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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010J08.3
        

               
Conread position:
               
798-1209
               

               
Cow position:
               
chr21:25764388-25764804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
800-1106
               

               
Cow position:
               
chr21:42913986-42913676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
801-1206
               

               
Cow position:
               
chr21:45971398-45971008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
802-1170
               

               
Cow position:
               
chr21:13111036-13110667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
803-985
               

               
Cow position:
               
chr21:17218852-17218668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
803-1086
               

               
Cow position:
               
chr21:40058568-40058854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
803-1170
               

               
Cow position:
               
chr21:150238-150606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
803-1177
               

               
Cow position:
               
chr21:7564560-7564170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
803-1208
               

               
Cow position:
               
chr21:725128-724711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
803-1209
               

               
Cow position:
               
chr21:12153895-12154297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 38
               

               
Conread position:
               
803-1209
               

               
Cow position:
               
chr21:36762815-36763230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
803-1209
               

               
Cow position:
               
chr21:44826113-44825717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
804-1083
               

               
Cow position:
               
chr21:8289878-8289590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
804-1124
               

               
Cow position:
               
chr21:8985312-8985636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
804-1161
               

               
Cow position:
               
chr21:28998144-28997781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
804-1166
               

               
Cow position:
               
chr21:2367103-2367458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
804-1167
               

               
Cow position:
               
chr21:3920449-3920084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
804-1170
               

               
Cow position:
               
chr21:1196630-1197001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
804-1209
               

               
Cow position:
               
chr21:6713775-6713354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
804-1209
               

               
Cow position:
               
chr21:7672896-7673289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
804-1209
               

               
Cow position:
               
chr21:38120866-38121270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 160
               

               
Conread position:
               
804-1209
               

               
Cow position:
               
chr21:39888981-39888569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
804-1209
               

               
Cow position:
               
chr21:49700273-49699871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
805-1210
               

               
Cow position:
               
chr21:42384272-42384678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
806-1208
               

               
Cow position:
               
chr21:13727993-13727596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
806-1209
               

               
Cow position:
               
chr21:30592529-30592140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
808-981
               

               
Cow position:
               
chr21:35899576-35899753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
808-1157
               

               
Cow position:
               
chr21:24222772-24222420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
808-1208
               

               
Cow position:
               
chr21:19766620-19767021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
811-1056
               

               
Cow position:
               
chr21:16166866-16166622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 125
               

               
Conread position:
               
811-1111
               

               
Cow position:
               
chr21:17410891-17410587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
34, 184
               

               
Conread position:
               
811-1205
               

               
Cow position:
               
chr21:9416009-9416416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 310
               

               
Conread position:
               
811-1209
               

               
Cow position:
               
chr21:643104-643493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
811-1209
               

               
Cow position:
               
chr21:4399567-4399972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 141
               

               
Conread position:
               
812-1099
               

               
Cow position:
               
chr21:18494736-18495030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 182
               

               
Conread position:
               
812-1099
               

               
Cow position:
               
chr21:28993857-28993564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 184
               

               
Conread position:
               
812-1189
               

               
Cow position:
               
chr21:32574503-32574879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
812-1202
               

               
Cow position:
               
chr21:21223060-21223443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
28, 182
               

               
Conread position:
               
814-1105
               

               
Cow position:
               
chr21:21216370-21216075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 176
               

               
Conread position:
               
814-1164
               

               
Cow position:
               
chr21:5482522-5482879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 160
               

               
Conread position:
               
815-971
               

               
Cow position:
               
chr21:12338944-12339104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
815-989
               

               
Cow position:
               
chr21:22140565-22140388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
815-990
               

               
Cow position:
               
chr21:18713058-18713235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
815-991
               

               
Cow position:
               
chr21:36711971-36712151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
815-1007
               

               
Cow position:
               
chr21:4279404-4279601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
815-1013
               

               
Cow position:
               
chr21:30626411-30626205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
815-1023
               

               
Cow position:
               
chr21:17282475-17282689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
815-1034
               

               
Cow position:
               
chr21:7132690-7132466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 165
               

               
Conread position:
               
815-1040
               

               
Cow position:
               
chr21:4189606-4189837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
815-1045
               

               
Cow position:
               
chr21:23683322-23683554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
815-1045
               

               
Cow position:
               
chr21:42348906-42348668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
815-1056
               

               
Cow position:
               
chr21:33419943-33419706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
815-1059
               

               
Cow position:
               
chr21:23478945-23478697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
815-1061
               

               
Cow position:
               
chr21:42464069-42463812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
815-1064
               

               
Cow position:
               
chr21:34738370-34738635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
815-1070
               

               
Cow position:
               
chr21:393793-394050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
30, 181
               

               
Conread position:
               
815-1070
               

               
Cow position:
               
chr21:17412520-17412268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
815-1070
               

               
Cow position:
               
chr21:48484668-48484416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
815-1082
               

               
Cow position:
               
chr21:42905603-42905332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
815-1094
               

               
Cow position:
               
chr21:16789493-16789778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 224
               

               
Conread position:
               
815-1104
               

               
Cow position:
               
chr21:31702184-31701893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
815-1113
               

               
Cow position:
               
chr21:23984512-23984207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 222
               

               
Conread position:
               
815-1124
               

               
Cow position:
               
chr21:28881921-28882222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
815-1125
               

               
Cow position:
               
chr21:13897965-13898273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
815-1130
               

               
Cow position:
               
chr21:6764930-6764610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
815-1130
               

               
Cow position:
               
chr21:16612401-16612717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
815-1130
               

               
Cow position:
               
chr21:20925734-20925413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 281
               

               
Conread position:
               
815-1130
               

               
Cow position:
               
chr21:47802490-47802169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
815-1134
               

               
Cow position:
               
chr21:41957402-41957085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
815-1140
               

               
Cow position:
               
chr21:33235570-33235904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 250
               

               
Conread position:
               
815-1141
               

               
Cow position:
               
chr21:2359664-2359991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 134
               

               
Conread position:
               
815-1153
               

               
Cow position:
               
chr21:15867087-15867427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
815-1155
               

               
Cow position:
               
chr21:13410051-13409716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
815-1156
               

               
Cow position:
               
chr21:426564-426923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 235
               

               
Conread position:
               
815-1158
               

               
Cow position:
               
chr21:20262562-20262217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
24, 178
               

               
Conread position:
               
815-1162
               

               
Cow position:
               
chr21:10727053-10727399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
815-1164
               

               
Cow position:
               
chr21:4267578-4267223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 250
               

               
Conread position:
               
815-1165
               

               
Cow position:
               
chr21:10967005-10967357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 249
               

               
Conread position:
               
