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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010J08.3
        

               
Conread position:
               
797-1030
               

               
Cow position:
               
chr12:9465809-9465565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
797-1159
               

               
Cow position:
               
chr12:941291-941657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
801-1084
               

               
Cow position:
               
chr12:35807334-35807622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
803-1075
               

               
Cow position:
               
chr12:16851348-16851075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
803-1164
               

               
Cow position:
               
chr12:27928814-27928449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
803-1173
               

               
Cow position:
               
chr12:7205944-7205596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
803-1192
               

               
Cow position:
               
chr12:1223682-1223295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
803-1208
               

               
Cow position:
               
chr12:6240967-6241385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
803-1209
               

               
Cow position:
               
chr12:11835907-11836301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
803-1209
               

               
Cow position:
               
chr12:15122002-15122393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
803-1211
               

               
Cow position:
               
chr12:31959553-31959948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
804-1087
               

               
Cow position:
               
chr12:3039176-3039453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
804-1209
               

               
Cow position:
               
chr12:21393359-21393774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
804-1209
               

               
Cow position:
               
chr12:37770532-37770937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
806-1136
               

               
Cow position:
               
chr12:1284793-1284468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
808-1173
               

               
Cow position:
               
chr12:20312508-20312142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
808-1209
               

               
Cow position:
               
chr12:3196916-3197335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
812-1125
               

               
Cow position:
               
chr12:2242219-2241906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 145
               

               
Conread position:
               
813-1209
               

               
Cow position:
               
chr12:30745383-30745783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 180
               

               
Conread position:
               
814-1150
               

               
Cow position:
               
chr12:1343427-1343102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
814-1208
               

               
Cow position:
               
chr12:31529964-31530360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
814-1209
               

               
Cow position:
               
chr12:19691563-19691167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
815-990
               

               
Cow position:
               
chr12:22132300-22132128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
815-990
               

               
Cow position:
               
chr12:29119568-29119749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
815-1008
               

               
Cow position:
               
chr12:26777482-26777287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
815-1030
               

               
Cow position:
               
chr12:19420262-19420040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
815-1034
               

               
Cow position:
               
chr12:24755354-24755133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
815-1042
               

               
Cow position:
               
chr12:22124690-22124910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
815-1048
               

               
Cow position:
               
chr12:29486787-29487023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
815-1051
               

               
Cow position:
               
chr12:24046262-24046022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
815-1060
               

               
Cow position:
               
chr12:34385844-34385594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
815-1060
               

               
Cow position:
               
chr12:35218734-35218485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
815-1060
               

               
Cow position:
               
chr12:41979629-41979379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
815-1067
               

               
Cow position:
               
chr12:19872111-19872353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
815-1074
               

               
Cow position:
               
chr12:9414096-9413849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
815-1089
               

               
Cow position:
               
chr12:40868254-40868534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 250
               

               
Conread position:
               
815-1102
               

               
Cow position:
               
chr12:28572373-28572648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
815-1107
               

               
Cow position:
               
chr12:18937057-18937372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 270
               

               
Conread position:
               
815-1112
               

               
Cow position:
               
chr12:46143492-46143792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 252
               

               
Conread position:
               
815-1113
               

               
Cow position:
               
chr12:3070780-3071080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
815-1113
               

               
Cow position:
               
chr12:24440482-24440786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
815-1157
               

               
Cow position:
               
chr12:20377225-20377574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 270
               

               
Conread position:
               
815-1159
               

               
Cow position:
               
chr12:39486100-39486441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
815-1160
               

               
Cow position:
               
chr12:28011229-28010891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 177
               

               
Conread position:
               
815-1163
               

               
Cow position:
               
chr12:18421256-18420901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 180
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr12:24028559-24028196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 251
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr12:25259831-25259469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
30, 249
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr12:31328408-31328049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr12:36969629-36969273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr12:42061350-42061710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 251
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr12:45160839-45160491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
815-1173
               

               
Cow position:
               
chr12:15938594-15938235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
815-1175
               

               
Cow position:
               
chr12:4370906-4371274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
815-1184
               

               
Cow position:
               
chr12:45555747-45555384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
815-1186
               

               
Cow position:
               
chr12:19508899-19508515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
815-1191
               

               
Cow position:
               
chr12:34673659-34673291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
815-1192
               

               
Cow position:
               
chr12:41411685-41411303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 232
               

               
Conread position:
               
815-1193
               

               
Cow position:
               
chr12:5273449-5273069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 264
               

               
Conread position:
               
815-1193
               

               
Cow position:
               
chr12:6136910-6136532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 269
               

               
Conread position:
               
815-1193
               

               
Cow position:
               
chr12:23381889-23381502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 139
               

               
Conread position:
               
815-1193
               

               
Cow position:
               
chr12:36118641-36119016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 224
               

               
Conread position:
               
815-1193
               

               
Cow position:
               
chr12:37524865-37524471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 309
               

               
Conread position:
               
815-1201
               

               
Cow position:
               
chr12:41737472-41737864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 252
               

               
Conread position:
               
815-1202
               

               
Cow position:
               
chr12:27055277-27055665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
815-1205
               

               
Cow position:
               
chr12:15429930-15429533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 186
               

               
Conread position:
               
815-1207
               

               
Cow position:
               
chr12:7311078-7311446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
815-1207
               

               
Cow position:
               
chr12:17881542-17881926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
815-1207
               

