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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8010K01.5
        

               
Conread position:
               
257-632
               

               
Cow position:
               
chr28:16364329-16363955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
258-457
               

               
Cow position:
               
chr28:32300722-32300519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
260-373
               

               
Cow position:
               
chr28:3493980-3493869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-386
               

               
Cow position:
               
chr28:13290532-13290403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
260-393
               

               
Cow position:
               
chr28:30389803-30389672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-394
               

               
Cow position:
               
chr28:13536577-13536709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-397
               

               
Cow position:
               
chr28:746816-746951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-425
               

               
Cow position:
               
chr28:3000965-3000805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-433
               

               
Cow position:
               
chr28:10886230-10886059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-433
               

               
Cow position:
               
chr28:23802300-23802471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-453
               

               
Cow position:
               
chr28:12980907-12980715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
260-457
               

               
Cow position:
               
chr28:25128337-25128142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-481
               

               
Cow position:
               
chr28:14742446-14742665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-484
               

               
Cow position:
               
chr28:4058373-4058592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-492
               

               
Cow position:
               
chr28:23254141-23253925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
260-516
               

               
Cow position:
               
chr28:8911574-8911319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
260-523
               

               
Cow position:
               
chr28:10870990-10871252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-537
               

               
Cow position:
               
chr28:4957598-4957329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
260-556
               

               
Cow position:
               
chr28:20760277-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 17
               

               
Conread position:
               
260-557
               

               
Cow position:
               
chr28:10868510-10868214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-557
               

               
Cow position:
               
chr28:10934513-10934217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-557
               

               
Cow position:
               
chr28:23312670-23312374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-558
               

               
Cow position:
               
chr28:12651249-12651545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-566
               

               
Cow position:
               
chr28:14997710-14998010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 17
               

               
Conread position:
               
260-566
               

               
Cow position:
               
chr28:26781729-26782034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-568
               

               
Cow position:
               
chr28:18096623-18096927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-568
               

               
Cow position:
               
chr28:25411519-25411825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
254, 14
               

               
Conread position:
               
260-574
               

               
Cow position:
               
chr28:24606165-24605853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-587
               

               
Cow position:
               
chr28:10642370-10642048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
260-587
               

               
Cow position:
               
chr28:13473953-13474270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
260-587
               

               
Cow position:
               
chr28:23839858-23840171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
306, 17
               

               
Conread position:
               
260-588
               

               
Cow position:
               
chr28:21868097-21868425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
260-589
               

               
Cow position:
               
chr28:28098376-28098708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
215, 17
               

               
Conread position:
               
260-595
               

               
Cow position:
               
chr28:5311449-5311118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-597
               

               
Cow position:
               
chr28:5637952-5638292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
229, 17
               

               
Conread position:
               
260-597
               

               
Cow position:
               
chr28:7794513-7794172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 17
               

               
Conread position:
               
260-597
               

               
Cow position:
               
chr28:10512790-10513123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
245, 17
               

               
Conread position:
               
260-597
               

               
Cow position:
               
chr28:33689410-33689749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
249, 14
               

               
Conread position:
               
260-601
               

               
Cow position:
               
chr28:5771013-5771347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
260-620
               

               
Cow position:
               
chr28:24592411-24592771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-625
               

               
Cow position:
               
chr28:11426890-11426538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
265, 17
               

               
Conread position:
               
260-625
               

               
Cow position:
               
chr28:16084973-16085328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 17
               

               
Conread position:
               
260-625
               

               
Cow position:
               
chr28:22171083-22170706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
260-625
               

               
Cow position:
               
chr28:33163811-33163457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
264, 17
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr28:1199096-1199463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr28:15107679-15107312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr28:22083852-22083485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr28:34379701-34380068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
249, 17
               

               
Conread position:
               
261-400
               

               
Cow position:
               
chr28:6090808-6090944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
261-575
               

               
Cow position:
               
chr28:28163743-28164041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
256, 16
               

               
Conread position:
               
261-586
               

               
Cow position:
               
chr28:661761-662075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
261-628
               

               
Cow position:
               
chr28:10682175-10681815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
264-547
               

               
Cow position:
               
chr28:16346866-16346601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
264-586
               

               
Cow position:
               
chr28:26614545-26614854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
260, 13
               

               
Conread position:
               
265-534
               

               
Cow position:
               
chr28:19564944-19564678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
265-567
               

               
Cow position:
               
chr28:20538502-20538802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
194, 12
               

               
Conread position:
               
267-390
               

               
Cow position:
               
chr28:28934055-28933934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-391
               

               
Cow position:
               
chr28:790039-789917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-393
               

               
Cow position:
               
chr28:19300949-19301073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr28:6472882-6473007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr28:18278728-18278597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr28:22735982-22736107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
267-395
               

               
Cow position:
               
chr28:7005936-7006062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-401
               

               
Cow position:
               
chr28:5145065-5144934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
267-401
               

               
Cow position:
               
chr28:24674373-24674506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
267-429
               

               
Cow position:
               
chr28:31847393-31847232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
267-433
               