815-1167
               

               
Cow position:
               
chr21:36163191-36162832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 301
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr21:12366159-12366501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
30, 191
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr21:17144920-17145282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 250
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr21:27607591-27607229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 250
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr21:28477397-28477759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr21:33729205-33729560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr21:40786442-40786807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
24, 205
               

               
Conread position:
               
815-1170
               

               
Cow position:
               
chr21:40899108-40899469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
24, 181
               

               
Conread position:
               
815-1173
               

               
Cow position:
               
chr21:27124356-27123988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
815-1174
               

               
Cow position:
               
chr21:24130853-24131203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 176
               

               
Conread position:
               
815-1175
               

               
Cow position:
               
chr21:10071157-10070792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
815-1182
               

               
Cow position:
               
chr21:23821940-23822297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
30, 176
               

               
Conread position:
               
815-1190
               

               
Cow position:
               
chr21:35897849-35897476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
815-1191
               

               
Cow position:
               
chr21:42540448-42540071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
815-1193
               

               
Cow position:
               
chr21:47760549-47760921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
815-1198
               

               
Cow position:
               
chr21:41878248-41878627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
815-1201
               

               
Cow position:
               
chr21:5566763-5567147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 167
               

               
Conread position:
               
815-1203
               

               
Cow position:
               
chr21:36642679-36643069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 151
               

               
Conread position:
               
815-1205
               

               
Cow position:
               
chr21:3236304-3236675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
815-1205
               

               
Cow position:
               
chr21:34010618-34010232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
815-1207
               

               
Cow position:
               
chr21:8351529-8351126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
815-1207
               

               
Cow position:
               
chr21:22719008-22718617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 218
               

               
Conread position:
               
815-1207
               

               
Cow position:
               
chr21:33209971-33210355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:5971064-5970671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:8126020-8125637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:16696142-16696540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:17511548-17511945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:19614945-19615343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:23606446-23606839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
24, 219
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:23672518-23672913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:30990496-30990119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:33263623-33264012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:36297251-36297661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 188
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:38900545-38900941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 182
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:42500803-42501218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:47823495-47823101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
815-1208
               

               
Cow position:
               
chr21:48291258-48290890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:81842-82236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 186
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:395650-396036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:5153389-5153789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 245
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:10151567-10151974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 153
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:11740360-11739951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:14760356-14760734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:18568876-18568470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:24858083-24858484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:25344650-25345030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:27230020-27229626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:28734140-28733744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:29069556-29069157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 176
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:31691253-31691651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:32297730-32297350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:37299237-37299631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:38691962-38692365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:39403766-39403356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 311
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:41974607-41974209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 181
               

               
Conread position:
               
815-1209
               

               
Cow position:
               
chr21:44671525-44671913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
815-1210
               

               
Cow position:
               
chr21:5392766-5392365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
816-997
               

               
Cow position:
               
chr21:28919850-28919659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
816-1064
               

               
Cow position:
               
chr21:29942778-29943027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 177
               

               
Conread position:
               
816-1088
               

               
Cow position:
               
chr21:12973480-12973190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
816-1130
               

               
Cow position:
               
chr21:5455209-5454901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
816-1155
               

               
Cow position:
               
chr21:46829491-46829157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
816-1163
               

               
Cow position:
               
chr21:38867801-38867465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
816-1173
               

               
Cow position:
               
chr21:6833825-6834182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
816-1208
               

               
Cow position:
               
chr21:2679324-2679716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 181
               

               
Conread position:
               
816-1209
               

               
Cow position:
               
chr21:28810484-28810093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
816-1209
               

               
Cow position:
               
chr21:44252051-44251674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
817-1060
               

               
Cow position:
               
chr21:40244208-40244461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
817-1159
               

               
Cow position:
               
chr21:23150245-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
818-1018
               

               
Cow position:
               
chr21:34254507-34254300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
818-1202
               

               
Cow position:
               
chr21:41155637-41156032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
818-1208
               

               
Cow position:
               
chr21:19196393-19195997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 266
               

               
Conread position:
               
820-1170
               

               
Cow position:
               
chr21:13316159-13316517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
820-1170
               

               
Cow position:
               
chr21:18289436-18289793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 176
               

               
Conread position:
               
823-1047
               

               
Cow position:
               
chr21:24714434-24714665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
823-1191
               

               
Cow position:
               
chr21:33997441-33997076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 114
               

               
Conread position:
               
824-1001
               

               
Cow position:
               
chr21:31278563-31278740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
824-1059
               

               
Cow position:
               
chr21:34658815-34659054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
824-1136
               

               
Cow position:
               
chr21:24864936-24865257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 191
               

               
Conread position:
               
824-1137
               

               
Cow position:
               
chr21:44108790-44109100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
824-1156
               

               
Cow position:
               
chr21:24607166-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 222
               

               
Conread position:
               
824-1170
               

               
Cow position:
               
chr21:13048415-13048063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 182
               

               
Conread position:
               
824-1172
               

               
Cow position:
               
chr21:16188015-16187675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
825-1209
               

               
Cow position:
               
chr21:15445297-15444916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 276
               

               
Conread position:
               
826-1036
               

               
Cow position:
               
chr21:48108082-48107865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 168
               

               
Conread position:
               
827-1130
               

               
Cow position:
               
chr21:39450381-39450071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
827-1205
               

               
Cow position:
               
chr21:5898614-5898237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
827-1209
               

               
Cow position:
               
chr21:41597601-41597980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 247
               

               
Conread position:
               
827-1212
               

               
Cow position:
               
chr21:35354326-35354705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
349, 89
               

               
Conread position:
               
833-988
               

               
Cow position:
               
chr21:16270525-16270682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
833-1169
               

               
Cow position:
               
chr21:41951504-41951166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
834-1047
               

               
Cow position:
               
chr21:8648024-8648244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 160
               

               
Conread position:
               
834-1208
               

               
Cow position:
               
chr21:25800202-25800567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
834-1209
               

               
Cow position:
               
chr21:3361222-3360846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
835-1084
               

               
Cow position:
               
chr21:34237189-34237432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
835-1209
               

               
Cow position:
               
chr21:27521530-27521171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
837-1064
               

               
Cow position:
               
chr21:13850276-13850040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
838-1209
               

               
Cow position:
               
chr21:35569587-35569195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
839-1047
               

               
Cow position:
               
chr21:13303617-13303827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
839-1062
               

               
Cow position:
               
chr21:17434523-17434295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
839-1083
               

               
Cow position:
               
chr21:18934721-18934964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
839-1134
               

               
Cow position:
               
chr21:16503910-16503615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 239
               

               
Conread position:
               
