39961011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
245-352
               

               
Cow position:
               
chr24:35250019-35250126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-353
               

               
Cow position:
               
chr24:35029968-35030076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-353
               

               
Cow position:
               
chr24:43499753-43499643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
245-354
               

               
Cow position:
               
chr24:7113315-7113206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-357
               

               
Cow position:
               
chr24:28024372-28024260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-359
               

               
Cow position:
               
chr24:6887101-6886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
245-359
               

               
Cow position:
               
chr24:21251942-21252056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
245-359
               

               
Cow position:
               
chr24:22235560-22235446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-360
               

               
Cow position:
               
chr24:30202916-30202802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
245-362
               

               
Cow position:
               
chr24:27810250-27810134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
245-364
               

               
Cow position:
               
chr24:27553187-27553068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 48
               

               
Conread position:
               
245-368
               

               
Cow position:
               
chr24:5152616-5152493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-368
               

               
Cow position:
               
chr24:18333043-18333159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
245-369
               

               
Cow position:
               
chr24:41566009-41566126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
245-370
               

               
Cow position:
               
chr24:42380646-42380765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
245-371
               

               
Cow position:
               
chr24:26848641-26848764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
245-372
               

               
Cow position:
               
chr24:22567196-22567069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
245-372
               

               
Cow position:
               
chr24:35310816-35310687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr24:2588680-2588809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 102
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr24:13888795-13888668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr24:17309045-17309173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr24:33244487-33244360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr24:42226365-42226237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
245-375
               

               
Cow position:
               
chr24:32890951-32891081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-379
               

               
Cow position:
               
chr24:41412204-41412335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
245-381
               

               
Cow position:
               
chr24:2730523-2730655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
245-381
               

               
Cow position:
               
chr24:13610403-13610268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr24:20969572-20969714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr24:22133264-22133118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
245-389
               

               
Cow position:
               
chr24:28470587-28470731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-390
               

               
Cow position:
               
chr24:18750800-18750652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
245-390
               

               
Cow position:
               
chr24:42981669-42981811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chr24:37651818-37651671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-394
               

               
Cow position:
               
chr24:6742314-6742165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
245-394
               

               
Cow position:
               
chr24:21834867-21835016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
245-395
               

               
Cow position:
               
chr24:25122431-25122287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
245-396
               

               
Cow position:
               
chr24:7390244-7390392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
141, 80
               

               
Conread position:
               
245-397
               

               
Cow position:
               
chr24:40404719-40404867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
245-402
               

               
Cow position:
               
chr24:15288920-15288763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
245-403
               

               
Cow position:
               
chr24:5360809-5360657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
245-404
               

               
Cow position:
               
chr24:28510886-28510734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
245-405
               

               
Cow position:
               
chr24:8676916-8676755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
245-415
               

               
Cow position:
               
chr24:27202181-27202013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
245-419
               

               
Cow position:
               
chr24:14551554-14551387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
245-419
               

               
Cow position:
               
chr24:18810924-18810762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 84
               

               
Conread position:
               
245-419
               

               
Cow position:
               
chr24:28344483-28344301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
245-425
               

               
Cow position:
               
chr24:23000107-22999924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
245-425
               

               
Cow position:
               
chr24:29984892-29985071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr24:11028597-11028774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr24:38811378-38811560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr24:40389702-40389518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
245-428
               

               
Cow position:
               
chr24:23575069-23575247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
245-431
               

               
Cow position:
               
chr24:20364317-20364503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 173
               

               
Conread position:
               
245-431
               

               
Cow position:
               
chr24:31816671-31816483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
245-432
               

               
Cow position:
               
chr24:13948214-13948027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
245-433
               

               
Cow position:
               
chr24:19637682-19637489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
245-434
               

               
Cow position:
               
chr24:37823618-37823432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
245-441
               

               
Cow position:
               
chr24:18615093-18614896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 37
               

               
Conread position:
               
245-441
               

               
Cow position:
               
chr24:28342451-28342247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr24:230378-230172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
245-447
               

               
Cow position:
               
chr24:3656273-3656475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
143, 184
               

               
Conread position:
               
245-447
               

               
Cow position:
               
chr24:42862715-42862515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
245-451
               

