Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8010K01.5 | 
| Conread position: | 251-569 | 
| Cow position: | chr3:11509-11827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 258, 309 | 
| Conread position: | 256-516 | 
| Cow position: | chr3:28879335-28879597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 257-507 | 
| Cow position: | chr3:38018086-38017843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 131, 20 | 
| Conread position: | 258-394 | 
| Cow position: | chr3:82398239-82398371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 258-457 | 
| Cow position: | chr3:20225771-20225968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 258-567 | 
| Cow position: | chr3:2483070-2483363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 253, 17 | 
| Conread position: | 258-589 | 
| Cow position: | chr3:80581292-80581607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 263, 19 | 
| Conread position: | 258-607 | 
| Cow position: | chr3:41367368-41367024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 19 | 
| Conread position: | 259-542 | 
| Cow position: | chr3:22511304-22511021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 128, 18 | 
| Conread position: | 260-373 | 
| Cow position: | chr3:73459840-73459951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-375 | 
| Cow position: | chr3:73394491-73394604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-376 | 
| Cow position: | chr3:69419301-69419185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 6, 19 | 
| Conread position: | 260-391 | 
| Cow position: | chr3:36082197-36082068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 93, 17 | 
| Conread position: | 260-394 | 
| Cow position: | chr3:10244934-10245066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-394 | 
| Cow position: | chr3:34041181-34041313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-394 | 
| Cow position: | chr3:67388796-67388928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-396 | 
| Cow position: | chr3:14627619-14627485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-398 | 
| Cow position: | chr3:55836299-55836164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 56, 17 | 
| Conread position: | 260-432 | 
| Cow position: | chr3:66136503-66136332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 90, 17 | 
| Conread position: | 260-435 | 
| Cow position: | chr3:22196667-22196494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-436 | 
| Cow position: | chr3:4319372-4319207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-450 | 
| Cow position: | chr3:32221505-32221689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-452 | 
| Cow position: | chr3:4160987-4160797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 144, 14 | 
| Conread position: | 260-457 | 
| Cow position: | chr3:77892326-77892131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-459 | 
| Cow position: | chr3:23598253-23598056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-459 | 
| Cow position: | chr3:27515873-27516069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 260-459 | 
| Cow position: | chr3:58026899-58026702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-472 | 
| Cow position: | chr3:59117988-59117779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 260-473 | 
| Cow position: | chr3:14280461-14280671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-475 | 
| Cow position: | chr3:21594067-21594280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 260-476 | 
| Cow position: | chr3:17331385-17331599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-476 | 
| Cow position: | chr3:40049671-40049885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-478 | 
| Cow position: | chr3:43524954-43524738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-478 | 
| Cow position: | chr3:76155334-76155542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 260-478 | 
| Cow position: | chr3:84598436-84598220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 260-481 | 
| Cow position: | chr3:42670941-42671156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 260-490 | 
| Cow position: | chr3:3884409-3884180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 199, 17 | 
| Conread position: | 260-511 | 
| Cow position: | chr3:64294295-64294544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 73, 15 | 
| Conread position: | 260-514 | 
| Cow position: | chr3:55107491-55107240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 134, 17 | 
| Conread position: | 260-514 | 
| Cow position: | chr3:67044476-67044232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 260-517 | 
| Cow position: | chr3:54346606-54346353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 242, 17 | 
| Conread position: | 260-519 | 
| Cow position: | chr3:28597247-28596997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 260-532 | 
| Cow position: | chr3:23992851-23993128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 141, 17 | 
| Conread position: | 260-536 | 
| Cow position: | chr3:65273781-65273509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-542 | 
| Cow position: | chr3:40568408-40568129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-542 | 
| Cow position: | chr3:45986146-45986427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 260-546 | 
| Cow position: | chr3:31771313-31771595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 18, 128 | 
| Conread position: | 260-550 | 
| Cow position: | chr3:7338160-7337873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 130, 17 | 
| Conread position: | 260-555 | 
| Cow position: | chr3:14717431-14717716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 264, 17 | 
| Conread position: | 260-555 | 
| Cow position: | chr3:36657156-36656863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 33, 17 | 
| Conread position: | 260-557 | 
| Cow position: | chr3:14213168-14213464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-557 | 
| Cow position: | chr3:19827677-19827384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-558 | 
| Cow position: | chr3:8557164-8556876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 264, 17 | 
| Conread position: | 260-558 | 
| Cow position: | chr3:70566121-70565829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 260-563 | 
| Cow position: | chr3:226110-225821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-566 | 
| Cow position: | chr3:16004367-16004073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 188, 17 | 
| Conread position: | 260-566 | 
| Cow position: | chr3:21070625-21070325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-566 | 
| Cow position: | chr3:31047325-31047034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 263, 17 | 
| Conread position: | 260-566 | 
| Cow position: | chr3:36670806-36670504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 67, 18 | 
| Conread position: | 260-567 | 
| Cow position: | chr3:42423718-42423415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 54, 17 | 
| Conread position: | 260-568 | 
| Cow position: | chr3:13361232-13361538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-568 | 
| Cow position: | chr3:18111367-18111061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-570 | 
| Cow position: | chr3:48530255-48530569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 264, 17 | 
| Conread position: | 260-575 | 
| Cow position: | chr3:73762851-73762538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 47, 17 | 
| Conread position: | 260-580 | 
| Cow position: | chr3:82460789-82461112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 72, 17 | 
| Conread position: | 260-586 | 
| Cow position: | chr3:31500972-31501291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 261, 19 | 
| Conread position: | 260-586 | 
| Cow position: | chr3:50768292-50768623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 73, 17 | 
| Conread position: | 260-587 | 
| Cow position: | chr3:45098025-45098354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-597 | 
| Cow position: | chr3:79668896-79669236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-598 | 
| Cow position: | chr3:20796078-20796418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-603 | 
| Cow position: | chr3:29887807-29887467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 261, 17 | 
| Conread position: | 260-605 | 
| Cow position: | chr3:5475319-5475667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-608 | 
| Cow position: | chr3:24852970-24852628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 306, 17 | 
| Conread position: | 260-610 | 
| Cow position: | chr3:18874898-18874551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 254, 17 | 
| Conread position: | 260-610 | 
| Cow position: | chr3:72174230-72173880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-623 | 
| Cow position: | chr3:29807080-29807438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 258, 14 | 
| Conread position: | 260-623 | 
| Cow position: | chr3:59798871-59799220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 261, 17 | 
| Conread position: | 260-625 | 
| Cow position: | chr3:53047024-53046685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 246, 17 | 
| Conread position: | 260-625 | 
| Cow position: | chr3:75479635-75479977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 258, 17 | 
| Conread position: | 260-625 | 
| Cow position: | chr3:77496435-77496803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 261, 17 | 
| Conread position: | 260-627 | 
| Cow position: | chr3:49327564-49327921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 258, 17 | 
| Conread position: | 260-630 | 
| Cow position: | chr3:39921163-39920796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 223, 14 | 
| Conread position: | 260-630 | 
| Cow position: | chr3:46261155-46261522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 249, 17 | 
| Conread position: | 260-631 | 
| Cow position: | chr3:77226939-77227305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 255, 17 | 
| Conread position: | 261-370 | 
| Cow position: | chr3:524747-524853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 261-435 | 
| Cow position: | chr3:61174927-61175101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 10, 18 | 
| Conread position: | 261-589 | 
| Cow position: | chr3:49218690-49218371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 17 | 
| Conread position: | 264-566 | 
| Cow position: | chr3:75710934-75711228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 90, 15 | 
| Conread position: | 264-585 | 
| Cow position: | chr3:56697558-56697880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 195, 201 | 