               
Cow position:
               
chr28:6484621-6484457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-433
               

               
Cow position:
               
chr28:12342715-12342550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
267-433
               

               
Cow position:
               
chr28:24694232-24694396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-434
               

               
Cow position:
               
chr28:5747798-5747633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-452
               

               
Cow position:
               
chr28:26466336-26466518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
267-452
               

               
Cow position:
               
chr28:33031885-33032067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
267-454
               

               
Cow position:
               
chr28:15916620-15916435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-457
               

               
Cow position:
               
chr28:9851289-9851471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
267-457
               

               
Cow position:
               
chr28:10463953-10463765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-457
               

               
Cow position:
               
chr28:23309428-23309240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
137, 10
               

               
Conread position:
               
267-457
               

               
Cow position:
               
chr28:27503945-27503760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr28:2645617-2645806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr28:3891886-3892075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr28:6651073-6650883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr28:7443712-7443902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr28:15408788-15408598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr28:30250034-30250224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:2512718-2512511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:3882042-3881835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:14433983-14434190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:15616458-15616665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:16182256-16182462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:22582689-22582896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:23685946-23686153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:25693904-25693698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr28:27754863-27755070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
267-480
               

               
Cow position:
               
chr28:18516237-18516025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
267-487
               

               
Cow position:
               
chr28:7946103-7945885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-507
               

               
Cow position:
               
chr28:10295844-10296080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
267-513
               

               
Cow position:
               
chr28:23111595-23111831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-516
               

               
Cow position:
               
chr28:29044277-29044523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-519
               

               
Cow position:
               
chr28:34655992-34656244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
267-523
               

               
Cow position:
               
chr28:2615916-2615661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-523
               

               
Cow position:
               
chr28:7970831-7970576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-528
               

               
Cow position:
               
chr28:10455877-10455617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
214, 10
               

               
Conread position:
               
267-529
               

               
Cow position:
               
chr28:30532090-30531829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-537
               

               
Cow position:
               
chr28:5941395-5941664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-542
               

               
Cow position:
               
chr28:15712915-15713185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
267-542
               

               
Cow position:
               
chr28:32785316-32785047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-550
               

               
Cow position:
               
chr28:31142311-31142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
256, 10
               

               
Conread position:
               
267-555
               

               
Cow position:
               
chr28:7268280-7268001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
251, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:481802-481513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:882859-882570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:3627983-3628272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:5071507-5071218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:9710246-9709957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:10193127-10192838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:12701775-12702064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:13323095-13322806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:15285891-15285603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:16598055-16598346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:21491518-21491229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
210, 7
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:22308314-22308586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
244, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:22577108-22577397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:24993395-24993684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:25556310-25556028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:27938728-27939017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-557
               

               
Cow position:
               
chr28:29222379-29222095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-559
               

               
Cow position:
               
chr28:25805334-25805613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:1508788-1509085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:2089149-2089447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:9848674-9848378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:12457809-12458107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
158, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:18790665-18790960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:19515739-19515442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:23616055-23616354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
219, 7
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:27684053-27683755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:28798640-28798345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
267-566
               

               
Cow position:
               
chr28:32305345-32305046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
267-568
               

               
Cow position:
               
chr28:6319255-6318956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
223, 10
               

               
Conread position:
               
267-568
               

               
Cow position:
               
chr28:12117332-12117032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
267-568
               

               
Cow position:
               
chr28:25683301-25683002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-568
               

               
Cow position:
               
chr28:34731639-34731938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
267-574
               

               
Cow position:
               
chr28:1811088-1810786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-575
               

               
Cow position:
               
chr28:4070618-4070924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
267-581
               

               
Cow position:
               
chr28:7864984-7865288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
254, 10
               

               
Conread position:
               
267-584
               

               
Cow position:
               
chr28:8347375-8347698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
267-586
               

               
Cow position:
               
chr28:22332203-22332504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
254, 11
               

               
Conread position:
               
267-587
               

               
Cow position:
               
chr28:2814845-2814538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
298, 10
               

               
Conread position:
               
267-587
               

               
Cow position:
               
chr28:5684357-5684675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
267-587
               

               
Cow position:
               
chr28:19186131-19186453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-588
               

               
Cow position:
               
chr28:5826601-5826922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
250, 11
               

               
Conread position:
               
267-588
               

               
Cow position:
               
chr28:22254284-22253973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-588
               

               
Cow position:
               
chr28:24671926-24672235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-589
               

               
Cow position:
               
chr28:1261913-1262237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-589
               

               
Cow position:
               
chr28:5335606-5335283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
253, 10
               

               
Conread position:
               
267-589
               

               
Cow position:
               
chr28:7336886-7337209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-589
               

               
Cow position:
               
chr28:15605431-15605755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-592
               

               
Cow position:
               
chr28:11451822-11451489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
267-592
               

               
Cow position:
               
chr28:14150891-14151207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 10
               

               
Conread position:
               
267-597
               

               
Cow position:
               
chr28:1943389-1943054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
267-597
               