839-1157
               

               
Cow position:
               
chr21:23192720-23192392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
839-1163
               

               
Cow position:
               
chr21:4080152-4080471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 222
               

               
Conread position:
               
839-1163
               

               
Cow position:
               
chr21:5649704-5650026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 232
               

               
Conread position:
               
839-1173
               

               
Cow position:
               
chr21:24796240-24795895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
839-1186
               

               
Cow position:
               
chr21:25127406-25127750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
839-1192
               

               
Cow position:
               
chr21:34159758-34160103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
839-1193
               

               
Cow position:
               
chr21:39401398-39401743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
839-1205
               

               
Cow position:
               
chr21:17416964-17416601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 152
               

               
Conread position:
               
839-1205
               

               
Cow position:
               
chr21:19258624-19258983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 189
               

               
Conread position:
               
839-1208
               

               
Cow position:
               
chr21:33983012-33982642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 160
               

               
Conread position:
               
839-1208
               

               
Cow position:
               
chr21:38918013-38918366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
15, 173
               

               
Conread position:
               
839-1209
               

               
Cow position:
               
chr21:20160482-20160845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
839-1209
               

               
Cow position:
               
chr21:27341799-27341426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
839-1209
               

               
Cow position:
               
chr21:33350540-33350910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
839-1209
               

               
Cow position:
               
chr21:42414304-42413928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
840-1140
               

               
Cow position:
               
chr21:12961098-12960796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
840-1208
               

               
Cow position:
               
chr21:41620918-41621293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
840-1209
               

               
Cow position:
               
chr21:3585557-3585199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 19
               

               
Conread position:
               
840-1209
               

               
Cow position:
               
chr21:17697060-17696695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
841-1040
               

               
Cow position:
               
chr21:11706951-11706744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
841-1161
               

               
Cow position:
               
chr21:48262931-48263255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
841-1209
               

               
Cow position:
               
chr21:17643170-17642817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
842-1067
               

               
Cow position:
               
chr21:26829440-26829230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
844-1004
               

               
Cow position:
               
chr21:1510875-1511034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
844-1040
               

               
Cow position:
               
chr21:4268677-4268877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
844-1196
               

               
Cow position:
               
chr21:20044968-20044608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
844-1209
               

               
Cow position:
               
chr21:23568011-23568397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
845-1164
               

               
Cow position:
               
chr21:17856349-17856668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
845-1170
               

               
Cow position:
               
chr21:13488325-13488657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
846-978
               

               
Cow position:
               
chr21:8546400-8546268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
846-1047
               

               
Cow position:
               
chr21:34835618-34835426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
846-1058
               

               
Cow position:
               
chr21:36819407-36819193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
846-1060
               

               
Cow position:
               
chr21:47067082-47066877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
846-1070
               

               
Cow position:
               
chr21:42145721-42145944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
846-1073
               

               
Cow position:
               
chr21:42170435-42170671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
846-1102
               

               
Cow position:
               
chr21:10882239-10882506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
846-1106
               

               
Cow position:
               
chr21:42190360-42190104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
846-1107
               

               
Cow position:
               
chr21:912162-911898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 144
               

               
Conread position:
               
846-1115
               

               
Cow position:
               
chr21:31676303-31676576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
846-1137
               

               
Cow position:
               
chr21:11639825-11640119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
846-1139
               

               
Cow position:
               
chr21:45866741-45867033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
846-1144
               

               
Cow position:
               
chr21:30150464-30150159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 219
               

               
Conread position:
               
846-1150
               

               
Cow position:
               
chr21:7067849-7068162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 236
               

               
Conread position:
               
846-1158
               

               
Cow position:
               
chr21:13440044-13440353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
846-1170
               

               
Cow position:
               
chr21:1483294-1483610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
846-1170
               

               
Cow position:
               
chr21:17936175-17936502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 227
               

               
Conread position:
               
846-1170
               

               
Cow position:
               
chr21:18718473-18718802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 227
               

               
Conread position:
               
846-1170
               

               
Cow position:
               
chr21:43236768-43237103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 175
               

               
Conread position:
               
846-1173
               

               
Cow position:
               
chr21:13035244-13034905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 173
               

               
Conread position:
               
846-1174
               

               
Cow position:
               
chr21:13489448-13489781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
36, 267
               

               
Conread position:
               
846-1188
               

               
Cow position:
               
chr21:43357454-43357108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
846-1197
               

               
Cow position:
               
chr21:4998680-4998338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
846-1203
               

               
Cow position:
               
chr21:5238200-5238556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 101
               

               
Conread position:
               
846-1205
               

               
Cow position:
               
chr21:18929502-18929860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
846-1205
               

               
Cow position:
               
chr21:21982611-21982969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
846-1207
               

               
Cow position:
               
chr21:28955327-28955668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr21:7709970-7710329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr21:8549486-8549847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr21:9310848-9311219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr21:13585253-13584893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr21:30849134-30848773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr21:31662265-31662635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
846-1208
               

               
Cow position:
               
chr21:42135819-42135448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:3818021-3818377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:4098680-4099038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:4282063-4281711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:6051311-6051672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:6623948-6624326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
9, 223
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:11645164-11644797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:14464382-14464752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
9, 212
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:15976451-15976801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:21077134-21077478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:23586681-23587050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:23801316-23800959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:25382814-25383195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:27569353-27569004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:29484789-29485147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:34739654-34740013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:44515079-44515441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:45330135-45329781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:46242434-46242072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
846-1209
               

               
Cow position:
               
chr21:46849318-46848959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
847-1209
               

               
Cow position:
               
chr21:40589676-40589313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 146
               

               
Conread position:
               
848-1170
               

               
Cow position:
               
chr21:28027611-28027926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 219
               

               
Conread position:
               
848-1179
               

               
Cow position:
               
chr21:10601561-10601236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
848-1189
               

               
Cow position:
               
chr21:34391162-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
848-1202
               

               
Cow position:
               
chr21:35996979-35997333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
848-1209
               

               
Cow position:
               
chr21:2927395-2927036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
848-1209
               

               
Cow position:
               
chr21:33791560-33791213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
848-1209
               

               
Cow position:
               
chr21:37706599-37706246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
848-1209
               

               
Cow position:
               
chr21:47764304-47763949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
849-979
               

               
Cow position:
               
chr21:9303953-9303822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
849-1017
               

               
Cow position:
               
chr21:9334451-9334282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
849-1022
               

               
Cow position:
               
chr21:37208301-37208125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
849-1052
               

               
Cow position:
               
chr21:13163701-13163903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
849-1077
               

               
Cow position:
               
chr21:5344469-5344696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
849-1110
               