               
Cow position:
               
chr12:42966671-42967060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 174
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr12:40807066-40807468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 218
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:5800708-5801110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:6489303-6488926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:7884982-7884614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:7960889-7960517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:9482625-9482239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:18020522-18020924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 179
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:19865912-19866309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:22516066-22515668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:27563707-27563310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:29484218-29483819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:30605483-30605099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:31429886-31429504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:34466326-34465937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr12:41580787-41581177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
815-1212
               

               
Cow position:
               
chr12:12753955-12753556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 249
               

               
Conread position:
               
816-1054
               

               
Cow position:
               
chr12:3880584-3880339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
816-1072
               

               
Cow position:
               
chr12:22261139-22260892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
816-1074
               

               
Cow position:
               
chr12:12017548-12017811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
816-1151
               

               
Cow position:
               
chr12:1245965-1246308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
816-1209
               

               
Cow position:
               
chr12:2812898-2813294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
817-1170
               

               
Cow position:
               
chr12:10461678-10462018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
817-1209
               

               
Cow position:
               
chr12:15089163-15089582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
29, 241
               

               
Conread position:
               
817-1209
               

               
Cow position:
               
chr12:29969251-29969646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
818-1115
               

               
Cow position:
               
chr12:1848865-1848560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 178
               

               
Conread position:
               
818-1186
               

               
Cow position:
               
chr12:16359547-16359908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
28, 230
               

               
Conread position:
               
819-1020
               

               
Cow position:
               
chr12:37123187-37123390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
822-1209
               

               
Cow position:
               
chr12:30170345-30170735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
823-1141
               

               
Cow position:
               
chr12:3578958-3579285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
823-1209
               

               
Cow position:
               
chr12:10895870-10895486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 166
               

               
Conread position:
               
823-1209
               

               
Cow position:
               
chr12:21486274-21486643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
823-1209
               

               
Cow position:
               
chr12:31228257-31228638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
824-1026
               

               
Cow position:
               
chr12:35136198-35136409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
824-1042
               

               
Cow position:
               
chr12:20316827-20316611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
824-1054
               

               
Cow position:
               
chr12:31925333-31925562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
824-1111
               

               
Cow position:
               
chr12:38041075-38040789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
824-1135
               

               
Cow position:
               
chr12:7147358-7147681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
23, 297
               

               
Conread position:
               
824-1204
               

               
Cow position:
               
chr12:18572316-18572686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 196
               

               
Conread position:
               
824-1206
               

               
Cow position:
               
chr12:44905316-44905691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 214
               

               
Conread position:
               
824-1208
               

               
Cow position:
               
chr12:42602557-42602178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
824-1209
               

               
Cow position:
               
chr12:1773984-1773594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
824-1209
               

               
Cow position:
               
chr12:19869150-19869527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
824-1209
               

               
Cow position:
               
chr12:47803834-47804223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 173
               

               
Conread position:
               
825-1208
               

               
Cow position:
               
chr12:35771351-35770955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 265
               

               
Conread position:
               
827-1205
               

               
Cow position:
               
chr12:33323813-33323433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
828-1186
               

               
Cow position:
               
chr12:42160868-42160515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
830-1026
               

               
Cow position:
               
chr12:7882038-7881831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
831-1208
               

               
Cow position:
               
chr12:27803361-27802984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
835-1208
               

               
Cow position:
               
chr12:17000950-17001324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
835-1209
               

               
Cow position:
               
chr12:9229790-9229433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
838-1082
               

               
Cow position:
               
chr12:18076229-18076474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
838-1164
               

               
Cow position:
               
chr12:23154772-23154456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 196
               

               
Conread position:
               
839-1062
               

               
Cow position:
               
chr12:40158543-40158317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
839-1124
               

               
Cow position:
               
chr12:26782577-26782866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 205
               

               
Conread position:
               
839-1140
               

               
Cow position:
               
chr12:4116201-4116488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
839-1146
               

               
Cow position:
               
chr12:44014144-44013836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 176
               

               
Conread position:
               
839-1153
               

               
Cow position:
               
chr12:3568643-3568952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
839-1173
               

               
Cow position:
               
chr12:12199209-12198881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
839-1176
               

               
Cow position:
               
chr12:26232952-26232614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
839-1202
               

               
Cow position:
               
chr12:18769380-18769011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
839-1205
               

               
Cow position:
               
chr12:5632178-5631819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
839-1206
               

               
Cow position:
               
chr12:29995766-29995400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
839-1208
               

               
Cow position:
               
chr12:2286277-2286646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
839-1208
               

               
Cow position:
               
chr12:35310977-35310620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
839-1209
               

               
Cow position:
               
chr12:11056572-11056943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
839-1209
               

               
Cow position:
               
chr12:30437947-30438304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
839-1209
               

               
Cow position:
               
chr12:42181445-42181062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
839-1210
               

               
Cow position:
               
chr12:4342025-4341676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
839-1212
               

               
Cow position:
               
chr12:34148655-34148288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
840-1045
               

               
Cow position:
               
chr12:1518600-1518387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
840-1136
               

               
Cow position:
               
chr12:1444051-1443743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 244
               

               
Conread position:
               
840-1186
               

               
Cow position:
               
chr12:19154914-19154570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
840-1209
               

               
Cow position:
               
chr12:44622056-44622415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
841-1170
               

               
Cow position:
               
chr12:9710506-9710180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
841-1205
               

               
Cow position:
               
chr12:20777231-20776862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
845-1007
               

               
Cow position:
               
chr12:25529732-25529903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
845-1208
               

               
Cow position:
               
chr12:4008581-4008218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
846-1032
               