               
Cow position:
               
chr24:32095402-32095207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
245-451
               

               
Cow position:
               
chr24:39791633-39791426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
245-452
               

               
Cow position:
               
chr24:41405987-41405783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 151
               

               
Conread position:
               
245-454
               

               
Cow position:
               
chr24:16895046-16895247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 20
               

               
Conread position:
               
245-454
               

               
Cow position:
               
chr24:29561480-29561690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 194
               

               
Conread position:
               
245-454
               

               
Cow position:
               
chr24:37974888-37975097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
147, 180
               

               
Conread position:
               
245-455
               

               
Cow position:
               
chr24:2402277-2402485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr24:22647249-22647455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr24:26880845-26880648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr24:35632072-35631869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr24:39523356-39523565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
245-461
               

               
Cow position:
               
chr24:14457631-14457845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
245-461
               

               
Cow position:
               
chr24:34496217-34495998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 203
               

               
Conread position:
               
245-471
               

               
Cow position:
               
chr24:27713312-27713541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr24:27040140-27039910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr24:34390369-34390156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
245-475
               

               
Cow position:
               
chr24:41068353-41068132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
245-476
               

               
Cow position:
               
chr24:8006399-8006169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
245-477
               

               
Cow position:
               
chr24:19465825-19466064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
245-478
               

               
Cow position:
               
chr24:390196-389957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
163, 92
               

               
Conread position:
               
245-478
               

               
Cow position:
               
chr24:28289161-28289393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
209, 16
               

               
Conread position:
               
245-481
               

               
Cow position:
               
chr24:26554504-26554747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
147, 184
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr24:12200316-12200560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr24:43683370-43683614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
245-485
               

               
Cow position:
               
chr24:11119370-11119135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
208, 133
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr24:16089320-16089085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr24:21519520-21519286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
245-486
               

               
Cow position:
               
chr24:34008480-34008729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
245-490
               

               
Cow position:
               
chr24:18313840-18314103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
87, 135
               

               
Conread position:
               
245-490
               

               
Cow position:
               
chr24:21606586-21606815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr24:31359414-31359165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr24:32739181-32739432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
141, 29
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr24:18390208-18390451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
245-496
               

               
Cow position:
               
chr24:30313933-30314194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:6912271-6912514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
142, 182
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:16268036-16268276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:17955352-17955606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 81
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:18356959-18357216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 180
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:24490925-24491173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:27906531-27906275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:28063040-28062789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:28721977-28721728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 49
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:29587091-29586830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:35576447-35576698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 40
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr24:41423696-41423446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
245-498
               

               
Cow position:
               
chr24:5754928-5754674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
245-507
               

               
Cow position:
               
chr24:19187030-19186787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
243, 90
               

               
Conread position:
               
245-517
               

               
Cow position:
               
chr24:6450583-6450313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
245-518
               

               
Cow position:
               
chr24:18331813-18331535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
245-523
               

               
Cow position:
               
chr24:10300169-10299891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
143, 99
               

               
Conread position:
               
245-529
               

               
Cow position:
               
chr24:17832728-17833012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
208, 90
               

               
Conread position:
               
245-530
               

               
Cow position:
               
chr24:5683372-5683085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
245-530
               

               
Cow position:
               
chr24:25885066-25885360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
245-535
               

               
Cow position:
               
chr24:28553473-28553751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 14
               

               
Conread position:
               
245-537
               

               
Cow position:
               
chr24:28253812-28253495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 183
               

               
Conread position:
               
245-537
               

               
Cow position:
               
chr24:34742846-34742543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 195
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr24:16645226-16645534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr24:17104477-17104779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 233
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:1269877-1269590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:6102920-6102608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
139, 78
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:10499307-10498996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:11887250-11886943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
150, 82
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:14648266-14648549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
215, 131
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:15246550-15246849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 177
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:15861501-15861815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 293
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:16510070-16509758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 159
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:17294105-17294401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:17311130-17311423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:18741479-18741785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 144
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:19535163-19535462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 152
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:20874774-20874462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:27608015-27608312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:27824555-27824250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
149, 203
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:28496488-28496801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:28700144-28699843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:29063566-29063860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 75
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:30235962-30235655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:30483848-30484158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:31159708-31159415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 88
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:33098380-33098702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:33153870-33153568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:33944494-33944193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 129
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:37650760-37650456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:40130222-40129908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:42103453-42103159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr24:42825412-42825712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
212, 88
               