| Conread position: | 265-630 | 
| Cow position: | chr3:19977832-19977470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 244, 12 | 
| Conread position: | 266-557 | 
| Cow position: | chr3:13311209-13310922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 271, 11 | 
| Conread position: | 266-587 | 
| Cow position: | chr3:53588769-53588445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 97, 13 | 
| Conread position: | 267-377 | 
| Cow position: | chr3:48242138-48242030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-385 | 
| Cow position: | chr3:14614021-14614137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-385 | 
| Cow position: | chr3:24344071-24343955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-390 | 
| Cow position: | chr3:34973398-34973277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-391 | 
| Cow position: | chr3:33021266-33021388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-392 | 
| Cow position: | chr3:30322318-30322441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:11123069-11123194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:12932559-12932684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:15089558-15089683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:34151424-34151299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:34819596-34819471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:47077820-47077695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:64749105-64749230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:66887400-66887275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:67196536-67196411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-394 | 
| Cow position: | chr3:69273688-69273813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-395 | 
| Cow position: | chr3:6068398-6068524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-395 | 
| Cow position: | chr3:7245316-7245190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-397 | 
| Cow position: | chr3:38698165-38698293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-398 | 
| Cow position: | chr3:65079296-65079168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-413 | 
| Cow position: | chr3:36874269-36874125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-430 | 
| Cow position: | chr3:49132625-49132470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-433 | 
| Cow position: | chr3:19942675-19942837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 79, 10 | 
| Conread position: | 267-433 | 
| Cow position: | chr3:37646687-37646855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 145, 10 | 
| Conread position: | 267-433 | 
| Cow position: | chr3:75997094-75996930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-436 | 
| Cow position: | chr3:57789269-57789438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 95, 10 | 
| Conread position: | 267-445 | 
| Cow position: | chr3:83845233-83845411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 117, 10 | 
| Conread position: | 267-449 | 
| Cow position: | chr3:50123879-50123707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-451 | 
| Cow position: | chr3:26980980-26981157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-454 | 
| Cow position: | chr3:32485372-32485557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-454 | 
| Cow position: | chr3:64015378-64015193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-454 | 
| Cow position: | chr3:78520838-78521023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:3257391-3257203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:23072158-23072349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 28, 10 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:35299298-35299486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:35488524-35488335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 120, 10 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:37020452-37020265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:42507419-42507231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:55010528-55010345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 168, 10 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:62624009-62623824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:68514925-68514738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:76000166-75999978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-457 | 
| Cow position: | chr3:81374459-81374272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:1760283-1760473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:12027903-12028093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:14144788-14144598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:20388678-20388488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:20804859-20805049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:27674242-27674053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:30989307-30989117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:47758501-47758691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:58912830-58913020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-459 | 
| Cow position: | chr3:65672529-65672721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 267-468 | 
| Cow position: | chr3:29172007-29172206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-470 | 
| Cow position: | chr3:22353768-22353973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 93, 10 | 
| Conread position: | 267-473 | 
| Cow position: | chr3:9806126-9806329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 193, 10 | 
| Conread position: | 267-473 | 
| Cow position: | chr3:36170166-36169961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 120, 7 | 
| Conread position: | 267-475 | 
| Cow position: | chr3:34503346-34503140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-475 | 
| Cow position: | chr3:53787603-53787397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:3553172-3553379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:6262690-6262897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:7155014-7154807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:9435586-9435793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:14438196-14437990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:15417259-15417466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:17263199-17262992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:19881842-19882049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:20476291-20476498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:20843777-20843570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:28764630-28764423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:30301782-30301989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:30328877-30328670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:35433160-35433366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:35805605-35805812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:37150614-37150409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:42277461-42277255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:45749047-45749254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:46349896-46350103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:50941220-50941013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:51869852-51870059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:56298171-56298378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 172, 10 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:58337092-58337299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:60514317-60514110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-476 | 
| Cow position: | chr3:65474220-65474427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-478 | 
| Cow position: | chr3:49768938-49769147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-479 | 
| Cow position: | chr3:5988770-5988566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-479 | 
| Cow position: | chr3:29282546-29282756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-479 | 
| Cow position: | chr3:61200582-61200792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-481 | 
| Cow position: | chr3:11447626-11447833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-487 | 
| Cow position: | chr3:1622893-1623111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 267-487 | 
| Cow position: | chr3:3372393-3372175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-487 | 
| Cow position: | chr3:56335889-56335671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-507 | 
| Cow position: | chr3:18887203-18887443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 10 | 
| Conread position: | 267-507 | 
| Cow position: | chr3:26474781-26475023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 267-512 | 
| Cow position: | chr3:32356543-32356785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-512 | 
| Cow position: | chr3:48811361-48811120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-513 | 
| Cow position: | chr3:51147040-51146798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-513 | 
| Cow position: | chr3:60389269-60389499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-516 | 
| Cow position: | chr3:18179374-18179620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-516 | 
| Cow position: | chr3:59341966-59342214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 11 | 
| Conread position: | 267-516 | 
| Cow position: | chr3:64654427-64654675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-516 | 
| Cow position: | chr3:76865224-76865471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-517 | 
| Cow position: | chr3:49948582-49948830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:1438355-1438610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:18052129-18051874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:30753375-30753630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:35342074-35341819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:43634059-43633804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:49930453-49930198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 217, 10 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:55417543-55417288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-523 | 
| Cow position: | chr3:59748029-59747774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-525 | 
| Cow position: | chr3:47987255-47987516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 100, 10 | 
| Conread position: | 267-525 | 
| Cow position: | chr3:82056484-82056242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 267-527 | 