               
Cow position:
               
chr21:29248036-29247788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
6, 102
               

               
Conread position:
               
849-1111
               

               
Cow position:
               
chr21:3047494-3047748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
849-1113
               

               
Cow position:
               
chr21:27743550-27743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
849-1143
               

               
Cow position:
               
chr21:3381273-3380975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 109
               

               
Conread position:
               
849-1145
               

               
Cow position:
               
chr21:32535784-32536082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 127
               

               
Conread position:
               
849-1164
               

               
Cow position:
               
chr21:25536806-25537122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
849-1168
               

               
Cow position:
               
chr21:3498306-3498621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
6, 87
               

               
Conread position:
               
849-1168
               

               
Cow position:
               
chr21:45151815-45151501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
6, 199
               

               
Conread position:
               
849-1170
               

               
Cow position:
               
chr21:8618082-8618394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 219
               

               
Conread position:
               
849-1170
               

               
Cow position:
               
chr21:15545555-15545231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
849-1170
               

               
Cow position:
               
chr21:24094936-24094630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
849-1205
               

               
Cow position:
               
chr21:41579559-41579921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
849-1208
               

               
Cow position:
               
chr21:17455193-17455552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 142
               

               
Conread position:
               
849-1208
               

               
Cow position:
               
chr21:38449644-38449281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 118
               

               
Conread position:
               
849-1208
               

               
Cow position:
               
chr21:45850902-45850539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 140
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr21:3763929-3763574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr21:10118361-10118735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 261
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr21:10263851-10264201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr21:24296956-24296599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
6, 86
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr21:31253343-31253702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 228
               

               
Conread position:
               
849-1209
               

               
Cow position:
               
chr21:42841783-42841428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
849-1210
               

               
Cow position:
               
chr21:13738379-13738723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
849-1210
               

               
Cow position:
               
chr21:18940749-18940410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
850-1003
               

               
Cow position:
               
chr21:28907834-28907683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
850-1009
               

               
Cow position:
               
chr21:46132169-46132007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 138
               

               
Conread position:
               
850-1028
               

               
Cow position:
               
chr21:24797504-24797676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
850-1140
               

               
Cow position:
               
chr21:11114520-11114816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
850-1172
               

               
Cow position:
               
chr21:28512342-28512646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
850-1193
               

               
Cow position:
               
chr21:22860812-22861154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
850-1201
               

               
Cow position:
               
chr21:45330798-45330446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 229
               

               
Conread position:
               
850-1208
               

               
Cow position:
               
chr21:32559545-32559197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr21:17193950-17193580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 268
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr21:17428313-17428664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr21:18942019-18941666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr21:22353420-22353069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
850-1209
               

               
Cow position:
               
chr21:46263986-46264339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
851-1084
               

               
Cow position:
               
chr21:12616950-12617182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
851-1107
               

               
Cow position:
               
chr21:23500010-23499756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
213, 114
               

               
Conread position:
               
851-1208
               

               
Cow position:
               
chr21:23322270-23321910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
851-1209
               

               
Cow position:
               
chr21:48637935-48637589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
851-1210
               

               
Cow position:
               
chr21:18845204-18844839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
852-995
               

               
Cow position:
               
chr21:20549097-20548955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
852-1056
               

               
Cow position:
               
chr21:39075897-39075691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 164
               

               
Conread position:
               
852-1067
               

               
Cow position:
               
chr21:21968126-21968345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
852-1191
               

               
Cow position:
               
chr21:15610966-15611291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
853-1003
               

               
Cow position:
               
chr21:13256617-13256769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
853-1007
               

               
Cow position:
               
chr21:28029210-28029369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 140
               

               
Conread position:
               
853-1021
               

               
Cow position:
               
chr21:28599584-28599759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
853-1026
               

               
Cow position:
               
chr21:42465642-42465820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
853-1040
               

               
Cow position:
               
chr21:7716978-7716783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
853-1041
               

               
Cow position:
               
chr21:13395369-13395554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
853-1047
               

               
Cow position:
               
chr21:40065502-40065306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
853-1054
               

               
Cow position:
               
chr21:363468-363666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
853-1056
               

               
Cow position:
               
chr21:31159068-31159281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
853-1068
               

               
Cow position:
               
chr21:31277634-31277849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
853-1082
               

               
Cow position:
               
chr21:9278185-9278423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 230
               

               
Conread position:
               
853-1083
               

               
Cow position:
               
chr21:28944551-28944323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
853-1092
               

               
Cow position:
               
chr21:18935574-18935811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
853-1101
               

               
Cow position:
               
chr21:9710891-9710644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
853-1105
               

               
Cow position:
               
chr21:17302563-17302313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
853-1107
               

               
Cow position:
               
chr21:21480366-21480116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
853-1114
               

               
Cow position:
               
chr21:43300844-43300580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 230
               

               
Conread position:
               
853-1124
               

               
Cow position:
               
chr21:1464041-1464314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
22, 228
               

               
Conread position:
               
853-1137
               

               
Cow position:
               
chr21:6102456-6102164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 146
               

               
Conread position:
               
853-1151
               

               
Cow position:
               
chr21:24765097-24765394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
853-1163
               

               
Cow position:
               
chr21:47730206-47729898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
853-1179
               

               
Cow position:
               
chr21:4795035-4795360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
853-1184
               

               
Cow position:
               
chr21:10514620-10514951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
853-1186
               

               
Cow position:
               
chr21:22856029-22856364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
853-1191
               

               
Cow position:
               
chr21:1591364-1591705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
853-1193
               

               
Cow position:
               
chr21:35061901-35062235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 162
               

               
Conread position:
               
853-1204
               

               
Cow position:
               
chr21:18850406-18850059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
853-1205
               

               
Cow position:
               
chr21:18828496-18828138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
853-1205
               

               
Cow position:
               
chr21:34653897-34654238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
853-1206
               

               
Cow position:
               
chr21:40133968-40134322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
853-1207
               

               
Cow position:
               
chr21:14452043-14452401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
853-1207
               

               
Cow position:
               
chr21:28429262-28429611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
853-1207
               

               
Cow position:
               
chr21:37479769-37480132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 139
               

               
Conread position:
               
853-1207
               

               
Cow position:
               
chr21:47465308-47464952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr21:1058890-1059243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 240
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr21:12801931-12801579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr21:13365154-13365510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr21:19083787-19083421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 214
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr21:19952725-19952375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr21:28626054-28626405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
853-1208
               

               
Cow position:
               
chr21:32237110-32237447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 111
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:33534-33888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:4276781-4276435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:5426759-5427106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:13128278-13127930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:18780157-18779807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:34565400-34565046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:36795415-36795772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
853-1209
               