               
Conread position:
               
246-360
               

               
Cow position:
               
chr24:18968940-18968826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-360
               

               
Cow position:
               
chr24:29677823-29677938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
246-364
               

               
Cow position:
               
chr24:39218460-39218579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
246-370
               

               
Cow position:
               
chr24:17689520-17689643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
246-371
               

               
Cow position:
               
chr24:7757864-7757739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-382
               

               
Cow position:
               
chr24:27448737-27448600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
246-382
               

               
Cow position:
               
chr24:34465414-34465550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-417
               

               
Cow position:
               
chr24:18474637-18474808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
145, 159
               

               
Conread position:
               
246-419
               

               
Cow position:
               
chr24:13586900-13587069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
246-425
               

               
Cow position:
               
chr24:19623947-19623771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
246-437
               

               
Cow position:
               
chr24:27284908-27284721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
246-452
               

               
Cow position:
               
chr24:43832622-43832409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
246-455
               

               
Cow position:
               
chr24:32194600-32194391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
246-456
               

               
Cow position:
               
chr24:20225828-20225628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
246-459
               

               
Cow position:
               
chr24:20807626-20807412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
192, 61
               

               
Conread position:
               
246-473
               

               
Cow position:
               
chr24:38478301-38478521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
246-476
               

               
Cow position:
               
chr24:24662039-24662271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 151
               

               
Conread position:
               
246-486
               

               
Cow position:
               
chr24:7777537-7777767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
180, 80
               

               
Conread position:
               
246-486
               

               
Cow position:
               
chr24:37395122-37395359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
246-492
               

               
Cow position:
               
chr24:5632939-5633191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
246-495
               

               
Cow position:
               
chr24:43028238-43028483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr24:23186827-23187080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
144, 228
               

               
Conread position:
               
246-497
               

               
Cow position:
               
chr24:23694809-23695056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
51, 134
               

               
Conread position:
               
246-498
               

               
Cow position:
               
chr24:18975301-18975036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
246-511
               

               
Cow position:
               
chr24:18970416-18970685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 152
               

               
Conread position:
               
246-515
               

               
Cow position:
               
chr24:32071053-32070782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 88
               

               
Conread position:
               
246-526
               

               
Cow position:
               
chr24:14171602-14171889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
246-530
               

               
Cow position:
               
chr24:35150610-35150330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 88
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr24:3165910-3165607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 220
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr24:5142034-5141726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
147, 120
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr24:18484905-18485214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 25
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr24:27290963-27290661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 184
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr24:30229569-30229254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 204
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr24:44040916-44041223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
247-357
               

               
Cow position:
               
chr24:162094-161984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-357
               

               
Cow position:
               
chr24:21623313-21623204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
247-357
               

               
Cow position:
               
chr24:40957159-40957046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
247-370
               

               
Cow position:
               
chr24:29539838-29539961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
247-374
               

               
Cow position:
               
chr24:15263967-15263839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
247-392
               

               
Cow position:
               
chr24:41916350-41916199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
247-395
               

               
Cow position:
               
chr24:34896610-34896755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
247-430
               

               
Cow position:
               
chr24:33372642-33372466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr24:2359091-2359294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
247-461
               

               
Cow position:
               
chr24:880712-880506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
247-461
               

               
Cow position:
               
chr24:31309484-31309272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr24:14550885-14550657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
149, 88
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr24:27220000-27220242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 24
               

               
Conread position:
               
247-490
               

               
Cow position:
               
chr24:10671486-10671237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
247-496
               

               
Cow position:
               
chr24:22079551-22079298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr24:18017318-18017064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
202, 150
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr24:19800933-19800683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
158, 60
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr24:33230765-33230514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
247-516
               

               
Cow position:
               
chr24:31812280-31812007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
145, 178
               

               
Conread position:
               
247-516
               

               
Cow position:
               
chr24:32204704-32204977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 119
               

               
Conread position:
               