| Cow position: | chr3:12671071-12670818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 22, 10 | 
| Conread position: | 267-527 | 
| Cow position: | chr3:16619962-16619702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 18, 10 | 
| Conread position: | 267-537 | 
| Cow position: | chr3:73211608-73211877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-537 | 
| Cow position: | chr3:77472208-77471938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 206, 10 | 
| Conread position: | 267-541 | 
| Cow position: | chr3:4864893-4864620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 254, 11 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:13195430-13195704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:13291507-13291782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 121, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:21178464-21178191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 222, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:23286185-23285914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:30815960-30816234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:47720039-47720313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:51520274-51520000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:52011562-52011836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:56976363-56976098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-542 | 
| Cow position: | chr3:62321522-62321239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 51, 10 | 
| Conread position: | 267-543 | 
| Cow position: | chr3:16752623-16752360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 257, 10 | 
| Conread position: | 267-543 | 
| Cow position: | chr3:21302807-21302539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 120, 10 | 
| Conread position: | 267-549 | 
| Cow position: | chr3:6714900-6715180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 254, 10 | 
| Conread position: | 267-555 | 
| Cow position: | chr3:15955168-15955456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 10 | 
| Conread position: | 267-556 | 
| Cow position: | chr3:72603974-72604262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 269, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:470312-470024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:2573320-2573609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:2874878-2874587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 227, 7 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:4289167-4289455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:6058962-6058673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:7767706-7767995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:7959988-7959703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 77, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:10050692-10050982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 142, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:10448678-10448389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:14261225-14261514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:14923442-14923732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 120, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:24557783-24557494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:26892283-26892572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:27687569-27687281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:28933696-28933985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:32411774-32411485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:35043952-35044243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:36374288-36374574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:36861318-36861029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:41018518-41018229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:47233607-47233318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:48043072-48043361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:49286954-49287243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:51242510-51242222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:68631730-68631441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:68716919-68716629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 81, 7 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:69962086-69961806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 35, 10 | 
| Conread position: | 267-557 | 
| Cow position: | chr3:79074961-79074672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 77, 10 | 
| Conread position: | 267-558 | 
| Cow position: | chr3:22723997-22723716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-558 | 
| Cow position: | chr3:40689329-40689044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 215, 7 | 
| Conread position: | 267-558 | 
| Cow position: | chr3:77276780-77276498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 267-558 | 
| Cow position: | chr3:83884307-83884599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 199, 7 | 
| Conread position: | 267-559 | 
| Cow position: | chr3:12797268-12796976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 84, 7 | 
| Conread position: | 267-561 | 
| Cow position: | chr3:53935086-53935380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 31, 10 | 
| Conread position: | 267-563 | 
| Cow position: | chr3:2035922-2036213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-563 | 
| Cow position: | chr3:65325756-65325457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 78, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:5064717-5065013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:5495872-5495578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 113, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:5950803-5950508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:8148038-8147751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:9641172-9641482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 66, 12 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:11385297-11385595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:17709964-17710253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:26973843-26973543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 226, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:34026774-34026480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:45215010-45214723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:54653367-54653069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:59865272-59865569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:65989697-65989996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 51, 10 | 
| Conread position: | 267-566 | 
| Cow position: | chr3:78110737-78111032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 249, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:8240552-8240851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:14889092-14889391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:16226665-16226958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:37894616-37894916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:40194663-40194962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:43463666-43463368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 123, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:46128346-46128047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:49604654-49604356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:65085726-65086024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 216, 10 | 
| Conread position: | 267-568 | 
| Cow position: | chr3:81064217-81064515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-569 | 
| Cow position: | chr3:19234566-19234866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 82, 10 | 
| Conread position: | 267-574 | 
| Cow position: | chr3:11333689-11333385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 216, 10 | 
| Conread position: | 267-574 | 
| Cow position: | chr3:18715860-18715553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-574 | 
| Cow position: | chr3:23203880-23203574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-574 | 
| Cow position: | chr3:49416059-49415752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-584 | 
| Cow position: | chr3:15685286-15684987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 175, 13 | 
| Conread position: | 267-584 | 
| Cow position: | chr3:79902127-79902444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 10 | 
| Conread position: | 267-585 | 
| Cow position: | chr3:66978467-66978775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 298, 12 | 
| Conread position: | 267-587 | 
| Cow position: | chr3:2075573-2075895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-587 | 
| Cow position: | chr3:45293862-45294184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-587 | 
| Cow position: | chr3:53538142-53538462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 88, 10 | 
| Conread position: | 267-587 | 
| Cow position: | chr3:59691528-59691835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 254, 10 | 
| Conread position: | 267-587 | 
| Cow position: | chr3:72675712-72676033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:2506855-2506534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 254, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:14626526-14626216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 254, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:37599792-37599485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 292, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:47284464-47284777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:54959822-54960130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:68586665-68586962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 299, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:69849878-69849564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 298, 10 | 
| Conread position: | 267-588 | 