               
Cow position:
               
chr21:45355649-45356002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
854-1130
               

               
Cow position:
               
chr21:18932306-18932577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
854-1134
               

               
Cow position:
               
chr21:28443565-28443276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
854-1160
               

               
Cow position:
               
chr21:3813669-3813370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 171
               

               
Conread position:
               
854-1205
               

               
Cow position:
               
chr21:24598473-24598823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 137
               

               
Conread position:
               
854-1205
               

               
Cow position:
               
chr21:46973313-46972985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
855-1056
               

               
Cow position:
               
chr21:48251215-48251010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 138
               

               
Conread position:
               
855-1131
               

               
Cow position:
               
chr21:19977146-19977426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
855-1207
               

               
Cow position:
               
chr21:9990329-9990677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
856-1192
               

               
Cow position:
               
chr21:23785847-23786183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
856-1209
               

               
Cow position:
               
chr21:28190844-28191201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
857-1013
               

               
Cow position:
               
chr21:35897300-35897456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
857-1083
               

               
Cow position:
               
chr21:37361653-37361433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
857-1107
               

               
Cow position:
               
chr21:2785960-2785708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
857-1170
               

               
Cow position:
               
chr21:39664572-39664268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
19, 141
               

               
Conread position:
               
857-1172
               

               
Cow position:
               
chr21:46143760-46144091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
857-1186
               

               
Cow position:
               
chr21:46912361-46912691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
857-1189
               

               
Cow position:
               
chr21:30607271-30606937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
857-1190
               

               
Cow position:
               
chr21:18842421-18842087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
857-1209
               

               
Cow position:
               
chr21:27863702-27863345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
857-1209
               

               
Cow position:
               
chr21:29002345-29001988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
857-1209
               

               
Cow position:
               
chr21:45473941-45473589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
857-1210
               

               
Cow position:
               
chr21:641401-641757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
857-1210
               

               
Cow position:
               
chr21:45915887-45915548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
858-1003
               

               
Cow position:
               
chr21:37845930-37845779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
858-1106
               

               
Cow position:
               
chr21:5137673-5137420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 193
               

               
Conread position:
               
860-1061
               

               
Cow position:
               
chr21:45375436-45375644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
860-1082
               

               
Cow position:
               
chr21:42023944-42024165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
860-1148
               

               
Cow position:
               
chr21:43240678-43240974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 199
               

               
Conread position:
               
860-1164
               

               
Cow position:
               
chr21:5636901-5636596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr21:2420324-2420632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
860-1173
               

               
Cow position:
               
chr21:30231883-30231561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 200
               

               
Conread position:
               
860-1178
               

               
Cow position:
               
chr21:44114307-44113993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
860-1201
               

               
Cow position:
               
chr21:33727641-33727298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
860-1209
               

               
Cow position:
               
chr21:802474-802148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
860-1209
               

               
Cow position:
               
chr21:15911220-15911569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
860-1209
               

               
Cow position:
               
chr21:17183741-17184086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
861-1140
               

               
Cow position:
               
chr21:34053366-34053092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
861-1191
               

               
Cow position:
               
chr21:24887830-24888149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
25, 131
               

               
Conread position:
               
861-1207
               

               
Cow position:
               
chr21:29979935-29979604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
862-1209
               

               
Cow position:
               
chr21:7582087-7581736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
862-1209
               

               
Cow position:
               
chr21:8235722-8235393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
863-1102
               

               
Cow position:
               
chr21:9998897-9998655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
863-1107
               

               
Cow position:
               
chr21:49662294-49662053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
863-1192
               

               
Cow position:
               
chr21:4723302-4723632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
863-1196
               

               
Cow position:
               
chr21:19363641-19363304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
863-1205
               

               
Cow position:
               
chr21:18790733-18790401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
863-1209
               

               
Cow position:
               
chr21:33562838-33563172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
863-1209
               

               
Cow position:
               
chr21:37345279-37344932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 213
               

               
Conread position:
               
864-1186
               

               
Cow position:
               
chr21:41455126-41454792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
865-1209
               

               
Cow position:
               
chr21:32339912-32339571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
865-1209
               

               
Cow position:
               
chr21:44565875-44565553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
866-1167
               

               
Cow position:
               
chr21:47495829-47495526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 201
               

               
Conread position:
               
866-1190
               

               
Cow position:
               
chr21:13754628-13754936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
866-1209
               

               
Cow position:
               
chr21:26244758-26245083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
867-1170
               

               
Cow position:
               
chr21:22194283-22193967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
867-1170
               

               
Cow position:
               
chr21:41198583-41198269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 272
               

               
Conread position:
               
867-1209
               

               
Cow position:
               
chr21:23535544-23535878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
868-1146
               

               
Cow position:
               
chr21:36756443-36756706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
868-1206
               

               
Cow position:
               
chr21:29214320-29213994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
868-1207
               

               
Cow position:
               
chr21:47861023-47861356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 185
               

               
Conread position:
               
868-1208
               

               
Cow position:
               
chr21:27146163-27145825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 200
               

               
Conread position:
               
868-1209
               

               
Cow position:
               
chr21:26648177-26647847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
869-1151
               

               
Cow position:
               
chr21:19937103-19936809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
869-1170
               

               
Cow position:
               
chr21:4905142-4904837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 216
               

               
Conread position:
               
870-1152
               

               
Cow position:
               
chr21:17174977-17175255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
874-1057
               

               
Cow position:
               
chr21:6765715-6765898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
874-1208
               

               
Cow position:
               
chr21:9028455-9028783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 188
               

               
Conread position:
               
874-1209
               

               
Cow position:
               
chr21:10000915-10001244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
874-1209
               

               
Cow position:
               
chr21:18065089-18064749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
874-1209
               

               
Cow position:
               
chr21:21169660-21169327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
874-1209
               

               
Cow position:
               
chr21:28244311-28244639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 59
               

               
Conread position:
               
875-1035
               

               
Cow position:
               
chr21:13763458-13763617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
875-1207
               

               
Cow position:
               
chr21:10114493-10114168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
875-1209
               

               
Cow position:
               
chr21:28923952-28924278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
876-1168
               

               
Cow position:
               
chr21:32454738-32455032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
877-1019
               

               
Cow position:
               
chr21:43631365-43631219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
877-1170
               

               
Cow position:
               
chr21:6910045-6909748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
878-1106
               

               
Cow position:
               
chr21:28617429-28617658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
878-1107
               

               
Cow position:
               
chr21:36793731-36793963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
878-1197
               

               
Cow position:
               
chr21:13714002-13713679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
878-1205
               