247-538
               

               
Cow position:
               
chr24:27725921-27726216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 232
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr24:43371335-43371034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
207, 142
               

               
Conread position:
               
248-357
               

               
Cow position:
               
chr24:31383205-31383101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
248-374
               

               
Cow position:
               
chr24:36303226-36303353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
248-479
               

               
Cow position:
               
chr24:28234132-28233904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
146, 79
               

               
Conread position:
               
248-486
               

               
Cow position:
               
chr24:26928854-26929096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
248-497
               

               
Cow position:
               
chr24:16895348-16895599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
248-497
               

               
Cow position:
               
chr24:32822678-32822942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 239
               

               
Conread position:
               
248-528
               

               
Cow position:
               
chr24:32124553-32124837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
248-538
               

               
Cow position:
               
chr24:20801256-20801556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
207, 141
               

               
Conread position:
               
248-540
               

               
Cow position:
               
chr24:15373495-15373195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 141
               

               
Conread position:
               
248-540
               

               
Cow position:
               
chr24:25194354-25194052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
175, 63
               

               
Conread position:
               
249-355
               

               
Cow position:
               
chr24:18328386-18328489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
249-369
               

               
Cow position:
               
chr24:24227588-24227711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
249-369
               

               
Cow position:
               
chr24:36286658-36286538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-371
               

               
Cow position:
               
chr24:32230417-32230541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
249-384
               

               
Cow position:
               
chr24:36775690-36775821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
249-391
               

               
Cow position:
               
chr24:17375727-17375585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-391
               

               
Cow position:
               
chr24:28355605-28355739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
249-394
               

               
Cow position:
               
chr24:42984479-42984335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
249-427
               

               
Cow position:
               
chr24:6151877-6151705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
249-429
               

               
Cow position:
               
chr24:27349088-27349271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
142, 79
               

               
Conread position:
               
249-432
               

               
Cow position:
               
chr24:16259150-16259333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
249-433
               

               
Cow position:
               
chr24:4710155-4710341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 65
               

               
Conread position:
               
249-434
               

               
Cow position:
               
chr24:12452872-12452686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
143, 48
               

               
Conread position:
               
249-441
               

               
Cow position:
               
chr24:27900816-27900625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
249-453
               

               
Cow position:
               
chr24:1438181-1438388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 153
               

               
Conread position:
               
249-475
               

               
Cow position:
               
chr24:38006629-38006846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
199, 69
               

               
Conread position:
               
249-486
               

               
Cow position:
               
chr24:28319120-28319351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
132, 153
               

               
Conread position:
               
249-490
               

               
Cow position:
               
chr24:39159463-39159702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
200, 9
               

               
Conread position:
               
249-495
               

               
Cow position:
               
chr24:25112286-25112046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
203, 96
               

               
Conread position:
               
249-495
               

               
Cow position:
               
chr24:25678112-25677876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
206, 68
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr24:19612095-19611846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr24:24061715-24061965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr24:35827826-35827578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
249-497
               

               
Cow position:
               
chr24:37037991-37037736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 232
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr24:34368918-34369168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
249-511
               

               
Cow position:
               
chr24:11201559-11201823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
249-528
               

               
Cow position:
               
chr24:15347678-15347397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
249-533
               

               
Cow position:
               
chr24:28990648-28990358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
249-539
               

               
Cow position:
               
chr24:27267703-27267422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
206, 47
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:814181-814479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:3493973-3493678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 148
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:5651910-5652191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:15057484-15057188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
204, 69
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:24250811-24250518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:27874672-27874390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
207, 49
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:29389323-29389032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr24:34396090-34396388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
208, 125
               

               
Conread position:
               
250-347
               

               
Cow position:
               
chr24:13058110-13058014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
250-351
               

               
Cow position:
               
chr24:32818215-32818313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
250-366
               

               
Cow position:
               
chr24:37453417-37453532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
250-369
               

               
Cow position:
               
chr24:14786467-14786348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-378
               

               
Cow position:
               
chr24:18668665-18668538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
250-422
               

               
Cow position:
               
chr24:16118448-16118281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
250-482
               