| Cow position: | chr3:71231030-71231340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 250, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:303014-303337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:1034880-1035204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:4331981-4332309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 27, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:14453451-14453770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:15687897-15687577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 84, 7 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:20129571-20129887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:22490415-22490737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:28434784-28434460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 226, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:28675613-28675933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:36121967-36122291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:41057753-41058076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:45881529-45881846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 37, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:48567041-48566726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 168, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:68509401-68509085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:73001531-73001853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 227, 7 | 
| Conread position: | 267-589 | 
| Cow position: | chr3:74088537-74088227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 10 | 
| Conread position: | 267-594 | 
| Cow position: | chr3:33698349-33698676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 10 | 
| Conread position: | 267-595 | 
| Cow position: | chr3:13275426-13275098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 222, 10 | 
| Conread position: | 267-595 | 
| Cow position: | chr3:34016366-34016696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-595 | 
| Cow position: | chr3:54573146-54572816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:2922422-2922755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:5117054-5117385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:6838824-6839157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:13722059-13721731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 210, 7 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:14680874-14681207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:17100361-17100038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:19959387-19959724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 145, 10 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:26638749-26639080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 230, 10 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:32619219-32618886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 121, 10 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:41206779-41206446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:46683626-46683958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 83, 10 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:52225212-52225545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:70731092-70731425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-597 | 
| Cow position: | chr3:75771342-75771014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 226, 7 | 
| Conread position: | 267-598 | 
| Cow position: | chr3:12712302-12711966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 267-600 | 
| Cow position: | chr3:2833746-2833411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-600 | 
| Cow position: | chr3:6442859-6443194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 247, 11 | 
| Conread position: | 267-600 | 
| Cow position: | chr3:26801877-26802208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-601 | 
| Cow position: | chr3:49975737-49975402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-602 | 
| Cow position: | chr3:49454856-49455192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 104, 10 | 
| Conread position: | 267-606 | 
| Cow position: | chr3:6884938-6885281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-606 | 
| Cow position: | chr3:55733567-55733907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 256, 10 | 
| Conread position: | 267-607 | 
| Cow position: | chr3:46341087-46341424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 278, 10 | 
| Conread position: | 267-607 | 
| Cow position: | chr3:48296335-48296668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 247, 11 | 
| Conread position: | 267-607 | 
| Cow position: | chr3:50922191-50922532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-608 | 
| Cow position: | chr3:12982095-12981758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-608 | 
| Cow position: | chr3:12986561-12986224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-610 | 
| Cow position: | chr3:36013950-36014293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-610 | 
| Cow position: | chr3:51666509-51666852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-610 | 
| Cow position: | chr3:74061260-74061603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-615 | 
| Cow position: | chr3:68888780-68888432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-622 | 
| Cow position: | chr3:81371280-81371621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 298, 10 | 
| Conread position: | 267-624 | 
| Cow position: | chr3:3596118-3595762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-625 | 
| Cow position: | chr3:18066758-18067115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 10 | 
| Conread position: | 267-625 | 
| Cow position: | chr3:23169446-23169089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 10 | 
| Conread position: | 267-626 | 
| Cow position: | chr3:67929647-67929285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 10 | 
| Conread position: | 267-628 | 
| Cow position: | chr3:2674653-2675006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 257, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:859359-859719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:3618593-3618953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:5361998-5361638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:7696643-7697003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:8331069-8331429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:11418339-11418699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:14863581-14863221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:15233370-15233011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:19691702-19691345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:21155229-21155589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:24433169-24433529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:24442314-24441954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:28668896-28668536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:29461392-29461032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:30352074-30352434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 239, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:30609675-30609315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:30859391-30859751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:32769604-32769965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 105, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:36417532-36417892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:36728570-36728930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:38748173-38748534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 91, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:40205410-40205050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:40520147-40519788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:41569167-41568807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 214, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:45946733-45946373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 80, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:47106712-47107072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:48059798-48059438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 80, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:49530994-49530634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:49610423-49610063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:50960006-50960366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:51857643-51858003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:52045227-52044867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:52149492-52149126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:53519571-53519926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 115, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:55246242-55246602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:55837634-55837988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:56484462-56484102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:67264580-67264940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 247, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:68869962-68869606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-630 | 
| Cow position: | chr3:80741663-80742023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-632 | 
| Cow position: | chr3:61191293-61190942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 242, 10 | 
| Conread position: | 267-636 | 
| Cow position: | chr3:46856588-46856224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 242, 7 | 
| Conread position: | 268-514 | 
| Cow position: | chr3:1498498-1498739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 269-433 | 
| Cow position: | chr3:49674423-49674582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 273-568 | 
| Cow position: | chr3:54495691-54495986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 220, 207 | 
| Conread position: | 274-485 | 
| Cow position: | chr3:7661520-7661727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 275-513 | 
| Cow position: | chr3:58286267-58286034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 20, 70 | 
| Conread position: | 275-597 | 
| Cow position: | chr3:75265143-75264816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 234, 262 | 
| Conread position: | 276-484 | 
| Cow position: | chr3:40284549-40284341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 276-512 | 
| Cow position: | chr3:82473682-82473920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 91, 194 | 
| Conread position: | 276-542 | 
| Cow position: | chr3:16380946-16380680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 233, 247 | 
| Conread position: | 276-574 | 
| Cow position: | chr3:62541945-62542240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 221, 185 | 
| Conread position: | 276-607 | 
| Cow position: | chr3:20802997-20802664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 232, 70 | 
| Conread position: | 277-373 | 
| Cow position: | chr3:20488616-20488712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 97 | 
| Alignm identity: | 81 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-375 | 
| Cow position: | chr3:69127159-69127062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 277-376 | 