               
Cow position:
               
chr21:712773-713108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
878-1205
               

               
Cow position:
               
chr21:17709665-17709985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
878-1209
               

               
Cow position:
               
chr21:15584572-15584250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
878-1209
               

               
Cow position:
               
chr21:27624551-27624867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
878-1209
               

               
Cow position:
               
chr21:28211035-28211360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
878-1210
               

               
Cow position:
               
chr21:937879-938187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
297, 21
               

               
Conread position:
               
879-1142
               

               
Cow position:
               
chr21:44148-44407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
880-1206
               

               
Cow position:
               
chr21:41590716-41590399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
881-1131
               

               
Cow position:
               
chr21:4585523-4585270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
881-1170
               

               
Cow position:
               
chr21:13840164-13840456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
881-1208
               

               
Cow position:
               
chr21:17722866-17723181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
884-1209
               

               
Cow position:
               
chr21:45921213-45920890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
885-1021
               

               
Cow position:
               
chr21:14125892-14126030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
885-1059
               

               
Cow position:
               
chr21:10608608-10608432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
885-1209
               

               
Cow position:
               
chr21:9477005-9477331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 195
               

               
Conread position:
               
885-1209
               

               
Cow position:
               
chr21:24642365-24642681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
885-1211
               

               
Cow position:
               
chr21:20260474-20260148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
886-1163
               

               
Cow position:
               
chr21:11456962-11456686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
886-1205
               

               
Cow position:
               
chr21:28989460-28989778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
886-1205
               

               
Cow position:
               
chr21:48176674-48176985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
886-1209
               

               
Cow position:
               
chr21:10633793-10633472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 225
               

               
Conread position:
               
886-1209
               

               
Cow position:
               
chr21:18800681-18800365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
223, 101
               

               
Conread position:
               
887-1187
               

               
Cow position:
               
chr21:46607735-46607443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
887-1209
               

               
Cow position:
               
chr21:10823402-10823728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 192
               

               
Conread position:
               
888-1137
               

               
Cow position:
               
chr21:10261131-10261378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
889-1137
               

               
Cow position:
               
chr21:21769975-21770224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 186
               

               
Conread position:
               
891-1151
               

               
Cow position:
               
chr21:18041990-18041736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
892-1056
               

               
Cow position:
               
chr21:14515701-14515868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
892-1145
               

               
Cow position:
               
chr21:45439396-45439131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
46, 229
               

               
Conread position:
               
892-1170
               

               
Cow position:
               
chr21:44962648-44962927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
892-1209
               

               
Cow position:
               
chr21:10005032-10004717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
893-1047
               

               
Cow position:
               
chr21:32138792-32138946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 130
               

               
Conread position:
               
893-1186
               

               
Cow position:
               
chr21:19673669-19673952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
184, 60
               

               
Conread position:
               
893-1209
               

               
Cow position:
               
chr21:957521-957839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
894-1210
               

               
Cow position:
               
chr21:7825320-7825019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
228, 50
               

               
Conread position:
               
895-1209
               

               
Cow position:
               
chr21:42007603-42007293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
896-1170
               

               
Cow position:
               
chr21:23311090-23310811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
896-1209
               

               
Cow position:
               
chr21:13089610-13089305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
897-1170
               

               
Cow position:
               
chr21:11027499-11027225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 168
               

               
Conread position:
               
897-1208
               

               
Cow position:
               
chr21:9301067-9301390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
897-1208
               

               
Cow position:
               
chr21:29978903-29978592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
898-1187
               

               
Cow position:
               
chr21:11250725-11251016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 180
               

               
Conread position:
               
898-1209
               

               
Cow position:
               
chr21:48234299-48233996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
210, 77
               

               
Conread position:
               
899-1170
               

               
Cow position:
               
chr21:2495313-2495040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 161
               

               
Conread position:
               
900-1064
               

               
Cow position:
               
chr21:12640195-12640362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 163
               

               
Conread position:
               
900-1129
               

               
Cow position:
               
chr21:2293854-2294072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
900-1193
               

               
Cow position:
               
chr21:19412157-19411861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 181
               

               
Conread position:
               
900-1209
               

               
Cow position:
               
chr21:11359899-11360195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
900-1209
               

               
Cow position:
               
chr21:12462109-12461797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
900-1209
               

               
Cow position:
               
chr21:33580278-33580588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
902-1082
               

               
Cow position:
               
chr21:31511153-31511328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
902-1201
               

               
Cow position:
               
chr21:20418826-20418521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 214
               

               
Conread position:
               
903-1113
               

               
Cow position:
               
chr21:39809764-39809969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
903-1124
               

               
Cow position:
               
chr21:34736895-34737114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
903-1201
               

               
Cow position:
               
chr21:18805893-18805598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
903-1203
               

               
Cow position:
               
chr21:17875331-17875030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 178
               

               
Conread position:
               
903-1209
               

               
Cow position:
               
chr21:12723021-12723320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
903-1209
               

               
Cow position:
               
chr21:20152812-20153122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 213
               

               
Conread position:
               
907-1209
               

               
Cow position:
               
chr21:10538394-10538086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
908-1209
               

               
Cow position:
               
chr21:34151450-34151750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 205
               

               
Conread position:
               
909-1209
               

               
Cow position:
               
chr21:16152300-16152610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
910-1210
               

               
Cow position:
               
chr21:27810276-27810557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
912-1208
               

               
Cow position:
               
chr21:13717985-13717697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
912-1209
               

               
Cow position:
               
chr21:46912-47209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
912-1209
               

               
Cow position:
               
chr21:12301630-12301342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
913-1055
               

               
Cow position:
               
chr21:949794-949659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
913-1204
               

               
Cow position:
               
chr21:20192777-20193059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
916-1183
               

               
Cow position:
               
chr21:18414927-18415195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 220
               

               
Conread position:
               
916-1206
               

               
Cow position:
               
chr21:36789671-36789962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
916-1209
               

               
Cow position:
               
chr21:30222219-30222514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
918-1170
               

               
Cow position:
               
chr21:42096944-42097205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
918-1209
               

               
Cow position:
               
chr21:8451774-8452074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
919-1102
               

               
Cow position:
               
chr21:16481566-16481380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
919-1134
               

               
Cow position:
               
chr21:13519071-13519286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
919-1173
               

               
Cow position:
               
chr21:7340131-7340385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
194, 38
               

               
Conread position:
               
919-1173
               

               
Cow position:
               
chr21:18818396-18818142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
919-1186
               

               
Cow position:
               
chr21:18155693-18155420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 198
               

               
Conread position:
               
919-1190
               

               
Cow position:
               
chr21:2260473-2260216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
920-1178
               