               
Cow position:
               
chr12:25805407-25805219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
846-1045
               

               
Cow position:
               
chr12:44274144-44273937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
846-1060
               

               
Cow position:
               
chr12:15622753-15622527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
846-1081
               

               
Cow position:
               
chr12:794253-794501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
846-1089
               

               
Cow position:
               
chr12:29694334-29694100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
846-1107
               

               
Cow position:
               
chr12:24032709-24032971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
846-1113
               

               
Cow position:
               
chr12:5707835-5708077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
846-1113
               

               
Cow position:
               
chr12:12939227-12938947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
846-1169
               

               
Cow position:
               
chr12:20326474-20326801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
846-1170
               

               
Cow position:
               
chr12:25878715-25879047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 261
               

               
Conread position:
               
846-1170
               

               
Cow position:
               
chr12:41216762-41217094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
846-1192
               

               
Cow position:
               
chr12:30596166-30596518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
8, 209
               

               
Conread position:
               
846-1198
               

               
Cow position:
               
chr12:17079961-17080316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
846-1203
               

               
Cow position:
               
chr12:8075991-8075632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
846-1204
               

               
Cow position:
               
chr12:22881755-22882118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
846-1205
               

               
Cow position:
               
chr12:3510268-3510616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
846-1206
               

               
Cow position:
               
chr12:45814561-45814198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 228
               

               
Conread position:
               
846-1206
               

               
Cow position:
               
chr12:48415808-48415452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr12:17270246-17270599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:6411025-6410667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:15173522-15173890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:19715324-19714973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:25606394-25606773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 159
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:30805558-30805925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:30919139-30919492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:34473910-34473558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:40270383-40269999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr12:41159300-41159654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
846-1210
               

               
Cow position:
               
chr12:5905760-5906124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
846-1210
               

               
Cow position:
               
chr12:6210454-6210090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
846-1210
               

               
Cow position:
               
chr12:18577553-18577908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
847-1209
               

               
Cow position:
               
chr12:28257350-28256989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
848-998
               

               
Cow position:
               
chr12:10487750-10487900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
848-1127
               

               
Cow position:
               
chr12:22047177-22047455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
848-1140
               

               
Cow position:
               
chr12:13112245-13112540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 265
               

               
Conread position:
               
848-1170
               

               
Cow position:
               
chr12:20849720-20850022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
848-1207
               

               
Cow position:
               
chr12:3950646-3950280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 198
               

               
Conread position:
               
849-984
               

               
Cow position:
               
chr12:3600190-3600052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
849-993
               

               
Cow position:
               
chr12:27717884-27718027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
849-1006
               

               
Cow position:
               
chr12:3093287-3093126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 143
               

               
Conread position:
               
849-1006
               

               
Cow position:
               
chr12:17486431-17486270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 153
               

               
Conread position:
               
849-1020
               

               
Cow position:
               
chr12:7108894-7109071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
849-1027
               

               
Cow position:
               
chr12:4593801-4593990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
849-1039
               

               
Cow position:
               
chr12:17007903-17008102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
6, 149
               

               
Conread position:
               
849-1040
               

               
Cow position:
               
chr12:40307402-40307597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 143
               

               
Conread position:
               
849-1107
               

               
Cow position:
               
chr12:25455820-25456085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 207
               

               
Conread position:
               
849-1107
               

               
Cow position:
               
chr12:32391551-32391814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 142
               

               
Conread position:
               
849-1111
               

               
Cow position:
               
chr12:28650663-28650926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
849-1128
               

               
Cow position:
               
chr12:11583109-11583376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
849-1177
               

               
Cow position:
               
chr12:3055842-3056167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 146
               

               
Conread position:
               
849-1182
               

               
Cow position:
               
chr12:3076917-3076587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 220
               

               
Conread position:
               
849-1198
               

               
Cow position:
               
chr12:19664809-19664476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
849-1202
               

               
Cow position:
               
chr12:30688044-30688393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
849-1205
               

               
Cow position:
               
chr12:34007005-34007364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 185
               

               
Conread position:
               
849-1206
               

               
Cow position:
               
chr12:8869176-8868818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
849-1207
               

               
Cow position:
               
chr12:37994019-37993667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 143
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr12:26223278-26222922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr12:31532695-31532337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr12:42167352-42167697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 127
               

               
Conread position:
               
849-1210
               

               
Cow position:
               
chr12:8943514-8943156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 64
               

               
Conread position:
               
849-1210
               

               
Cow position:
               
chr12:9914495-9914857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 95
               

               
Conread position:
               
850-1047
               

               
Cow position:
               
chr12:31841149-31841348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
850-1125
               

               
Cow position:
               
chr12:36012900-36012630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
850-1207
               

               
Cow position:
               
chr12:46314988-46314639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 97
               

               
Conread position:
               
850-1208
               

               
Cow position:
               
chr12:30578751-30578386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 234
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr12:7977755-7978104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr12:25561078-25561436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr12:32169244-32169607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
851-1022
               

               
Cow position:
               
chr12:12976477-12976296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
851-1035
               

               
Cow position:
               
chr12:46635236-46635050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
851-1161
               

               
Cow position:
               
chr12:12682444-12682130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
851-1161
               

               
Cow position:
               
chr12:12983161-12982855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
851-1209
               

               
Cow position:
               
chr12:28582783-28582443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
851-1209
               

               
Cow position:
               
chr12:30753436-30753786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
851-1209
               

               
Cow position:
               
chr12:40910581-40910219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
852-1108
               