| Cow position: | chr3:76138072-76138171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-378 | 
| Cow position: | chr3:83928524-83928624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 277-383 | 
| Cow position: | chr3:24572270-24572164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 107 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-393 | 
| Cow position: | chr3:29328133-29328017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-394 | 
| Cow position: | chr3:2118269-2118388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 277-394 | 
| Cow position: | chr3:34556589-34556471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 111, 0 | 
| Conread position: | 277-394 | 
| Cow position: | chr3:49133907-49133790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-394 | 
| Cow position: | chr3:51256739-51256856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-394 | 
| Cow position: | chr3:65391652-65391769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-394 | 
| Cow position: | chr3:66968078-66967961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-394 | 
| Cow position: | chr3:78559735-78559618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-395 | 
| Cow position: | chr3:73450514-73450393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 277-401 | 
| Cow position: | chr3:59621972-59621851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 277-401 | 
| Cow position: | chr3:70335584-70335463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 277-405 | 
| Cow position: | chr3:35110027-35110154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 277-410 | 
| Cow position: | chr3:73930768-73930639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 277-410 | 
| Cow position: | chr3:84597570-84597438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 277-414 | 
| Cow position: | chr3:58835437-58835300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-420 | 
| Cow position: | chr3:8591708-8591570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 277-422 | 
| Cow position: | chr3:74110026-74110174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 277-424 | 
| Cow position: | chr3:24934991-24935131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 68, 19 | 
| Conread position: | 277-430 | 
| Cow position: | chr3:30355857-30356009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 277-430 | 
| Cow position: | chr3:56301994-56301838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 84, 113 | 
| Conread position: | 277-431 | 
| Cow position: | chr3:77565112-77565266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-433 | 
| Cow position: | chr3:26931257-26931101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-433 | 
| Cow position: | chr3:59608140-59608295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 23, 67 | 
| Conread position: | 277-433 | 
| Cow position: | chr3:68704988-68704832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-434 | 
| Cow position: | chr3:3289421-3289578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-434 | 
| Cow position: | chr3:43189466-43189307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 277-441 | 
| Cow position: | chr3:9116542-9116702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 277-449 | 
| Cow position: | chr3:25673492-25673329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 277-450 | 
| Cow position: | chr3:56914679-56914850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 277-452 | 
| Cow position: | chr3:4344224-4344400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 68, 148 | 
| Conread position: | 277-452 | 
| Cow position: | chr3:43105204-43105383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 277-452 | 
| Cow position: | chr3:45184208-45184039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 277-452 | 
| Cow position: | chr3:58766924-58767086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 13, 30 | 
| Conread position: | 277-452 | 
| Cow position: | chr3:80444706-80444531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-452 | 
| Cow position: | chr3:83437470-83437295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-454 | 
| Cow position: | chr3:13513102-13512928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 277-454 | 
| Cow position: | chr3:20562077-20561901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 157, 0 | 
| Conread position: | 277-454 | 
| Cow position: | chr3:26832994-26832827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 277-454 | 
| Cow position: | chr3:41679925-41680104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 277-455 | 
| Cow position: | chr3:4120492-4120666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 152, 41 | 
| Conread position: | 277-456 | 
| Cow position: | chr3:16290934-16290764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:20378923-20378748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:20746948-20746767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:26722014-26721835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 132, 110 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:37982489-37982308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:54766755-54766932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 144, 100 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:57022210-57022386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:60174845-60174658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:73926533-73926357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 149, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:79094434-79094258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 277-457 | 
| Cow position: | chr3:79272158-79271980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 75, 124 | 
| Conread position: | 277-459 | 
| Cow position: | chr3:75938638-75938458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 277-462 | 
| Cow position: | chr3:38096701-38096886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-464 | 
| Cow position: | chr3:70701629-70701816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 155, 161 | 
| Conread position: | 277-465 | 
| Cow position: | chr3:31422314-31422126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-465 | 
| Cow position: | chr3:60618258-60618448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 177, 0 | 
| Conread position: | 277-468 | 
| Cow position: | chr3:18815289-18815480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 125, 130 | 
| Conread position: | 277-468 | 
| Cow position: | chr3:73305742-73305933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-470 | 
| Cow position: | chr3:52486914-52487107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-470 | 
| Cow position: | chr3:53223016-53222817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 277-472 | 
| Cow position: | chr3:22946222-22946027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 131, 160 | 
| Conread position: | 277-473 | 
| Cow position: | chr3:8012325-8012522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 27, 22 | 
| Conread position: | 277-476 | 
| Cow position: | chr3:579980-580179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-476 | 
| Cow position: | chr3:6384301-6384499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 277-476 | 
| Cow position: | chr3:42187284-42187486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 135, 153 | 
| Conread position: | 277-476 | 
| Cow position: | chr3:60054608-60054809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 111, 65 | 
| Conread position: | 277-476 | 
| Cow position: | chr3:60701459-60701253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 110, 71 | 
| Conread position: | 277-476 | 
| Cow position: | chr3:67398198-67397998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 277-476 | 
| Cow position: | chr3:73393647-73393449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 277-478 | 
| Cow position: | chr3:49907234-49907034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 187, 0 | 
| Conread position: | 277-479 | 
| Cow position: | chr3:20997340-20997147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 277-479 | 
| Cow position: | chr3:29391313-29391116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 158, 48 | 
| Conread position: | 277-479 | 
| Cow position: | chr3:66014037-66014240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 170, 0 | 
| Conread position: | 277-480 | 
| Cow position: | chr3:10411114-10410912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 277-485 | 
| Cow position: | chr3:40630121-40629910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 277-487 | 
| Cow position: | chr3:33268692-33268485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 137, 0 | 
| Conread position: | 277-487 | 
| Cow position: | chr3:42885313-42885523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-487 | 
| Cow position: | chr3:53407621-53407411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-491 | 
| Cow position: | chr3:68682361-68682146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 277-492 | 
| Cow position: | chr3:174566-174776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 277-492 | 
| Cow position: | chr3:56576018-56575808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 160, 0 | 
| Conread position: | 277-507 | 
| Cow position: | chr3:15530434-15530659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 277-511 | 
| Cow position: | chr3:56375933-56376171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 277-511 | 
| Cow position: | chr3:72615092-72615325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 172, 108 | 
| Conread position: | 277-511 | 
| Cow position: | chr3:74849406-74849177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 277-512 | 
| Cow position: | chr3:6402929-6403159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 0 | 
| Conread position: | 277-512 | 
| Cow position: | chr3:68291201-68291432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 277-512 | 
| Cow position: | chr3:71257577-71257346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 73, 120 | 
| Conread position: | 277-513 | 
| Cow position: | chr3:41818456-41818228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 277-513 | 
| Cow position: | chr3:50329443-50329211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 190, 0 | 
| Conread position: | 277-513 | 
| Cow position: | chr3:75143400-75143168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 190, 0 | 
| Conread position: | 277-514 | 
| Cow position: | chr3:3776666-3776903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 104, 199 | 
| Conread position: | 277-514 | 
| Cow position: | chr3:15557593-15557833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 74, 227 | 