               
Cow position:
               
chr28:7888177-7887845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-597
               

               
Cow position:
               
chr28:11281049-11280716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-597
               

               
Cow position:
               
chr28:14610412-14610745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-597
               

               
Cow position:
               
chr28:21893869-21893540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-597
               

               
Cow position:
               
chr28:28356878-28356545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-601
               

               
Cow position:
               
chr28:15375169-15374841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 10
               

               
Conread position:
               
267-606
               

               
Cow position:
               
chr28:21844609-21844946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
254, 10
               

               
Conread position:
               
267-610
               

               
Cow position:
               
chr28:1957271-1957614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-610
               

               
Cow position:
               
chr28:7830472-7830815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-610
               

               
Cow position:
               
chr28:14113333-14113677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-610
               

               
Cow position:
               
chr28:23823417-23823073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-610
               

               
Cow position:
               
chr28:25104743-25105086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
267-623
               

               
Cow position:
               
chr28:8787203-8787542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
251, 10
               

               
Conread position:
               
267-623
               

               
Cow position:
               
chr28:11585554-11585201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
192, 10
               

               
Conread position:
               
267-623
               

               
Cow position:
               
chr28:11752492-11752138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 10
               

               
Conread position:
               
267-625
               

               
Cow position:
               
chr28:11527601-11527255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
254, 10
               

               
Conread position:
               
267-625
               

               
Cow position:
               
chr28:20124442-20124787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
254, 10
               

               
Conread position:
               
267-627
               

               
Cow position:
               
chr28:10744858-10745219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
267-628
               

               
Cow position:
               
chr28:16109606-16109945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
252, 10
               

               
Conread position:
               
267-629
               

               
Cow position:
               
chr28:30327431-30327080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:800629-800269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:1575597-1575237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:6534889-6534529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
194, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:7197199-7196840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:7715906-7715546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
214, 12
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:15998612-15998254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:17687753-17687393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:22318997-22318638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
263, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:27478675-27479033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
216, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:29683145-29683505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr28:30561117-30561477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
242, 10
               

               
Conread position:
               
276-457
               

               
Cow position:
               
chr28:13356922-13356745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
276-507
               

               
Cow position:
               
chr28:31223934-31223706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
276-568
               

               
Cow position:
               
chr28:6775973-6775681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
233, 284
               

               
Conread position:
               
276-625
               

               
Cow position:
               
chr28:9285703-9285367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
245, 17
               

               
Conread position:
               
277-378
               

               
Cow position:
               
chr28:19552465-19552364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-394
               

               
Cow position:
               
chr28:25829311-25829428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-418
               

               
Cow position:
               
chr28:2842236-2842375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
277-424
               

               
Cow position:
               
chr28:10589368-10589221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-430
               

               
Cow position:
               
chr28:8935387-8935536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
277-431
               

               
Cow position:
               
chr28:8972633-8972787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-431
               

               
Cow position:
               
chr28:32174316-32174468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
277-431
               

               
Cow position:
               
chr28:33466482-33466636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-433
               

               
Cow position:
               
chr28:11547418-11547262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-433
               

               
Cow position:
               
chr28:22329976-22330127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
277-433
               

               
Cow position:
               
chr28:32824020-32824180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
277-434
               

               
Cow position:
               
chr28:5110695-5110538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-434
               

               
Cow position:
               
chr28:32362428-32362584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
277-448
               

               
Cow position:
               
chr28:8290396-8290569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
277-452
               

               
Cow position:
               
chr28:1428170-1428343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
277-452
               

               
Cow position:
               
chr28:22164635-22164806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
277-452
               

               
Cow position:
               
chr28:26983990-26983812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr28:3011759-3011581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr28:5792363-5792543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr28:10577956-10577776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr28:12593296-12593474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr28:12964239-12964417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
277-459
               

               
Cow position:
               
chr28:34009677-34009861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 140
               

               
Conread position:
               
277-464
               

               
Cow position:
               
chr28:606762-606945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
277-464
               

               
Cow position:
               
chr28:1316129-1315944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr28:16925551-16925359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr28:28779238-28779424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
277-470
               

               
Cow position:
               
chr28:3097717-3097909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr28:10867571-10867768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
277-476
               

               
Cow position:
               
chr28:3646370-3646564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
277-476
               

               
Cow position:
               
chr28:33234748-33234947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-479
               

               
Cow position:
               
chr28:16003727-16003929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-479
               

               
Cow position:
               
chr28:26452944-26452745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
277-479
               

               
Cow position:
               
chr28:28724133-28724335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-481
               

               
Cow position:
               
chr28:7485517-7485315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
277-481
               

               
Cow position:
               
chr28:9647365-9647165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
277-492
               

               
Cow position:
               
chr28:10977525-10977738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
140, 192
               

               
Conread position:
               
277-492
               

               
Cow position:
               
chr28:28766248-28766034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr28:16246604-16246381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
197, 82
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr28:16365140-16364910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 128
               

               
Conread position:
               
277-511
               

               
Cow position:
               
chr28:4046808-4047034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
277-512
               

               
Cow position:
               
chr28:11759876-11759647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
151, 158
               

               
Conread position:
               