               
Cow position:
               
chr24:40592805-40592567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
250-485
               

               
Cow position:
               
chr24:6131785-6132023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
250-486
               

               
Cow position:
               
chr24:38841334-38841555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
250-497
               

               
Cow position:
               
chr24:30860723-30860473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
250-498
               

               
Cow position:
               
chr24:27054501-27054243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 154
               

               
Conread position:
               
250-501
               

               
Cow position:
               
chr24:4725056-4724810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
205, 108
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr24:24457163-24457461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 15
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr24:29673609-29673305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr24:31324372-31324065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
251-384
               

               
Cow position:
               
chr24:42726537-42726404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-434
               

               
Cow position:
               
chr24:28600345-28600535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
251-468
               

               
Cow position:
               
chr24:29605946-29606177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
251-476
               

               
Cow position:
               
chr24:29171048-29170828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
202, 59
               

               
Conread position:
               
251-511
               

               
Cow position:
               
chr24:26732536-26732272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 53
               

               
Conread position:
               
251-538
               

               
Cow position:
               
chr24:27844441-27844732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 174
               

               
Conread position:
               
251-539
               

               
Cow position:
               
chr24:12851793-12851517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr24:17860171-17860465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 196
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr24:28326994-28327297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 83
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr24:39849803-39850093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
139, 5
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr24:43364445-43364149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 68
               

               
Conread position:
               
251-540
               

               
Cow position:
               
chr24:44054081-44054356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 82
               

               
Conread position:
               
252-427
               

               
Cow position:
               
chr24:175409-175586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
252-540
               

               
Cow position:
               
chr24:29679227-29679525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 75
               

               
Conread position:
               
253-357
               

               
Cow position:
               
chr24:39806867-39806762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
254-486
               

               
Cow position:
               
chr24:17752029-17752264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
254-495
               

               
Cow position:
               
chr24:39227078-39226841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
199, 73
               

               
Conread position:
               
254-497
               

               
Cow position:
               
chr24:18374852-18374615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
200, 139
               

               
Conread position:
               
254-497
               

               
Cow position:
               
chr24:33723761-33724008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
254-498
               

               
Cow position:
               
chr24:19736251-19736491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr24:24755529-24755235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
255-369
               

               
Cow position:
               
chr24:12656966-12657080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-379
               

               
Cow position:
               
chr24:42687928-42687807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
255-393
               

               
Cow position:
               
chr24:34556117-34555981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
255-430
               

               
Cow position:
               
chr24:116476-116647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
255-433
               

               
Cow position:
               
chr24:25165117-25164938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
132, 145
               

               
Conread position:
               
255-441
               

               
Cow position:
               
chr24:30308475-30308660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
255-456
               

               
Cow position:
               
chr24:41755945-41755745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
151, 86
               

               
Conread position:
               
255-462
               

               
Cow position:
               
chr24:13353122-13352916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
135, 190
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr24:39905364-39905592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
255-496
               

               
Cow position:
               
chr24:40301240-40300997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr24:29595728-29595974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr24:43927250-43927485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
233, 68
               

               
Conread position:
               
255-530
               

               
Cow position:
               
chr24:43432871-43432594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 19
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr24:32054743-32054458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
255-540
               

               
Cow position:
               
chr24:33221849-33222154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
47, 231
               

               
Conread position:
               
256-391
               

               
Cow position:
               
chr24:23667040-23667171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
256-433
               

               
Cow position:
               
chr24:7046668-7046843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chr24:10031667-10031480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
257-376
               

               
Cow position:
               
chr24:6159337-6159452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
257-391
               

               
Cow position:
               
chr24:6723849-6723714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
257-391
               

               
Cow position:
               
chr24:27740276-27740142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-416
               

               
Cow position:
               
chr24:18442478-18442639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
257-476
               

               
Cow position:
               
chr24:43967423-43967643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr24:23556253-23556490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr24:30897457-30897701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
257-497
               

               
Cow position:
               
chr24:34533202-34532964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 85
               

               
Conread position:
               
257-501
               

               
Cow position:
               
chr24:26455922-26455672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr24:28690765-28690501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
257-535
               

               
Cow position:
               
chr24:2095801-2096098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 281
               

               
Conread position:
               