| Conread position: | 277-514 | 
| Cow position: | chr3:15571289-15571519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 157, 0 | 
| Conread position: | 277-514 | 
| Cow position: | chr3:51315123-51315351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 277-514 | 
| Cow position: | chr3:68302960-68303197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 277-516 | 
| Cow position: | chr3:18917732-18917976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 217, 0 | 
| Conread position: | 277-519 | 
| Cow position: | chr3:19109371-19109607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 71, 23 | 
| Conread position: | 277-520 | 
| Cow position: | chr3:62824851-62824614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 184, 0 | 
| Conread position: | 277-521 | 
| Cow position: | chr3:70754000-70754242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 116, 71 | 
| Conread position: | 277-522 | 
| Cow position: | chr3:41947482-41947245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 277-522 | 
| Cow position: | chr3:51032977-51033219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 277-523 | 
| Cow position: | chr3:6433928-6434171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 217, 20 | 
| Conread position: | 277-523 | 
| Cow position: | chr3:36802423-36802176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-523 | 
| Cow position: | chr3:39232512-39232759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-526 | 
| Cow position: | chr3:34953286-34953535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 245, 231 | 
| Conread position: | 277-527 | 
| Cow position: | chr3:27242883-27242640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 232, 56 | 
| Conread position: | 277-528 | 
| Cow position: | chr3:82618023-82618267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 244, 142 | 
| Conread position: | 277-533 | 
| Cow position: | chr3:23011152-23011403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 232, 65 | 
| Conread position: | 277-533 | 
| Cow position: | chr3:75050414-75050175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 236, 110 | 
| Conread position: | 277-535 | 
| Cow position: | chr3:3836808-3836543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 18, 214 | 
| Conread position: | 277-536 | 
| Cow position: | chr3:47272079-47271814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 159, 65 | 
| Conread position: | 277-537 | 
| Cow position: | chr3:38870366-38870623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 239, 182 | 
| Conread position: | 277-537 | 
| Cow position: | chr3:51014204-51013945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 232, 128 | 
| Conread position: | 277-537 | 
| Cow position: | chr3:68878078-68877819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 224, 149 | 
| Conread position: | 277-542 | 
| Cow position: | chr3:3651431-3651162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 182, 111 | 
| Conread position: | 277-542 | 
| Cow position: | chr3:10244460-10244726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 232, 249 | 
| Conread position: | 277-542 | 
| Cow position: | chr3:12872895-12873153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 103, 127 | 
| Conread position: | 277-542 | 
| Cow position: | chr3:13326532-13326266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 74, 65 | 
| Conread position: | 277-542 | 
| Cow position: | chr3:17865227-17865485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 232, 169 | 
| Conread position: | 277-542 | 
| Cow position: | chr3:67782993-67782732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 232, 71 | 
| Conread position: | 277-543 | 
| Cow position: | chr3:23735470-23735205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 73, 36 | 
| Conread position: | 277-543 | 
| Cow position: | chr3:28357967-28357700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 247 | 
| Conread position: | 277-543 | 
| Cow position: | chr3:79905280-79905024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 237, 110 | 
| Conread position: | 277-543 | 
| Cow position: | chr3:80818368-80818622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 238, 76 | 
| Conread position: | 277-546 | 
| Cow position: | chr3:1830933-1830672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 86, 145 | 
| Conread position: | 277-546 | 
| Cow position: | chr3:50762752-50763026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 80, 62 | 
| Conread position: | 277-549 | 
| Cow position: | chr3:73962047-73961780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 244, 181 | 
| Conread position: | 277-552 | 
| Cow position: | chr3:18895414-18895691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 232, 169 | 
| Conread position: | 277-553 | 
| Cow position: | chr3:38346835-38347107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 232, 77 | 
| Conread position: | 277-556 | 
| Cow position: | chr3:8753096-8753374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 158, 109 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:6193117-6192836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:14724930-14725210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 232, 41 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:18933071-18933352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 232, 260 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:35283453-35283186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 247, 71 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:39065965-39066246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 231, 193 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:40051945-40052225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 72, 65 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:41396168-41396449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:42461332-42461609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 245, 181 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:48370763-48371043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 237, 245 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:50217789-50218070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:54808791-54809068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 232, 181 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:62999364-62999089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 244, 20 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:66738405-66738686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 170, 109 | 
| Conread position: | 277-557 | 
| Cow position: | chr3:84419150-84418874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 224, 109 | 
| Conread position: | 277-558 | 
| Cow position: | chr3:13517523-13517250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 232, 142 | 
| Conread position: | 277-558 | 
| Cow position: | chr3:20663906-20663624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 246, 0 | 
| Conread position: | 277-558 | 
| Cow position: | chr3:20998048-20997770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 231, 182 | 
| Conread position: | 277-558 | 
| Cow position: | chr3:24350762-24351033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 232, 79 | 
| Conread position: | 277-558 | 
| Cow position: | chr3:30567915-30568197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 232, 249 | 
| Conread position: | 277-558 | 
| Cow position: | chr3:64875502-64875223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 232, 15 | 
| Conread position: | 277-558 | 
| Cow position: | chr3:65236651-65236934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 82, 166 | 
| Conread position: | 277-561 | 
| Cow position: | chr3:35919360-35919645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 232, 272 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:997586-997878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:2903666-2903381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 88, 198 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:3032033-3032322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 166, 64 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:3954127-3954413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 212, 184 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:6265138-6265429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:6863993-6863704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 232, 89 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:8159587-8159871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 232, 109 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:11026558-11026838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 232, 169 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:13274746-13274456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 232, 249 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:18393750-18393471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 90, 12 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:21100603-21100890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 232, 71 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:21341331-21341045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 246, 101 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:22089650-22089361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 216, 162 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:27285861-27286149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 236, 55 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:39857775-39858063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 232, 98 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:40827486-40827776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 232, 249 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:45026146-45025857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 232, 80 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:46506572-46506863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 217, 109 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:47978335-47978626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 217, 185 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:48252527-48252801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 23, 126 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:51255406-51255705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 85, 195 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:53903821-53904096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:54434606-54434891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 78, 7 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:59473748-59474036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 200, 96 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:61678321-61678611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 194 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:72169088-72168800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 246, 68 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:75038041-75037751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 232, 250 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:78023647-78023357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 232, 249 | 