               
Cow position:
               
chr21:27668893-27669152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
920-1204
               

               
Cow position:
               
chr21:22121405-22121667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
921-1107
               

               
Cow position:
               
chr21:4568168-4568353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
921-1201
               

               
Cow position:
               
chr21:46552217-46551941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
921-1205
               

               
Cow position:
               
chr21:40168752-40168462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
8, 196
               

               
Conread position:
               
923-1209
               

               
Cow position:
               
chr21:2657704-2657978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
923-1209
               

               
Cow position:
               
chr21:25629027-25628743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
925-1113
               

               
Cow position:
               
chr21:36279895-36280078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
926-1207
               

               
Cow position:
               
chr21:21077490-21077767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
927-1133
               

               
Cow position:
               
chr21:34722901-34722695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
927-1169
               

               
Cow position:
               
chr21:37349883-37350123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
145, 129
               

               
Conread position:
               
928-1070
               

               
Cow position:
               
chr21:46469859-46470001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
928-1209
               

               
Cow position:
               
chr21:23980292-23980013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
929-1111
               

               
Cow position:
               
chr21:9980073-9979899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
930-1204
               

               
Cow position:
               
chr21:10673023-10673284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
930-1209
               

               
Cow position:
               
chr21:8206664-8206939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
934-1209
               

               
Cow position:
               
chr21:42022186-42022444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
937-1170
               

               
Cow position:
               
chr21:9698188-9697950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 177
               

               
Conread position:
               
937-1190
               

               
Cow position:
               
chr21:32904256-32904005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
937-1201
               

               
Cow position:
               
chr21:10561685-10561422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
938-1170
               

               
Cow position:
               
chr21:37790102-37789869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
939-1098
               

               
Cow position:
               
chr21:21143802-21143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
939-1209
               

               
Cow position:
               
chr21:3400933-3400663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
940-1163
               

               
Cow position:
               
chr21:24343363-24343144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
940-1205
               

               
Cow position:
               
chr21:30250288-30250039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
940-1208
               

               
Cow position:
               
chr21:12916524-12916254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 145
               

               
Conread position:
               
940-1209
               

               
Cow position:
               
chr21:16914677-16914945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
168, 110
               

               
Conread position:
               
941-1136
               

               
Cow position:
               
chr21:5985415-5985222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
941-1163
               

               
Cow position:
               
chr21:38664541-38664762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
941-1178
               

               
Cow position:
               
chr21:6017519-6017764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 175
               

               
Conread position:
               
941-1208
               

               
Cow position:
               
chr21:10816925-10817198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
122, 175
               

               
Conread position:
               
941-1209
               

               
Cow position:
               
chr21:17008884-17009149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
942-1211
               

               
Cow position:
               
chr21:22210340-22210075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
944-1125
               

               
Cow position:
               
chr21:29224956-29224775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
944-1147
               

               
Cow position:
               
chr21:8527571-8527377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
944-1151
               

               
Cow position:
               
chr21:10508931-10508728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
142, 107
               

               
Conread position:
               
944-1208
               

               
Cow position:
               
chr21:17560023-17559756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
160, 43
               

               
Conread position:
               
944-1208
               

               
Cow position:
               
chr21:21686324-21686582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
944-1209
               

               
Cow position:
               
chr21:22465103-22465359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
947-1208
               

               
Cow position:
               
chr21:30835271-30835531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 165
               

               
Conread position:
               
947-1209
               

               
Cow position:
               
chr21:6997847-6998116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
947-1209
               

               
Cow position:
               
chr21:31090511-31090266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
948-1151
               

               
Cow position:
               
chr21:20589227-20589434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
949-1142
               

               
Cow position:
               
chr21:30236906-30236722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
949-1209
               

               
Cow position:
               
chr21:28237803-28237539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
950-1145
               

               
Cow position:
               
chr21:30218271-30218087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
950-1186
               

               
Cow position:
               
chr21:17364564-17364334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
950-1202
               

               
Cow position:
               
chr21:9940282-9940028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
952-1162
               

               
Cow position:
               
chr21:9036209-9036423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
953-1154
               

               
Cow position:
               
chr21:13495455-13495657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 157
               

               
Conread position:
               
956-1184
               

               
Cow position:
               
chr21:41107844-41107623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
957-1158
               

               
Cow position:
               
chr21:37014484-37014288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
957-1170
               

               
Cow position:
               
chr21:10858735-10858937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
957-1209
               

               
Cow position:
               
chr21:30256350-30256105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
958-1189
               

               
Cow position:
               
chr21:40432368-40432594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
959-1170
               

               
Cow position:
               
chr21:46140962-46141178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
959-1209
               

               
Cow position:
               
chr21:7823298-7823533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
959-1209
               

               
Cow position:
               
chr21:47714086-47713841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
959-1210
               

               
Cow position:
               
chr21:10410139-10410392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
962-1164
               

               
Cow position:
               
chr21:33360110-33359919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
962-1189
               

               
Cow position:
               
chr21:17929917-17929688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
962-1208
               

               
Cow position:
               
chr21:36909858-36910099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
962-1209
               

               
Cow position:
               
chr21:16569825-16570068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
962-1210
               

               
Cow position:
               
chr21:44214048-44214296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
964-1209
               

               
Cow position:
               
chr21:33414159-33413919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
965-1207
               

               
Cow position:
               
chr21:4280745-4280508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
966-1209
               

               
Cow position:
               
chr21:1511219-1511458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
966-1209
               

               
Cow position:
               
chr21:15544290-15544060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
966-1209
               

               
Cow position:
               
chr21:40266049-40266290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
967-1209
               

               
Cow position:
               
chr21:45262883-45262641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
968-1167
               

               
Cow position:
               
chr21:19702654-19702864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 107
               

               
Conread position:
               
969-1209
               

               
Cow position:
               
chr21:6758277-6758512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
970-1147
               

               
Cow position:
               
chr21:19210646-19210821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
970-1208
               

               
Cow position:
               
chr21:10979009-10978782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
970-1208
               

               
Cow position:
               
chr21:37640487-37640729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
972-1200
               

               
Cow position:
               
chr21:35899776-35900001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
973-1137
               

               
Cow position:
               
chr21:22720162-22720325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
973-1170
               

               
Cow position:
               
chr21:11198214-11198018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 101
               

               
Conread position:
               
973-1207
               

               
Cow position:
               
chr21:2810227-2809995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
973-1209
               

               
Cow position:
               
chr21:7394316-7394544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
973-1209
               

               
Cow position:
               
chr21:41140783-41140549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
89, 103
               

               
Conread position:
               