               
Cow position:
               
chr12:8922078-8921819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
852-1170
               

               
Cow position:
               
chr12:43476065-43476376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 165
               

               
Conread position:
               
853-989
               

               
Cow position:
               
chr12:4190884-4191021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
853-991
               

               
Cow position:
               
chr12:21222413-21222275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
853-998
               

               
Cow position:
               
chr12:3160775-3160924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
853-1021
               

               
Cow position:
               
chr12:29762888-29762715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
853-1028
               

               
Cow position:
               
chr12:36954664-36954487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
853-1040
               

               
Cow position:
               
chr12:5134850-5135044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
853-1043
               

               
Cow position:
               
chr12:6687580-6687764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
853-1044
               

               
Cow position:
               
chr12:5863290-5863469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
853-1047
               

               
Cow position:
               
chr12:3615601-3615792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
853-1058
               

               
Cow position:
               
chr12:4134376-4134588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
853-1069
               

               
Cow position:
               
chr12:17982341-17982547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
853-1102
               

               
Cow position:
               
chr12:40008622-40008872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 223
               

               
Conread position:
               
853-1105
               

               
Cow position:
               
chr12:44766794-44767040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
853-1107
               

               
Cow position:
               
chr12:34103424-34103165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
853-1117
               

               
Cow position:
               
chr12:34274175-34274441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 212
               

               
Conread position:
               
853-1133
               

               
Cow position:
               
chr12:17495481-17495217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
853-1141
               

               
Cow position:
               
chr12:6698491-6698781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
853-1157
               

               
Cow position:
               
chr12:6164318-6164007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
853-1170
               

               
Cow position:
               
chr12:41091240-41091561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
22, 190
               

               
Conread position:
               
853-1173
               

               
Cow position:
               
chr12:31060272-31059952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 220
               

               
Conread position:
               
853-1177
               

               
Cow position:
               
chr12:16605935-16605638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
853-1192
               

               
Cow position:
               
chr12:5899238-5899561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
853-1200
               

               
Cow position:
               
chr12:16543857-16543522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
853-1205
               

               
Cow position:
               
chr12:17031332-17031677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
853-1205
               

               
Cow position:
               
chr12:41083777-41084119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 139
               

               
Conread position:
               
853-1206
               

               
Cow position:
               
chr12:18518382-18518737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
853-1206
               

               
Cow position:
               
chr12:40110100-40110435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
853-1207
               

               
Cow position:
               
chr12:9143103-9143452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr12:3757326-3756981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr12:12304112-12304446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
218, 80
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr12:15358039-15358405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 356
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr12:18123398-18123735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:2711203-2711565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 260
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:4866527-4866884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:11109481-11109821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:26869085-26868747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:32714752-32715111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 139
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:33457860-33458214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:35368354-35368709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:41473806-41474156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:42254369-42254734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 266
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr12:47928925-47929267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
853-1210
               

               
Cow position:
               
chr12:5714340-5714696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
853-1210
               

               
Cow position:
               
chr12:7000878-7000537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
853-1212
               

               
Cow position:
               
chr12:20479601-20479268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
853-1212
               

               
Cow position:
               
chr12:30590488-30590837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
854-1107
               

               
Cow position:
               
chr12:32399908-32400168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
854-1113
               

               
Cow position:
               
chr12:19039899-19039639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
854-1209
               

               
Cow position:
               
chr12:19502708-19502361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 139
               

               
Conread position:
               
854-1209
               

               
Cow position:
               
chr12:44518023-44517671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
855-1107
               

               
Cow position:
               
chr12:41214605-41214355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 29
               

               
Conread position:
               
855-1207
               

               
Cow position:
               
chr12:18943929-18943593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
855-1208
               

               
Cow position:
               
chr12:27563123-27562776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
856-1177
               

               
Cow position:
               
chr12:22285386-22285087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
857-1074
               

               
Cow position:
               
chr12:18417278-18417503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
857-1083
               

               
Cow position:
               
chr12:38010330-38010116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
857-1087
               

               
Cow position:
               
chr12:17472505-17472278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
857-1125
               

               
Cow position:
               
chr12:29411772-29411504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
857-1162
               

               
Cow position:
               
chr12:12178636-12178943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
857-1170
               

               
Cow position:
               
chr12:3473275-3472970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
857-1170
               

               
Cow position:
               
chr12:19125112-19124810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
857-1171
               

               
Cow position:
               
chr12:36313580-36313881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
857-1207
               

               
Cow position:
               
chr12:17716799-17717127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
857-1208
               

               
Cow position:
               
chr12:15530780-15531120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
857-1209
               

               
Cow position:
               
chr12:14132029-14131703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
857-1209
               

               
Cow position:
               
chr12:21922151-21922517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
857-1209
               

               
Cow position:
               
chr12:37727862-37728211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
857-1209
               

               
Cow position:
               
chr12:37733062-37732713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
860-1060
               

               
Cow position:
               
chr12:18081825-18081631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
860-1156
               

               
Cow position:
               
chr12:3956057-3955759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
860-1192
               

               
Cow position:
               
chr12:5797826-5797512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
860-1208
               

               
Cow position:
               
chr12:18388564-18388225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
860-1209
               

               
Cow position:
               
chr12:36501235-36500880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 183
               

               
Conread position:
               
860-1209
               

               
Cow position:
               
chr12:42698506-42698179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
861-1205
               

               
Cow position:
               
chr12:44596096-44595747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
861-1209
               

               
Cow position:
               
chr12:25320642-25320981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
862-1170
               