| Conread position: | 277-566 | 
| Cow position: | chr3:81102132-81102421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 232, 178 | 
| Conread position: | 277-567 | 
| Cow position: | chr3:1133460-1133173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 214, 71 | 
| Conread position: | 277-567 | 
| Cow position: | chr3:14456271-14455984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 129, 65 | 
| Conread position: | 277-567 | 
| Cow position: | chr3:59514755-59515021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 277-568 | 
| Cow position: | chr3:3301758-3302047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 243, 0 | 
| Conread position: | 277-568 | 
| Cow position: | chr3:14830458-14830172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 232, 166 | 
| Conread position: | 277-568 | 
| Cow position: | chr3:18863238-18863529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 232, 283 | 
| Conread position: | 277-568 | 
| Cow position: | chr3:24265998-24266289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 232, 283 | 
| Conread position: | 277-568 | 
| Cow position: | chr3:44335187-44335476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 241, 229 | 
| Conread position: | 277-568 | 
| Cow position: | chr3:68696176-68695886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 232, 111 | 
| Conread position: | 277-568 | 
| Cow position: | chr3:69345185-69344899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 232, 65 | 
| Conread position: | 277-573 | 
| Cow position: | chr3:14864673-14864968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 232, 20 | 
| Conread position: | 277-574 | 
| Cow position: | chr3:22919321-22919620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 239, 261 | 
| Conread position: | 277-574 | 
| Cow position: | chr3:55058091-55058389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 244, 109 | 
| Conread position: | 277-578 | 
| Cow position: | chr3:72776872-72777180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 217 | 
| Conread position: | 277-579 | 
| Cow position: | chr3:39328044-39328328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 244, 110 | 
| Conread position: | 277-580 | 
| Cow position: | chr3:15662066-15661766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 114, 71 | 
| Conread position: | 277-580 | 
| Cow position: | chr3:59001113-59000819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 290, 109 | 
| Conread position: | 277-580 | 
| Cow position: | chr3:77271645-77271340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 82, 23 | 
| Conread position: | 277-580 | 
| Cow position: | chr3:79208357-79208064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 231, 12 | 
| Conread position: | 277-585 | 
| Cow position: | chr3:3164860-3164556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 240, 38 | 
| Conread position: | 277-585 | 
| Cow position: | chr3:14263027-14263334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 232, 73 | 
| Conread position: | 277-585 | 
| Cow position: | chr3:72390715-72391024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 78, 107 | 
| Conread position: | 277-586 | 
| Cow position: | chr3:18459888-18459580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 244, 190 | 
| Conread position: | 277-587 | 
| Cow position: | chr3:4135186-4134872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-587 | 
| Cow position: | chr3:5420231-5419922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 260, 39 | 
| Conread position: | 277-587 | 
| Cow position: | chr3:19797302-19796988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 232, 249 | 
| Conread position: | 277-587 | 
| Cow position: | chr3:26554082-26553773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 71, 101 | 
| Conread position: | 277-587 | 
| Cow position: | chr3:37186473-37186767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 236, 65 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:26903749-26904052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 110, 79 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:26920531-26920849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 86, 41 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:35852837-35852533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 88, 118 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:44535128-44534818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 90, 106 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:49382584-49382889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 244, 209 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:59588151-59588461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 184 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:59630868-59630560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 111, 191 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:67161568-67161884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 169, 54 | 
| Conread position: | 277-588 | 
| Cow position: | chr3:80053901-80053597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 245, 13 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:4461856-4461547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 50 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:6689627-6689945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 124, 25 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:16157317-16157624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 182, 77 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:26742072-26741757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 232, 17 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:27544702-27544390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 90, 65 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:29560285-29559970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 232, 261 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:31056370-31056061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 255 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:31298525-31298211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 210, 64 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:31419328-31419644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 77, 168 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:44927614-44927930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:65179174-65179481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 232, 135 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:68259518-68259837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:69486337-69486653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 232, 0 | 
| Conread position: | 277-589 | 
| Cow position: | chr3:79592256-79591939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 71 | 
| Conread position: | 277-590 | 
| Cow position: | chr3:5365317-5365622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 78, 174 | 
| Conread position: | 277-590 | 
| Cow position: | chr3:66829150-66828835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 110, 250 | 
| Conread position: | 277-594 | 
| Cow position: | chr3:4457442-4457126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 210, 27 | 
| Conread position: | 277-594 | 
| Cow position: | chr3:69751069-69750753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 110, 176 | 
| Conread position: | 277-594 | 
| Cow position: | chr3:79220482-79220800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 111, 15 | 
| Conread position: | 277-595 | 
| Cow position: | chr3:36672372-36672041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 111, 38 | 
| Conread position: | 277-595 | 
| Cow position: | chr3:42177788-42178107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 43, 119 | 
| Conread position: | 277-595 | 
| Cow position: | chr3:57554213-57553902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 56 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:2364459-2364134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 232, 306 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:28748015-28748342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 155, 220 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:31023118-31023442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 232, 15 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:35884321-35884001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 158, 165 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:42930039-42929716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 232, 184 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:42976515-42976192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 220, 203 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:48574108-48573784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 200, 103 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:56158798-56159120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 110, 167 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:64375919-64375597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 83, 102 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:75727957-75727632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 158, 186 | 
| Conread position: | 277-597 | 
| Cow position: | chr3:77188081-77188390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 232, 65 | 
| Conread position: | 277-599 | 
| Cow position: | chr3:22872420-22872094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 190 | 
| Conread position: | 277-600 | 
| Cow position: | chr3:77753727-77754053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 232, 246 | 
| Conread position: | 277-601 | 
| Cow position: | chr3:25690425-25690746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 236, 59 | 
| Conread position: | 277-602 | 
| Cow position: | chr3:14466072-14465757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 288, 142 | 
| Conread position: | 277-603 | 
| Cow position: | chr3:15655512-15655190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 237, 80 | 
| Conread position: | 277-603 | 