257-537
               

               
Cow position:
               
chr24:23824341-23824625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 87
               

               
Conread position:
               
257-539
               

               
Cow position:
               
chr24:20943242-20942954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr24:212068-211767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 221
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr24:16556563-16556847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr24:27748721-27748435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
200, 121
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr24:29782242-29781947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr24:35675627-35675329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 139
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr24:40850232-40849944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
198, 39
               

               
Conread position:
               
258-379
               

               
Cow position:
               
chr24:40983210-40983090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
258-392
               

               
Cow position:
               
chr24:26001467-26001333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-392
               

               
Cow position:
               
chr24:44512370-44512240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
258-474
               

               
Cow position:
               
chr24:10242704-10242921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
258-507
               

               
Cow position:
               
chr24:36173703-36173955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
258-516
               

               
Cow position:
               
chr24:201557-201816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr24:3430813-3430521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 79
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr24:8886990-8886702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr24:27052418-27052709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
259-393
               

               
Cow position:
               
chr24:29538427-29538566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
259-516
               

               
Cow position:
               
chr24:39483555-39483292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
259-540
               

               
Cow position:
               
chr24:19261299-19261566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
229, 44
               

               
Conread position:
               
261-364
               

               
Cow position:
               
chr24:22315533-22315430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-401
               

               
Cow position:
               
chr24:18732025-18732165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-434
               

               
Cow position:
               
chr24:28045836-28045655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr24:23616773-23616480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
262-477
               

               
Cow position:
               
chr24:17434686-17434475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
193, 72
               

               
Conread position:
               
262-498
               

               
Cow position:
               
chr24:11005749-11005502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
263-497
               

               
Cow position:
               
chr24:31258265-31258501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
263-540
               

               
Cow position:
               
chr24:11840262-11839964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 134
               

               
Conread position:
               
264-497
               

               
Cow position:
               
chr24:18243393-18243632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 135
               

               
Conread position:
               
264-540
               

               
Cow position:
               
chr24:6507697-6507978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
265-387
               

               
Cow position:
               
chr24:15480295-15480414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
266-496
               

               
Cow position:
               
chr24:43506440-43506651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
222, 32
               

               
Conread position:
               
267-441
               

               
Cow position:
               
chr24:21895120-21894945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
267-496
               

               
Cow position:
               
chr24:43635497-43635276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 56
               

               
Conread position:
               
268-474
               

               
Cow position:
               
chr24:37945560-37945771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
268-498
               

               
Cow position:
               
chr24:18355278-18355059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
186, 102
               

               
Conread position:
               
268-540
               

               
Cow position:
               
chr24:35074159-35073878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
269-394
               

               
Cow position:
               
chr24:31578295-31578164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
269-424
               

               
Cow position:
               
chr24:3160900-3160749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
269-456
               

               
Cow position:
               
chr24:19125-19322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
269-540
               

               
Cow position:
               
chr24:15508476-15508750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 5
               

               
Conread position:
               
274-485
               

               
Cow position:
               
chr24:9070383-9070586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
275-418
               

               
Cow position:
               
chr24:44145641-44145499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
275-526
               

               
Cow position:
               
chr24:35569240-35568992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
180, 30
               

               
Conread position:
               
275-540
               

               
Cow position:
               
chr24:30544803-30545070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
279-457
               

               
Cow position:
               
chr24:35467154-35467324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
279-466
               

               
Cow position:
               
chr24:6957555-6957379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
280-421
               

               
Cow position:
               
chr24:2693864-2694006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
280-434
               

               
Cow position:
               
chr24:22511615-22511460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
280-437
               

               
Cow position:
               
chr24:38612942-38612788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
280-456
               

               
Cow position:
               
chr24:20594604-20594420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
280-456
               

               
Cow position:
               
chr24:23863571-23863752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 100
               

               
Conread position:
               
280-476
               

               
Cow position:
               
chr24:35332783-35332579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr24:9036244-9036034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
194, 117
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr24:27096747-27096521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
280-496
               

               
Cow position:
               
chr24:42344939-42345167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr24:17407447-17407175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr24:38815025-38814757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
108, 163
               

               
Conread position:
               