277-513
               

               
Cow position:
               
chr28:757598-757371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
203, 35
               

               
Conread position:
               
277-513
               

               
Cow position:
               
chr28:30967128-30967358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 116
               

               
Conread position:
               
277-515
               

               
Cow position:
               
chr28:24215548-24215788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 101
               

               
Conread position:
               
277-516
               

               
Cow position:
               
chr28:28340958-28341195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
167, 98
               

               
Conread position:
               
277-519
               

               
Cow position:
               
chr28:11690544-11690297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
277-523
               

               
Cow position:
               
chr28:10473869-10474114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
242, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr28:29806536-29806290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
206, 79
               

               
Conread position:
               
277-529
               

               
Cow position:
               
chr28:22279523-22279285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
277-536
               

               
Cow position:
               
chr28:9267761-9268021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
232, 247
               

               
Conread position:
               
277-536
               

               
Cow position:
               
chr28:23212325-23212065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
277-536
               

               
Cow position:
               
chr28:34243623-34243883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
277-541
               

               
Cow position:
               
chr28:3479926-3480193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 185
               

               
Conread position:
               
277-542
               

               
Cow position:
               
chr28:2949203-2949463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
232, 184
               

               
Conread position:
               
277-542
               

               
Cow position:
               
chr28:6047707-6047973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
232, 249
               

               
Conread position:
               
277-542
               

               
Cow position:
               
chr28:17663033-17662767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
242, 249
               

               
Conread position:
               
277-542
               

               
Cow position:
               
chr28:29824101-29824367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
232, 249
               

               
Conread position:
               
277-543
               

               
Cow position:
               
chr28:6971678-6971422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
244, 109
               

               
Conread position:
               
277-543
               

               
Cow position:
               
chr28:16388312-16388554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
241, 37
               

               
Conread position:
               
277-544
               

               
Cow position:
               
chr28:8372132-8372398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
205, 77
               

               
Conread position:
               
277-549
               

               
Cow position:
               
chr28:26151686-26151958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
204, 53
               

               
Conread position:
               
277-550
               

               
Cow position:
               
chr28:29199388-29199656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
277-553
               

               
Cow position:
               
chr28:25399551-25399813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 61
               

               
Conread position:
               
277-556
               

               
Cow position:
               
chr28:10900482-10900755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
147, 8
               

               
Conread position:
               
277-557
               

               
Cow position:
               
chr28:332364-332645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
277-557
               

               
Cow position:
               
chr28:5805180-5805454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 123
               

               
Conread position:
               
277-557
               

               
Cow position:
               
chr28:11787045-11786775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
244, 79
               

               
Conread position:
               
277-557
               

               
Cow position:
               
chr28:22208866-22208585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
239, 249
               

               
Conread position:
               
277-557
               

               
Cow position:
               
chr28:28213904-28214184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
230, 246
               

               
Conread position:
               
277-560
               

               
Cow position:
               
chr28:16441051-16441323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
242, 71
               

               
Conread position:
               
277-560
               

               
Cow position:
               
chr28:22132587-22132865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
224, 184
               

               
Conread position:
               
277-563
               

               
Cow position:
               
chr28:13889605-13889892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
232, 247
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:2280007-2279720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 184
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:4215031-4215321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
158, 65
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:5212252-5212542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
232, 249
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:5361354-5361064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
232, 249
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:7209209-7208925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
232, 120
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:7745997-7746294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
74, 256
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:12430268-12430553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:17392481-17392771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
230, 249
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:17738417-17738128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 25
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:21104183-21103890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
239, 69
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:22322926-22323214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 182
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:23793658-23793361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:26419085-26418796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 77
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:26727751-26727471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
232, 138
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:30098792-30099082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
232, 250
               

               
Conread position:
               
277-566
               

               
Cow position:
               
chr28:31648738-31649020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
230, 59
               

               
Conread position:
               
277-567
               

               
Cow position:
               
chr28:4139017-4138727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 79
               

               
Conread position:
               
277-568
               

               
Cow position:
               
chr28:2422625-2422915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
200, 217
               

               
Conread position:
               
277-568
               

               
Cow position:
               
chr28:14675168-14675457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
231, 65
               

               
Conread position:
               
277-570
               

               
Cow position:
               
chr28:22304519-22304798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
193, 6
               

               
Conread position:
               
277-576
               

               
Cow position:
               
chr28:8682190-8681883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
210, 169
               

               
Conread position:
               
277-579
               

               
Cow position:
               
chr28:26922709-26922405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
277-580
               

               
Cow position:
               
chr28:3745864-3746166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
236, 76
               

               
Conread position:
               
277-580
               

               
Cow position:
               
chr28:4587757-4588061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 113
               

               
Conread position:
               
277-580
               

               
Cow position:
               
chr28:7685015-7684720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
246, 38
               

               
Conread position:
               
277-580
               

               
Cow position:
               
chr28:13267442-13267749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
277-580
               

               
Cow position:
               
chr28:19222484-19222188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 109
               

               
Conread position:
               
277-584
               

               
Cow position:
               
chr28:23530525-23530836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
119, 151
               