974-1188
               

               
Cow position:
               
chr21:47715608-47715395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
975-1188
               

               
Cow position:
               
chr21:297689-297902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
975-1192
               

               
Cow position:
               
chr21:23397908-23397695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
976-1205
               

               
Cow position:
               
chr21:8426379-8426611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
976-1208
               

               
Cow position:
               
chr21:10292428-10292659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
976-1209
               

               
Cow position:
               
chr21:11779592-11779373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
977-1209
               

               
Cow position:
               
chr21:8349267-8349497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
978-1170
               

               
Cow position:
               
chr21:9707333-9707141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 102
               

               
Conread position:
               
979-1173
               

               
Cow position:
               
chr21:18060016-18059828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
981-1168
               

               
Cow position:
               
chr21:37384428-37384611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
982-1208
               

               
Cow position:
               
chr21:43259166-43259386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
982-1209
               

               
Cow position:
               
chr21:44861171-44860950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
983-1102
               

               
Cow position:
               
chr21:14228626-14228504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
983-1209
               

               
Cow position:
               
chr21:38268095-38267893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
984-1107
               

               
Cow position:
               
chr21:7391331-7391209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
984-1208
               

               
Cow position:
               
chr21:5464692-5464916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
984-1209
               

               
Cow position:
               
chr21:977199-976972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
984-1209
               

               
Cow position:
               
chr21:17890248-17890471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
984-1209
               

               
Cow position:
               
chr21:47363793-47363565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
987-1166
               

               
Cow position:
               
chr21:9302479-9302301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
987-1177
               

               
Cow position:
               
chr21:13656681-13656499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
987-1207
               

               
Cow position:
               
chr21:28919576-28919361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
92, 122
               

               
Conread position:
               
987-1208
               

               
Cow position:
               
chr21:48527356-48527575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
987-1209
               

               
Cow position:
               
chr21:868977-868755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
987-1209
               

               
Cow position:
               
chr21:7377981-7377757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
987-1209
               

               
Cow position:
               
chr21:22014133-22014359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
987-1209
               

               
Cow position:
               
chr21:36910688-36910910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
152, 74
               

               
Conread position:
               
990-1193
               

               
Cow position:
               
chr21:19060136-19059940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
990-1207
               

               
Cow position:
               
chr21:41522456-41522248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
992-1209
               

               
Cow position:
               
chr21:19513818-19514022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
992-1209
               

               
Cow position:
               
chr21:21907476-21907265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
993-1209
               

               
Cow position:
               
chr21:29014959-29014742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
995-1208
               

               
Cow position:
               
chr21:13842444-13842656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 113
               

               
Conread position:
               
996-1203
               

               
Cow position:
               
chr21:36696133-36695927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 77
               

               
Conread position:
               
1000-1209
               

               
Cow position:
               
chr21:471638-471843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1001-1177
               

               
Cow position:
               
chr21:10883962-10883785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
1002-1209
               

               
Cow position:
               
chr21:17982939-17983146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
1002-1209
               

               
Cow position:
               
chr21:29014597-29014390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
1003-1208
               

               
Cow position:
               
chr21:42209667-42209461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
73, 108
               

               
Conread position:
               
1005-1209
               

               
Cow position:
               
chr21:734562-734758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1005-1209
               

               
Cow position:
               
chr21:13395564-13395767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
1011-1208
               

               
Cow position:
               
chr21:26753468-26753659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
1013-1209
               

               
Cow position:
               
chr21:38720226-38720417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1014-1205
               

               
Cow position:
               
chr21:40192326-40192139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1014-1209
               

               
Cow position:
               
chr21:28030263-28030457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
1016-1205
               

               
Cow position:
               
chr21:30157833-30157640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
1016-1209
               

               
Cow position:
               
chr21:71563-71755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
1016-1209
               

               
Cow position:
               
chr21:37235362-37235554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
1020-1209
               

               
Cow position:
               
chr21:31159384-31159566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
1024-1170
               

               
Cow position:
               
chr21:44724380-44724238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
1024-1209
               

               
Cow position:
               
chr21:13036915-13036737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1028-1192
               

               
Cow position:
               
chr21:29405226-29405069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1028-1209
               

               
Cow position:
               
chr21:6387989-6388168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
1029-1209
               

               
Cow position:
               
chr21:31279244-31279425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
1030-1209
               

               
Cow position:
               
chr21:7768425-7768607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
1032-1202
               

               
Cow position:
               
chr21:20183064-20183233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
1033-1207
               

               
Cow position:
               
chr21:46132569-46132741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1037-1209
               

               
Cow position:
               
chr21:12739077-12739247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
1038-1209
               

               
Cow position:
               
chr21:13588761-13588928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1039-1209
               

               
Cow position:
               
chr21:36508241-36508403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1039-1210
               

               
Cow position:
               
chr21:8546018-8545853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1040-1209
               

               
Cow position:
               
chr21:24797663-24797823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
1040-1209
               

               
Cow position:
               
chr21:29658281-29658445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
161, 11
               

               
Conread position:
               
1044-1206
               

               
Cow position:
               
chr21:23460145-23460299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1052-1203
               

               
Cow position:
               
chr21:40769303-40769456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
1052-1209
               

               
Cow position:
               
chr21:19360164-19360007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
1053-1210
               

               
Cow position:
               
chr21:17695647-17695496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
1058-1208
               

               
Cow position:
               
chr21:41287775-41287625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
1069-1207
               

               
Cow position:
               
chr21:12207773-12207635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
1074-1208
               

               
Cow position:
               
chr21:13163894-13164027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1075-1209
               

               
Cow position:
               
chr21:41610203-41610339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
1076-1209
               

               
Cow position:
               
chr21:40291709-40291579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr21:17062962-17063090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr21:22939805-22939939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr21:30119732-30119863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1077-1209
               

               
Cow position:
               
chr21:40475538-40475667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1077-1210
               

               
Cow position:
               
chr21:44592171-44592039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1077-1212
               

               
Cow position:
               
chr21:8231639-8231506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1081-1209
               

               
Cow position:
               
chr21:7221298-7221171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
1081-1212
               

               
Cow position:
               
chr21:46470228-46470355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1084-1209
               

               
Cow position:
               
chr21:35647783-35647659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1085-1209
               

               
Cow position:
               
chr21:6736142-6736020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
1090-1208
               

               
Cow position:
               
chr21:41040995-41041112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1090-1209
               

               
Cow position:
               
chr21:5342043-5341925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1095-1209
               

               
Cow position:
               
chr21:265680-265792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1109-1208
               

               
Cow position:
               
chr21:25159238-25159339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1112-1209
               

               
Cow position:
               
chr21:37361170-37361073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.