               
Cow position:
               
chr12:30728519-30728218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 156
               

               
Conread position:
               
862-1204
               

               
Cow position:
               
chr12:21045339-21045005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
862-1209
               

               
Cow position:
               
chr12:45820637-45820299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
863-1201
               

               
Cow position:
               
chr12:24559074-24559417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
864-1125
               

               
Cow position:
               
chr12:44846115-44846371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
864-1209
               

               
Cow position:
               
chr12:42879429-42879760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
865-1147
               

               
Cow position:
               
chr12:34429420-34429151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
865-1201
               

               
Cow position:
               
chr12:12331776-12331451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 71
               

               
Conread position:
               
865-1208
               

               
Cow position:
               
chr12:29780177-29779848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 159
               

               
Conread position:
               
865-1209
               

               
Cow position:
               
chr12:34332829-34333177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
865-1211
               

               
Cow position:
               
chr12:6720044-6720398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
866-1209
               

               
Cow position:
               
chr12:30662226-30661883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 196
               

               
Conread position:
               
867-1170
               

               
Cow position:
               
chr12:15783659-15783949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
867-1203
               

               
Cow position:
               
chr12:28559021-28559355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
867-1209
               

               
Cow position:
               
chr12:5635718-5635386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
868-1107
               

               
Cow position:
               
chr12:34089559-34089810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
868-1133
               

               
Cow position:
               
chr12:35354511-35354774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
868-1209
               

               
Cow position:
               
chr12:39465305-39465646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
869-1019
               

               
Cow position:
               
chr12:33297574-33297728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
871-1206
               

               
Cow position:
               
chr12:17774538-17774857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
874-1107
               

               
Cow position:
               
chr12:17702500-17702260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
874-1140
               

               
Cow position:
               
chr12:12700042-12699766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 202
               

               
Conread position:
               
874-1146
               

               
Cow position:
               
chr12:8710564-8710825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
874-1209
               

               
Cow position:
               
chr12:25177861-25177531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
875-1170
               

               
Cow position:
               
chr12:45363092-45363389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
62, 150
               

               
Conread position:
               
876-1067
               

               
Cow position:
               
chr12:28804728-28804922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
876-1101
               

               
Cow position:
               
chr12:3994684-3994918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
878-982
               

               
Cow position:
               
chr12:20283647-20283751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
878-1140
               

               
Cow position:
               
chr12:24107801-24107547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
878-1170
               

               
Cow position:
               
chr12:17625081-17624797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
878-1207
               

               
Cow position:
               
chr12:46333099-46333409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
879-1086
               

               
Cow position:
               
chr12:29162073-29161870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
879-1209
               

               
Cow position:
               
chr12:42283099-42282769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
880-1113
               

               
Cow position:
               
chr12:4182957-4182720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
6, 187
               

               
Conread position:
               
881-1209
               

               
Cow position:
               
chr12:5940083-5940408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 180
               

               
Conread position:
               
883-1170
               

               
Cow position:
               
chr12:6275361-6275072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 180
               

               
Conread position:
               
884-1192
               

               
Cow position:
               
chr12:38484654-38484344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
884-1209
               

               
Cow position:
               
chr12:23797847-23798166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 108
               

               
Conread position:
               
885-1055
               

               
Cow position:
               
chr12:27938659-27938827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
885-1168
               

               
Cow position:
               
chr12:40029010-40028728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 77
               

               
Conread position:
               
886-1153
               

               
Cow position:
               
chr12:13996290-13996010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
17, 174
               

               
Conread position:
               
886-1192
               

               
Cow position:
               
chr12:30064690-30064985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
886-1205
               

               
Cow position:
               
chr12:15240978-15240673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
153, 101
               

               
Conread position:
               
886-1208
               

               
Cow position:
               
chr12:24024045-24023736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 21
               

               
Conread position:
               
886-1208
               

               
Cow position:
               
chr12:44602249-44602571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
887-1104
               

               
Cow position:
               
chr12:6226900-6226689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
887-1209
               

               
Cow position:
               
chr12:35780180-35779856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
888-1209
               

               
Cow position:
               
chr12:28213266-28213576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
890-1171
               

               
Cow position:
               
chr12:26328294-26328000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
891-1209
               

               
Cow position:
               
chr12:18766230-18765906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
892-1056
               

               
Cow position:
               
chr12:1093022-1092849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
892-1133
               

               
Cow position:
               
chr12:43351592-43351823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
892-1158
               

               
Cow position:
               
chr12:26317218-26317481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
171, 30
               

               
Conread position:
               
893-1020
               

               
Cow position:
               
chr12:19372353-19372224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
893-1092
               

               
Cow position:
               
chr12:46673477-46673279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
893-1170
               

               
Cow position:
               
chr12:20075340-20075607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
894-1157
               

               
Cow position:
               
chr12:37190072-37190330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
894-1208
               

               
Cow position:
               
chr12:24211170-24211473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
894-1209
               

               
Cow position:
               
chr12:23574524-23574830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 89
               

               
Conread position:
               
895-1191
               

               
Cow position:
               
chr12:8595645-8595949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
896-1199
               

               
Cow position:
               
chr12:731179-730883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
896-1201
               

               
Cow position:
               
chr12:5658320-5658018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
50, 172
               

               
Conread position:
               
896-1207
               

               
Cow position:
               
chr12:29770817-29770514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 91
               

               
Conread position:
               
897-1187
               

               
Cow position:
               
chr12:42954137-42953855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
897-1209
               