282-477
               

               
Cow position:
               
chr24:40837828-40837635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
173, 77
               

               
Conread position:
               
282-497
               

               
Cow position:
               
chr24:18786865-18787083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
282-497
               

               
Cow position:
               
chr24:19000104-18999884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
285-477
               

               
Cow position:
               
chr24:41986048-41985847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
285-540
               

               
Cow position:
               
chr24:3152525-3152791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
287-451
               

               
Cow position:
               
chr24:25263688-25263852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
287-482
               

               
Cow position:
               
chr24:36008537-36008338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
87, 118
               

               
Conread position:
               
287-492
               

               
Cow position:
               
chr24:20249845-20250058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr24:19179387-19179609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr24:28599809-28600026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
289-441
               

               
Cow position:
               
chr24:40824131-40823987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
293-389
               

               
Cow position:
               
chr24:27511868-27511771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
294-434
               

               
Cow position:
               
chr24:33598226-33598366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-442
               

               
Cow position:
               
chr24:26787889-26787747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
297-456
               

               
Cow position:
               
chr24:37267703-37267543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
297-477
               

               
Cow position:
               
chr24:39290086-39289912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
297-496
               

               
Cow position:
               
chr24:27340978-27341182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
297-510
               

               
Cow position:
               
chr24:39143653-39143429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr24:34565160-34564912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
298-497
               

               
Cow position:
               
chr24:7914046-7913839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
298-539
               

               
Cow position:
               
chr24:23442541-23442796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 157
               

               
Conread position:
               
299-539
               

               
Cow position:
               
chr24:5666-5911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
301-511
               

               
Cow position:
               
chr24:20024650-20024431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 96
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr24:6487950-6487760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
304-540
               

               
Cow position:
               
chr24:10012786-10012558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
183, 93
               

               
Conread position:
               
305-427
               

               
Cow position:
               
chr24:25752150-25752280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr24:39833482-39833675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
155, 83
               

               
Conread position:
               
313-540
               

               
Cow position:
               
chr24:10841182-10841430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 234
               

               
Conread position:
               
314-447
               

               
Cow position:
               
chr24:21638166-21638029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 88
               

               
Conread position:
               
315-540
               

               
Cow position:
               
chr24:21918205-21918432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
319-497
               

               
Cow position:
               
chr24:7917342-7917528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
325-490
               

               
Cow position:
               
chr24:19634085-19633919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 7
               

               
Conread position:
               
328-540
               

               
Cow position:
               
chr24:15473368-15473141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 59
               

               
Conread position:
               
335-482
               

               
Cow position:
               
chr24:6160086-6160236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
335-540
               

               
Cow position:
               
chr24:35794732-35794954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
336-486
               

               
Cow position:
               
chr24:34782786-34782937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
337-540
               

               
Cow position:
               
chr24:39218839-39219061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
338-519
               

               
Cow position:
               
chr24:25525041-25524864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
339-539
               

               
Cow position:
               
chr24:34315355-34315144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
339-540
               

               
Cow position:
               
chr24:18405312-18405522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 192
               

               
Conread position:
               
340-494
               

               
Cow position:
               
chr24:27552892-27552735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
340-540
               

               
Cow position:
               
chr24:42007738-42007531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
116, 163
               

               
Conread position:
               
342-540
               

               
Cow position:
               
chr24:36554837-36555044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
344-517
               

               
Cow position:
               
chr24:885694-885875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
345-497
               

               
Cow position:
               
chr24:27202593-27202434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
345-540
               

               
Cow position:
               
chr24:27968077-27967866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr24:18695611-18695407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr24:27719768-27719969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
347-486
               

               
Cow position:
               
chr24:17567376-17567233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
349-539
               

               
Cow position:
               
chr24:24136872-24137066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr24:31382890-31382694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
350-495
               

               
Cow position:
               
chr24:30226928-30226779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
354-540
               

               
Cow position:
               
chr24:5152220-5152019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
358-540
               

               
Cow position:
               
chr24:27207215-27207409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 45
               

               
Conread position:
               
359-539
               

               
Cow position:
               
chr24:21860243-21860434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 171
               
Show alignments to all cow chromosomes.