               
Conread position:
               
277-585
               

               
Cow position:
               
chr28:15272598-15272294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
210, 56
               

               
Conread position:
               
277-586
               

               
Cow position:
               
chr28:12049052-12048736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
277-588
               

               
Cow position:
               
chr28:20312935-20313246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
277-588
               

               
Cow position:
               
chr28:21363419-21363716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
291, 135
               

               
Conread position:
               
277-588
               

               
Cow position:
               
chr28:21598592-21598283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 108
               

               
Conread position:
               
277-588
               

               
Cow position:
               
chr28:25701199-25700902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
277-589
               

               
Cow position:
               
chr28:17369965-17370276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
232, 56
               

               
Conread position:
               
277-593
               

               
Cow position:
               
chr28:30303526-30303219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
240, 46
               

               
Conread position:
               
277-594
               

               
Cow position:
               
chr28:5904397-5904710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
246, 117
               

               
Conread position:
               
277-594
               

               
Cow position:
               
chr28:16406747-16407071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
277-594
               

               
Cow position:
               
chr28:34878308-34877993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
233, 22
               

               
Conread position:
               
277-595
               

               
Cow position:
               
chr28:16686695-16687003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
307, 81
               

               
Conread position:
               
277-595
               

               
Cow position:
               
chr28:18354645-18354346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
277-595
               

               
Cow position:
               
chr28:30210039-30209718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
232, 197
               

               
Conread position:
               
277-595
               

               
Cow position:
               
chr28:30293926-30293609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
206, 71
               

               
Conread position:
               
277-595
               

               
Cow position:
               
chr28:34443102-34442778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
203, 35
               

               
Conread position:
               
277-596
               

               
Cow position:
               
chr28:3144226-3143906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 71
               

               
Conread position:
               
277-597
               

               
Cow position:
               
chr28:9182784-9183106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
277-597
               

               
Cow position:
               
chr28:20966746-20966421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
277-602
               

               
Cow position:
               
chr28:12946606-12946932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
277-603
               

               
Cow position:
               
chr28:13693410-13693739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
109, 158
               

               
Conread position:
               
277-605
               

               
Cow position:
               
chr28:10616289-10615972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
277-605
               

               
Cow position:
               
chr28:16215230-16214914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
232, 109
               

               
Conread position:
               
277-606
               

               
Cow position:
               
chr28:34082354-34082029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
234, 34
               

               
Conread position:
               
277-616
               

               
Cow position:
               
chr28:20934483-20934147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
232, 29
               

               
Conread position:
               
277-618
               

               
Cow position:
               
chr28:9426681-9426353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
230, 163
               

               
Conread position:
               
277-624
               

               
Cow position:
               
chr28:4022043-4022390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 189
               

               
Conread position:
               
277-625
               

               
Cow position:
               
chr28:3024248-3023910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
244, 71
               

               
Conread position:
               
277-625
               

               
Cow position:
               
chr28:7503498-7503848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
277-625
               

               
Cow position:
               
chr28:18590934-18591274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
277-625
               

               
Cow position:
               
chr28:21354885-21355234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 169
               

               
Conread position:
               
277-625
               

               
Cow position:
               
chr28:21380542-21380884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 105
               

               
Conread position:
               
277-626
               

               
Cow position:
               
chr28:10606950-10606621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
226, 8
               

               
Conread position:
               
277-628
               

               
Cow position:
               
chr28:3474633-3474967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
246, 144
               

               
Conread position:
               
277-628
               

               
Cow position:
               
chr28:10879435-10879775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
277-630
               

               
Cow position:
               
chr28:5270545-5270899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
132, 109
               

               
Conread position:
               
277-630
               

               
Cow position:
               
chr28:25727042-25727385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
244, 110
               

               
Conread position:
               
278-368
               

               
Cow position:
               
chr28:4057360-4057450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-390
               

               
Cow position:
               
chr28:9099318-9099430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-410
               

               
Cow position:
               
chr28:1883202-1883073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
278-433
               

               
Cow position:
               
chr28:25476474-25476630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
278-433
               

               
Cow position:
               
chr28:29942814-29942970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
278-440
               

               
Cow position:
               
chr28:2132313-2132153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
278-451
               

               
Cow position:
               
chr28:19194423-19194597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
278-454
               

               
Cow position:
               
chr28:22344368-22344542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
278-456
               

               
Cow position:
               
chr28:5825758-5825933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
278-457
               

               
Cow position:
               
chr28:28185464-28185640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 90
               

               
Conread position:
               
278-476
               

               
Cow position:
               
chr28:23114621-23114423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
278-510
               

               
Cow position:
               
chr28:1884888-1885121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
278-512
               

               
Cow position:
               
chr28:11924158-11923921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
278-515
               

               
Cow position:
               
chr28:5054364-5054127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
146, 28
               

               
Conread position:
               
278-522
               

               
Cow position:
               
chr28:7882466-7882712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
167, 70
               

               
Conread position:
               
278-530
               

               
Cow position:
               
chr28:7372589-7372342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 131
               

               
Conread position:
               