               
Cow position:
               
chr12:34161174-34161480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
898-1065
               

               
Cow position:
               
chr12:36568299-36568136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
900-1118
               

               
Cow position:
               
chr12:15991543-15991330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
900-1135
               

               
Cow position:
               
chr12:43582538-43582768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
131, 36
               

               
Conread position:
               
900-1142
               

               
Cow position:
               
chr12:12031075-12030828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 215
               

               
Conread position:
               
900-1167
               

               
Cow position:
               
chr12:22287038-22287298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
902-1208
               

               
Cow position:
               
chr12:4162609-4162289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
903-1043
               

               
Cow position:
               
chr12:13156436-13156580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
6, 89
               

               
Conread position:
               
903-1046
               

               
Cow position:
               
chr12:24180660-24180802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
903-1170
               

               
Cow position:
               
chr12:20071822-20071545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 217
               

               
Conread position:
               
903-1172
               

               
Cow position:
               
chr12:35669703-35669440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
183, 31
               

               
Conread position:
               
903-1202
               

               
Cow position:
               
chr12:1889817-1889518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
187, 84
               

               
Conread position:
               
903-1205
               

               
Cow position:
               
chr12:35377962-35378264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
903-1209
               

               
Cow position:
               
chr12:30476240-30476574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
904-1173
               

               
Cow position:
               
chr12:5459027-5459280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
904-1209
               

               
Cow position:
               
chr12:18103830-18103545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
906-1207
               

               
Cow position:
               
chr12:15162915-15163204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
907-1142
               

               
Cow position:
               
chr12:38454685-38454909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
907-1208
               

               
Cow position:
               
chr12:29899670-29899358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
908-1177
               

               
Cow position:
               
chr12:30802978-30803249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 83
               

               
Conread position:
               
908-1206
               

               
Cow position:
               
chr12:18964162-18963864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
909-1209
               

               
Cow position:
               
chr12:24662884-24663181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
909-1210
               

               
Cow position:
               
chr12:12579256-12578964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
286, 152
               

               
Conread position:
               
910-1087
               

               
Cow position:
               
chr12:15768181-15768358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
910-1129
               

               
Cow position:
               
chr12:6117670-6117892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
912-1103
               

               
Cow position:
               
chr12:25820661-25820468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
912-1170
               

               
Cow position:
               
chr12:28748706-28748969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
912-1184
               

               
Cow position:
               
chr12:3906240-3906516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 199
               

               
Conread position:
               
912-1209
               

               
Cow position:
               
chr12:27037677-27037383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
916-1106
               

               
Cow position:
               
chr12:44559362-44559553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
916-1107
               

               
Cow position:
               
chr12:18021369-18021558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
916-1110
               

               
Cow position:
               
chr12:38512066-38511867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
916-1200
               

               
Cow position:
               
chr12:25452666-25452389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
916-1208
               

               
Cow position:
               
chr12:4596225-4596530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
917-1209
               

               
Cow position:
               
chr12:33129041-33129321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
918-1209
               

               
Cow position:
               
chr12:25280714-25280435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
168, 11
               

               
Conread position:
               
919-1129
               

               
Cow position:
               
chr12:3056840-3057051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
919-1156
               

               
Cow position:
               
chr12:15763131-15762897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
919-1171
               

               
Cow position:
               
chr12:37088709-37088954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
919-1185
               

               
Cow position:
               
chr12:31947902-31948161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
239, 35
               

               
Conread position:
               
919-1208
               

               
Cow position:
               
chr12:43705800-43705516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
920-1129
               

               
Cow position:
               
chr12:3060310-3060100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
920-1206
               

               
Cow position:
               
chr12:17636410-17636682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
920-1209
               

               
Cow position:
               
chr12:30210258-30210550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
920-1209
               

               
Cow position:
               
chr12:36544869-36544575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
149, 67
               

               
Conread position:
               
921-1208
               

               
Cow position:
               
chr12:38053625-38053913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
922-1208
               

               
Cow position:
               
chr12:15204612-15204906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 227
               

               
Conread position:
               
925-1140
               

               
Cow position:
               
chr12:4714160-4714359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
925-1209
               

               
Cow position:
               
chr12:33851140-33851424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
926-1040
               

               
Cow position:
               
chr12:19243894-19243780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 6
               

               
Conread position:
               
926-1110
               

               
Cow position:
               
chr12:6121141-6121333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
926-1202
               

               
Cow position:
               
chr12:32413298-32413575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
926-1207
               

               
Cow position:
               
chr12:4085707-4085957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
249, 9
               

               
Conread position:
               
926-1208
               

               
Cow position:
               
chr12:1030771-1031045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
926-1208
               

               
Cow position:
               
chr12:22539987-22540273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
926-1209
               

               
Cow position:
               
chr12:10575389-10575671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
927-1113
               

               
Cow position:
               
chr12:34533572-34533393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 20
               

               
Conread position:
               
928-1210
               

               
Cow position:
               
chr12:42162827-42163108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
931-1087
               

               
Cow position:
               
chr12:2805253-2805103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
934-1177
               

               
Cow position:
               
chr12:18550676-18550916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
937-1185
               

               
Cow position:
               
chr12:13066315-13066549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
939-1047
               

               
Cow position:
               
chr12:42477552-42477660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
939-1058
               

               
Cow position:
               
chr12:31882147-31882264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
939-1124
               

               
Cow position:
               
chr12:37584297-37584476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
939-1126
               

               
Cow position:
               
chr12:37536690-37536506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
939-1209
               

               
Cow position:
               
chr12:30194508-30194768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
940-1205
               

               
Cow position:
               
chr12:25917463-25917214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
940-1207
               

               
Cow position:
               
chr12:17879502-17879237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
941-1047
               

               
Cow position:
               
chr12:32334207-32334101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
941-1205
               

               
Cow position:
               
chr12:45680072-45680340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
942-1130
               

               
Cow position:
               
chr12:2670065-2670254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 156
               

               
Conread position:
               
943-1209
               

               
Cow position:
               
chr12:6485402-6485146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
944-1088
               

               
Cow position:
               
chr12:24182652-24182798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
944-1125
               

               
Cow position:
               
chr12:5638947-5639131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
944-1208
               

               
Cow position:
               
chr12:7299664-7299393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
944-1209
               

               
Cow position:
               
chr12:4768730-4768992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
947-1102
               

               
Cow position:
               
chr12:30227421-30227268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
947-1203
               

               
Cow position:
               
chr12:10491078-10491332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
947-1207
               

               
Cow position:
               
chr12:33976010-33976264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 13
               

               
Conread position:
               
948-1208
               

               
Cow position:
               
chr12:13643044-13643297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
948-1208
               

               
Cow position:
               
chr12:28131392-28131654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
948-1209
               

               
Cow position:
               
chr12:25444733-25444981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
948-1209
               

               
Cow position:
               
chr12:46714177-46714436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 114
               

               
Conread position:
               
949-1205
               

               
Cow position:
               
chr12:11587576-11587837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
949-1208
               

               
Cow position:
               
chr12:38774431-38774177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
950-1106
               

               
Cow position:
               
chr12:7191452-7191297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
950-1153
               

               
Cow position:
               
chr12:29921973-29921774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
950-1170
               

               
Cow position:
               
chr12:30804166-30803953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
957-1209
               

               
Cow position:
               
chr12:23855652-23855899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 155
               

               
Conread position:
               
957-1209
               

               
Cow position:
               
chr12:42685130-42684878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
958-1191
               

               
Cow position:
               
chr12:12637370-12637134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 154
               

               
Conread position:
               
959-1208
               

               
Cow position:
               
chr12:19507451-19507703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
119, 28
               

               
Conread position:
               
962-1208
               

               
Cow position:
               
chr12:35123714-35123954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
963-1209
               

               
Cow position:
               
chr12:27365749-27365993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
963-1209
               

               
Cow position:
               
chr12:44919857-44920097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
965-1205
               

               
Cow position:
               
chr12:25110611-25110378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
965-1207
               

               
Cow position:
               
chr12:25340338-25340594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
965-1210
               

               
Cow position:
               
chr12:23916667-23916910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 146
               

               
Conread position:
               
966-1170
               

               
Cow position:
               
chr12:15415047-15414839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
966-1173
               

               
Cow position:
               
chr12:20636333-20636121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
966-1205
               

               
Cow position:
               
chr12:32051336-32051572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
966-1208
               

               
Cow position:
               
chr12:8759146-8759393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 108
               

               
Conread position:
               
966-1209
               

               
Cow position:
               
chr12:42174240-42174483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
967-1107
               

               
Cow position:
               
chr12:20354796-20354942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
967-1208
               

               
Cow position:
               
chr12:42233883-42234125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
968-1207
               

               
Cow position:
               
chr12:6242348-6242115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
968-1209
               

               
Cow position:
               
chr12:4719773-4720014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
969-1170
               

               
Cow position:
               
chr12:1998971-1998773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
969-1209
               

               
Cow position:
               
chr12:3623523-3623761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
970-1208
               

               
Cow position:
               
chr12:11546860-11547105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
972-1170
               

               
Cow position:
               
chr12:40360519-40360715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
973-1111
               

               
Cow position:
               
chr12:28029763-28029900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
973-1179
               

               
Cow position:
               
chr12:18420303-18420506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
973-1207
               

               
Cow position:
               
chr12:42784140-42784377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
973-1208
               

               
Cow position:
               
chr12:24165410-24165646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
974-1198
               

               
Cow position:
               
chr12:9894616-9894838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
974-1202
               

               
Cow position:
               
chr12:15230981-15230757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
974-1209
               

               
Cow position:
               
chr12:15050784-15050558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
104, 134
               

               
Conread position:
               
975-1208
               

               
Cow position:
               
chr12:15103099-15103339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 230
               

               
Conread position:
               
976-1209
               

               
Cow position:
               
chr12:25188023-25188255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
977-1170
               

               
Cow position:
               
chr12:41658886-41658697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
977-1209
               

               
Cow position:
               
chr12:36790974-36790745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
978-1209
               

               
Cow position:
               
chr12:41216046-41215818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
979-1168
               

               
Cow position:
               
chr12:15039137-15038950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
979-1169
               

               
Cow position:
               
chr12:6102991-6102801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
979-1192
               

               
Cow position:
               
chr12:3599914-3599710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
979-1209
               

               
Cow position:
               
chr12:37170104-37169879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
981-1208
               

               
Cow position:
               
chr12:28210426-28210214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
981-1209
               

               
Cow position:
               
chr12:12300761-12300986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 85
               

               
Conread position:
               
982-1209
               

               
Cow position:
               
chr12:23446561-23446787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
983-1156
               

               
Cow position:
               
chr12:22124889-22125062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 145
               

               
Conread position:
               
983-1209
               

               
Cow position:
               
chr12:22485661-22485873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
983-1209
               

               
Cow position:
               
chr12:31517325-31517104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
984-1136
               