278-537
               

               
Cow position:
               
chr28:17130943-17130687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
231, 55
               

               
Conread position:
               
278-557
               

               
Cow position:
               
chr28:16919499-16919223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
278-558
               

               
Cow position:
               
chr28:4582900-4583181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
216, 64
               

               
Conread position:
               
278-558
               

               
Cow position:
               
chr28:29035734-29035454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
216, 189
               

               
Conread position:
               
278-558
               

               
Cow position:
               
chr28:29658828-29658556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
231, 165
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr28:21129461-21129187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 135
               

               
Conread position:
               
278-566
               

               
Cow position:
               
chr28:3187627-3187338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
231, 248
               

               
Conread position:
               
278-566
               

               
Cow position:
               
chr28:11505354-11505068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
211, 183
               

               
Conread position:
               
278-566
               

               
Cow position:
               
chr28:13371514-13371227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
278-566
               

               
Cow position:
               
chr28:14657359-14657648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
278-566
               

               
Cow position:
               
chr28:24603842-24604122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
278-566
               

               
Cow position:
               
chr28:25806259-25806518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
243, 69
               

               
Conread position:
               
278-567
               

               
Cow position:
               
chr28:5931010-5931299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
278-568
               

               
Cow position:
               
chr28:10563311-10563598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
278-574
               

               
Cow position:
               
chr28:11931724-11931424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
231, 0
               

               
Conread position:
               
278-580
               

               
Cow position:
               
chr28:3914372-3914674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 108
               

               
Conread position:
               
278-587
               

               
Cow position:
               
chr28:3256463-3256767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
235, 105
               

               
Conread position:
               
278-587
               

               
Cow position:
               
chr28:18139794-18139487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
82, 177
               

               
Conread position:
               
278-588
               

               
Cow position:
               
chr28:6577321-6577612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
278-588
               

               
Cow position:
               
chr28:17287890-17288189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
169, 60
               

               
Conread position:
               
278-592
               

               
Cow position:
               
chr28:25762694-25763007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
209, 67
               

               
Conread position:
               
278-597
               

               
Cow position:
               
chr28:19295700-19295379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
278-625
               

               
Cow position:
               
chr28:7549400-7549055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 108
               

               
Conread position:
               
278-625
               

               
Cow position:
               
chr28:25056632-25056969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 183
               

               
Conread position:
               
278-630
               

               
Cow position:
               
chr28:3750981-3751330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 108
               

               
Conread position:
               
278-630
               

               
Cow position:
               
chr28:21767234-21766881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
231, 248
               

               
Conread position:
               
279-511
               

               
Cow position:
               
chr28:17762321-17762553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
279-561
               

               
Cow position:
               
chr28:1213886-1213603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
230, 247
               

               
Conread position:
               
279-586
               

               
Cow position:
               
chr28:6960159-6960470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
230, 245
               

               
Conread position:
               
280-426
               

               
Cow position:
               
chr28:7608276-7608134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
280-452
               

               
Cow position:
               
chr28:7697332-7697167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
280-459
               

               
Cow position:
               
chr28:19340674-19340502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
280-542
               

               
Cow position:
               
chr28:11733461-11733198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
229, 244
               

               
Conread position:
               
280-556
               

               
Cow position:
               
chr28:17359066-17358796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
239, 19
               

               
Conread position:
               
280-580
               

               
Cow position:
               
chr28:11687361-11687066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
241, 79
               

               
Conread position:
               
280-580
               

               
Cow position:
               
chr28:23675812-23676101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
246, 62
               

               
Conread position:
               
280-589
               

               
Cow position:
               
chr28:4282828-4282518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 202
               

               
Conread position:
               
280-589
               

               
Cow position:
               
chr28:4310908-4311220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
229, 152
               

               
Conread position:
               
280-589
               

               
Cow position:
               
chr28:19080207-19079873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 195
               

               
Conread position:
               
280-620
               

               
Cow position:
               
chr28:18717461-18717119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
280-622
               

               
Cow position:
               
chr28:8022447-8022101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
285, 154
               

               
Conread position:
               
280-625
               

               
Cow position:
               
chr28:15600928-15601280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
203, 106
               

               
Conread position:
               
281-558
               

               
Cow position:
               
chr28:5203870-5204130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
240, 46
               

               
Conread position:
               
281-560
               

               
Cow position:
               
chr28:16211432-16211151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 242
               

               
Conread position:
               
281-566
               

               
Cow position:
               
chr28:786577-786863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
228, 245
               

               
Conread position:
               
281-566
               

               
Cow position:
               
chr28:17638199-17637921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
242, 61
               

               
Conread position:
               
281-580
               

               
Cow position:
               
chr28:7698312-7698017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
242, 52
               

               
Conread position:
               
281-588
               

               
Cow position:
               
chr28:14933627-14933937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 105
               

               
Conread position:
               
282-452
               

               
Cow position:
               
chr28:3740518-3740688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
282-511
               

               
Cow position:
               
chr28:33697779-33698013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
282-527
               