               
Cow position:
               
chr12:43551424-43551263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
984-1208
               

               
Cow position:
               
chr12:25027929-25027693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 226
               

               
Conread position:
               
984-1208
               

               
Cow position:
               
chr12:25809266-25809494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
984-1209
               

               
Cow position:
               
chr12:4820800-4821028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
146, 10
               

               
Conread position:
               
984-1209
               

               
Cow position:
               
chr12:46120987-46120765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
125, 101
               

               
Conread position:
               
985-1209
               

               
Cow position:
               
chr12:34165431-34165649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
986-1209
               

               
Cow position:
               
chr12:23836168-23836396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
987-1156
               

               
Cow position:
               
chr12:22132098-22131929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 141
               

               
Conread position:
               
987-1170
               

               
Cow position:
               
chr12:7539945-7539755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
987-1208
               

               
Cow position:
               
chr12:13988217-13988435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
987-1208
               

               
Cow position:
               
chr12:38184443-38184659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
988-1170
               

               
Cow position:
               
chr12:42100006-42099830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
988-1209
               

               
Cow position:
               
chr12:38126672-38126457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
989-1209
               

               
Cow position:
               
chr12:26217978-26217757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
990-1209
               

               
Cow position:
               
chr12:17269648-17269869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
990-1209
               

               
Cow position:
               
chr12:24032350-24032563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
991-1200
               

               
Cow position:
               
chr12:19400960-19400759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
993-1209
               

               
Cow position:
               
chr12:19258131-19258344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
993-1209
               

               
Cow position:
               
chr12:37008853-37008640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 118
               

               
Conread position:
               
994-1206
               

               
Cow position:
               
chr12:16670118-16670330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
994-1208
               

               
Cow position:
               
chr12:45090505-45090286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
995-1209
               

               
Cow position:
               
chr12:9767020-9766810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
995-1209
               

               
Cow position:
               
chr12:24116510-24116296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
996-1209
               

               
Cow position:
               
chr12:3372004-3371791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
997-1209
               

               
Cow position:
               
chr12:7110056-7110264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1000-1209
               

               
Cow position:
               
chr12:15699933-15700147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
1002-1209
               

               
Cow position:
               
chr12:10942146-10942354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
1004-1205
               

               
Cow position:
               
chr12:29675274-29675079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
1004-1208
               

               
Cow position:
               
chr12:38852167-38851960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
1006-1203
               

               
Cow position:
               
chr12:1333094-1333292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
1007-1209
               

               
Cow position:
               
chr12:44733225-44733025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1012-1202
               

               
Cow position:
               
chr12:10763135-10763317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1012-1209
               

               
Cow position:
               
chr12:24152208-24152407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
1013-1162
               

               
Cow position:
               
chr12:25192924-25193070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1013-1173
               

               
Cow position:
               
chr12:37137651-37137495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
1016-1209
               

               
Cow position:
               
chr12:16056985-16056791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
1017-1209
               

               
Cow position:
               
chr12:14222852-14223048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
1017-1209
               

               
Cow position:
               
chr12:19261074-19261262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
1018-1209
               

               
Cow position:
               
chr12:24222641-24222454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1024-1205
               

               
Cow position:
               
chr12:26750076-26749889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
1024-1209
               

               
Cow position:
               
chr12:21780047-21780229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
151, 46
               

               
Conread position:
               
1025-1212
               

               
Cow position:
               
chr12:31269034-31269224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
1026-1209
               

               
Cow position:
               
chr12:16147370-16147556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
1028-1209
               

               
Cow position:
               
chr12:35241214-35241039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1031-1209
               

               
Cow position:
               
chr12:18523453-18523636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
1033-1208
               

               
Cow position:
               
chr12:42285860-42286036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
1034-1209
               

               
Cow position:
               
chr12:5609618-5609445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
1035-1209
               

               
Cow position:
               
chr12:33319774-33319601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
1036-1209
               

               
Cow position:
               
chr12:37514386-37514215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
1051-1198
               

               
Cow position:
               
chr12:6687801-6687949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
1051-1209
               

               
Cow position:
               
chr12:3615910-3616064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
1054-1209
               

               
Cow position:
               
chr12:4134990-4135144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1056-1209
               

               
Cow position:
               
chr12:3880066-3879913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
1066-1209
               

               
Cow position:
               
chr12:36994191-36994049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1075-1209
               

               
Cow position:
               
chr12:29057323-29057456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1075-1209
               

               
Cow position:
               
chr12:39663266-39663133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr12:4594437-4594572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr12:4793133-4793264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr12:4797236-4797367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr12:6754132-6754263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr12:15260699-15260829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr12:45168083-45167953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1078-1209
               

               
Cow position:
               
chr12:33948841-33948971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1079-1209
               

               
Cow position:
               
chr12:7457605-7457478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1079-1209
               

               
Cow position:
               
chr12:45002129-45002001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1085-1209
               

               
Cow position:
               
chr12:1701862-1701738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
1090-1209
               

               
Cow position:
               
chr12:3586067-3586185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1093-1209
               

               
Cow position:
               
chr12:22859419-22859530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1093-1209
               

               
Cow position:
               
chr12:43854846-43854960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1099-1208
               

               
Cow position:
               
chr12:27572282-27572174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1099-1209
               

               
Cow position:
               
chr12:44542221-44542333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
1117-1209
               

               
Cow position:
               
chr12:27430481-27430573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1117-1210
               

               
Cow position:
               
chr12:20355190-20355283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.