               
Cow position:
               
chr28:5371242-5371000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
282-556
               

               
Cow position:
               
chr28:4188194-4188465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
282-566
               

               
Cow position:
               
chr28:33640485-33640773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
212, 33
               

               
Conread position:
               
282-580
               

               
Cow position:
               
chr28:7590517-7590218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
282-584
               

               
Cow position:
               
chr28:6486264-6486561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
276, 72
               

               
Conread position:
               
283-566
               

               
Cow position:
               
chr28:23480594-23480312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
188, 71
               

               
Conread position:
               
283-589
               

               
Cow position:
               
chr28:19222925-19222625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
225, 7
               

               
Conread position:
               
283-589
               

               
Cow position:
               
chr28:25070772-25071095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
284-433
               

               
Cow position:
               
chr28:10980808-10980957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
284-528
               

               
Cow position:
               
chr28:29392670-29392910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
285-557
               

               
Cow position:
               
chr28:25893161-25892888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
196, 176
               

               
Conread position:
               
285-610
               

               
Cow position:
               
chr28:7936561-7936888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
224, 312
               

               
Conread position:
               
286-513
               

               
Cow position:
               
chr28:25334689-25334917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
289-454
               

               
Cow position:
               
chr28:3427188-3427026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
289-468
               

               
Cow position:
               
chr28:4536144-4536322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
289-522
               

               
Cow position:
               
chr28:22500813-22500588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
289-568
               

               
Cow position:
               
chr28:34626707-34626985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
220, 235
               

               
Conread position:
               
289-630
               

               
Cow position:
               
chr28:34598248-34598590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
220, 237
               

               
Conread position:
               
290-459
               

               
Cow position:
               
chr28:23281543-23281376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
290-557
               

               
Cow position:
               
chr28:22372001-22371740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
290-625
               

               
Cow position:
               
chr28:4880590-4880261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
237, 177
               

               
Conread position:
               
291-451
               

               
Cow position:
               
chr28:27994993-27995151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
291-456
               

               
Cow position:
               
chr28:34561033-34561198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
291-558
               

               
Cow position:
               
chr28:12619240-12619506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
291-580
               

               
Cow position:
               
chr28:26269006-26269292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
291-587
               

               
Cow position:
               
chr28:10534252-10533964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
274, 38
               

               
Conread position:
               
292-536
               

               
Cow position:
               
chr28:7013912-7013669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
211, 110
               

               
Conread position:
               
293-400
               

               
Cow position:
               
chr28:25768150-25768257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-588
               

               
Cow position:
               
chr28:7512913-7512616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
293-630
               

               
Cow position:
               
chr28:23489812-23489477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
216, 299
               

               
Conread position:
               
294-604
               

               
Cow position:
               
chr28:11827164-11827476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
294-622
               

               
Cow position:
               
chr28:7751622-7751298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 24
               

               
Conread position:
               
295-568
               

               
Cow position:
               
chr28:9276822-9277095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 265
               

               
Conread position:
               
296-442
               

               
Cow position:
               
chr28:3202819-3202963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
296-588
               

               
Cow position:
               
chr28:4308218-4307933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
213, 105
               

               
Conread position:
               
297-557
               

               
Cow position:
               
chr28:2819442-2819701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
197, 5
               

               
Conread position:
               
299-454
               

               
Cow position:
               
chr28:22358230-22358383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
299-459
               

               
Cow position:
               
chr28:12260170-12260010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
299-459
               

               
Cow position:
               
chr28:30284095-30283935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
299-580
               

               
Cow position:
               
chr28:16401580-16401861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
299-585
               

               
Cow position:
               
chr28:10888346-10888632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
222, 257
               

               
Conread position:
               
299-588
               

               
Cow position:
               
chr28:2124122-2124399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
213, 95
               

               
Conread position:
               
299-628
               

               
Cow position:
               
chr28:12758824-12758494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
214, 87
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr28:7059967-7060297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
182, 162
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr28:26684798-26685126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
300-588
               

               
Cow position:
               
chr28:15007846-15008132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
306-542
               

               
Cow position:
               
chr28:28792163-28792392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
203, 155
               

               
Conread position:
               
308-543
               

               
Cow position:
               
chr28:6059775-6059542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
192, 33
               

               
Conread position:
               
309-449
               

               
Cow position:
               
chr28:2800939-2801075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
309-522
               

               
Cow position:
               
chr28:16879572-16879373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
309-558
               

               
Cow position:
               
chr28:34008260-34008004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 221
               

               
Conread position:
               
309-568
               

               
Cow position:
               
chr28:8111300-8111557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
200, 18
               

               
Conread position:
               
309-624
               

               
Cow position:
               
chr28:10669267-10669580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
184, 152
               

               
Conread position:
               
312-630
               

               
Cow position:
               
chr28:8066479-8066796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
197, 285
               

               
Conread position:
               
313-628
               

               
Cow position:
               
chr28:5768890-5769204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 159
               

               
Conread position:
               
314-528
               

               
Cow position:
               
chr28:16250346-16250134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 130
               

               
Conread position:
               
317-588
               

               
Cow position:
               
chr28:23008027-23007763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 143
               

               
Conread position:
               
318-607
               

               
Cow position:
               
chr28:31987306-31987601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
319-557
               

               
Cow position:
               
chr28:14234680-14234910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
202, 38
               

               
Conread position:
               
319-567
               

               
Cow position:
               
chr28:6546687-6546435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 208
               

               
Conread position:
               
320-597
               

               
Cow position:
               
chr28:16350336-16350076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
321-595
               

               
Cow position:
               
chr28:22351196-22351466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
322-623
               

               
Cow position:
               
chr28:9390659-9390362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
244, 145
               

               
Conread position:
               
323-580
               

               
Cow position:
               
chr28:7228677-7228422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
323-630
               

               
Cow position:
               
chr28:34852488-34852796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
170, 138
               

               
Conread position:
               
327-588
               

               
Cow position:
               
chr28:31110294-31110033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 69
               

               
Conread position:
               
329-492
               

               
Cow position:
               
chr28:5837825-5837985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
331-492
               

               
Cow position:
               
chr28:8103674-8103516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
331-594
               

               
Cow position:
               
chr28:26743337-26743601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
184, 63
               

               
Conread position:
               
336-588
               

               
Cow position:
               
chr28:26784748-26784494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
339-556
               

               
Cow position:
               
chr28:8963246-8963464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
155, 122
               

               
Conread position:
               
339-587
               

               
Cow position:
               
chr28:5129005-5128762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
342-602
               

               
Cow position:
               
chr28:15263998-15263731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 23
               

               
Conread position:
               
343-566
               

               
Cow position:
               
chr28:8382061-8382284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
166, 8
               

               
Conread position:
               
345-566
               

               
Cow position:
               
chr28:23410596-23410379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
347-566
               

               
Cow position:
               
chr28:34229960-34230177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
174, 138
               

               
Conread position:
               
348-588
               

               
Cow position:
               
chr28:21502131-21502364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 15
               

               
Conread position:
               
353-566
               

               
Cow position:
               
chr28:3408480-3408261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
354-580
               

               
Cow position:
               
chr28:24996851-24996626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
354-584
               

               
Cow position:
               
chr28:16244021-16243792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 107
               

               
Conread position:
               
354-589
               

               
Cow position:
               
chr28:26533280-26533520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
160, 233
               

               
Conread position:
               
354-590
               

               
Cow position:
               
chr28:11380305-11380071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
175, 155
               

               
Conread position:
               
354-628
               

               
Cow position:
               
chr28:16253117-16252850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
167, 33
               

               
Conread position:
               
355-589
               

               
Cow position:
               
chr28:13176940-13176711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
356-581
               

               
Cow position:
               
chr28:10172674-10172450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
212, 153
               

               
Conread position:
               
357-491
               

               
Cow position:
               
chr28:1099901-1099768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
357-566
               

               
Cow position:
               
chr28:19026262-19026066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
164, 86
               

               
Conread position:
               
357-566
               

               
Cow position:
               
chr28:25424562-25424354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
359-557
               

               
Cow position:
               
chr28:22484991-22485185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
150, 46
               

               
Conread position:
               
360-570
               

               
Cow position:
               
chr28:32813255-32813044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
152, 63
               

               
Conread position:
               
361-589
               

               
Cow position:
               
chr28:2862606-2862836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
160, 148
               

               
Conread position:
               
361-597
               

               
Cow position:
               
chr28:5773387-5773615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
207, 27
               

               
Conread position:
               
361-625
               

               
Cow position:
               
chr28:33051765-33052039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 166
               

               
Conread position:
               
363-588
               

               
Cow position:
               
chr28:27218067-27218295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
155, 159
               

               
Conread position:
               
363-626
               

               
Cow position:
               
chr28:25596379-25596635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
150, 95
               

               
Conread position:
               
364-601
               

               
Cow position:
               
chr28:3078930-3078698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 103
               

               
Conread position:
               
364-602
               

               
Cow position:
               
chr28:16386758-16386523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
151, 95
               

               
Conread position:
               
364-613
               

               
Cow position:
               
chr28:8348905-8348652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
149, 116
               

               
Conread position:
               
365-576
               

               
Cow position:
               
chr28:22345768-22345977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
159, 51
               

               
Conread position:
               
366-566
               

               
Cow position:
               
chr28:2905330-2905521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
155, 95
               

               
Conread position:
               
366-588
               

               
Cow position:
               
chr28:8408486-8408705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
367-584
               

               
Cow position:
               
chr28:2898746-2898965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
368-628
               

               
Cow position:
               
chr28:4914350-4914085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 248
               

               
Conread position:
               
374-521
               

               
Cow position:
               
chr28:25498746-25498599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-607
               

               
Cow position:
               
chr28:23775808-23776037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
144, 130
               

               
Conread position:
               
379-620
               

               
Cow position:
               
chr28:5658317-5658553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
189, 14
               

               
Conread position:
               
382-608
               

               
Cow position:
               
chr28:11884757-11884529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 64
               
Show alignments to all cow chromosomes.