| Cow position: | chr3:80082185-80081866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 289, 124 | 
| Conread position: | 277-605 | 
| Cow position: | chr3:22021339-22021018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 289, 40 | 
| Conread position: | 277-606 | 
| Cow position: | chr3:2007906-2008220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 277-607 | 
| Cow position: | chr3:61839923-61840235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 247, 79 | 
| Conread position: | 277-607 | 
| Cow position: | chr3:64716655-64716985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 130, 88 | 
| Conread position: | 277-607 | 
| Cow position: | chr3:66374961-66375280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 232, 64 | 
| Conread position: | 277-607 | 
| Cow position: | chr3:72131669-72131335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 78, 183 | 
| Conread position: | 277-609 | 
| Cow position: | chr3:28635096-28634765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 239, 22 | 
| Conread position: | 277-610 | 
| Cow position: | chr3:13248219-13247889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 128, 29 | 
| Conread position: | 277-611 | 
| Cow position: | chr3:49119400-49119063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 124, 248 | 
| Conread position: | 277-615 | 
| Cow position: | chr3:35612943-35613283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 232, 318 | 
| Conread position: | 277-616 | 
| Cow position: | chr3:11410469-11410128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 232, 55 | 
| Conread position: | 277-618 | 
| Cow position: | chr3:49793045-49793364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 75, 112 | 
| Conread position: | 277-619 | 
| Cow position: | chr3:48241253-48241588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 176 | 
| Conread position: | 277-619 | 
| Cow position: | chr3:80564593-80564936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 71, 48 | 
| Conread position: | 277-623 | 
| Cow position: | chr3:10346979-10347326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 84, 69 | 
| Conread position: | 277-624 | 
| Cow position: | chr3:53384651-53384307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 164 | 
| Conread position: | 277-624 | 
| Cow position: | chr3:56582479-56582815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 289, 38 | 
| Conread position: | 277-625 | 
| Cow position: | chr3:5851295-5850955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 109 | 
| Conread position: | 277-625 | 
| Cow position: | chr3:9843210-9843561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 80, 116 | 
| Conread position: | 277-625 | 
| Cow position: | chr3:15387837-15388187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 86, 281 | 
| Conread position: | 277-625 | 
| Cow position: | chr3:54782379-54782035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 113, 76 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:15954444-15954108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 288, 32 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:17695371-17695025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 69 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:27289569-27289916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 189 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:45523897-45524244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 236, 71 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:48269495-48269842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 288, 233 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:49230647-49230995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 200, 100 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:49461305-49460949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 327 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:52017392-52017748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 110, 100 | 
| Conread position: | 277-628 | 
| Cow position: | chr3:53593067-53592712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 189, 65 | 
| Conread position: | 277-629 | 
| Cow position: | chr3:9663555-9663194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 182, 258 | 
| Conread position: | 277-630 | 
| Cow position: | chr3:42452142-42452499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 110, 185 | 
| Conread position: | 277-630 | 
| Cow position: | chr3:59603599-59603950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 232, 182 | 
| Conread position: | 277-631 | 
| Cow position: | chr3:364576-364232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 237, 26 | 
| Conread position: | 277-631 | 
| Cow position: | chr3:49650013-49650368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 38 | 
| Conread position: | 278-394 | 
| Cow position: | chr3:7360187-7360071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 278-394 | 
| Cow position: | chr3:19884255-19884371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 278-430 | 
| Cow position: | chr3:5405602-5405449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 278-433 | 
| Cow position: | chr3:17899457-17899608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 278-433 | 
| Cow position: | chr3:36230197-36230352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 278-453 | 
| Cow position: | chr3:63177145-63177319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 76, 117 | 
| Conread position: | 278-456 | 
| Cow position: | chr3:2630428-2630613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 37, 76 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:597922-598101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:6799369-6799188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 56, 52 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:10958592-10958417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:13480497-13480674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:20780245-20780064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 150, 84 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:21112987-21112810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:45700467-45700645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 161, 0 | 
| Conread position: | 278-457 | 
| Cow position: | chr3:64216372-64216555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 278-459 | 
| Cow position: | chr3:81057725-81057544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 278-470 | 
| Cow position: | chr3:6754486-6754677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 160, 0 | 
| Conread position: | 278-470 | 
| Cow position: | chr3:24763675-24763481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 183, 0 | 
| Conread position: | 278-470 | 
| Cow position: | chr3:56328990-56329182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 278-502 | 
| Cow position: | chr3:44421759-44421983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 73, 64 | 
| Conread position: | 278-512 | 
| Cow position: | chr3:58953931-58954164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 75, 113 | 
| Conread position: | 278-513 | 
| Cow position: | chr3:54340779-54340546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 118, 35 | 
| Conread position: | 278-514 | 
| Cow position: | chr3:2627953-2628183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 52, 32 | 
| Conread position: | 278-515 | 
| Cow position: | chr3:47737253-47737023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 278-531 | 
| Cow position: | chr3:11785152-11785407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 231, 0 | 
| Conread position: | 278-537 | 
| Cow position: | chr3:18245783-18245531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 128, 99 | 
| Conread position: | 278-537 | 
| Cow position: | chr3:66623987-66624245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 24, 204 | 
| Conread position: | 278-539 | 
| Cow position: | chr3:58951254-58951511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 0 | 
| Conread position: | 278-540 | 
| Cow position: | chr3:22908198-22907940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 178, 70 | 
| Conread position: | 278-542 | 
| Cow position: | chr3:24939587-24939332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 243, 15 | 
| Conread position: | 278-542 | 
| Cow position: | chr3:32326148-32325883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 231, 0 | 
| Conread position: | 278-542 | 
| Cow position: | chr3:63945343-63945082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 56, 132 | 
| Conread position: | 278-545 | 
| Cow position: | chr3:57457441-57457706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 243, 62 | 
| Conread position: | 278-556 | 
| Cow position: | chr3:2431221-2430932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 59, 257 | 
| Conread position: | 278-558 | 
| Cow position: | chr3:51012905-51012623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 50, 199 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:7280459-7280748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 231, 248 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:10017747-10018036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 231, 248 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:18279800-18279512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 28, 184 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:31206506-31206792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 40 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:46350280-46350587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:53573117-53572837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 245, 180 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:60092945-60092660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 231, 58 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:69930037-69929748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 229, 248 | 
| Conread position: | 278-566 | 
| Cow position: | chr3:78782607-78782880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 112, 132 | 
| Conread position: | 278-568 | 
| Cow position: | chr3:31078562-31078281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 231, 137 | 
| Conread position: | 278-568 | 
| Cow position: | chr3:31147275-31147565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 231, 282 | 
| Conread position: | 278-568 | 
| Cow position: | chr3:44352363-44352653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 231, 282 | 
| Conread position: | 278-568 | 
| Cow position: | chr3:64198114-64198403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 73, 64 | 
| Conread position: | 278-573 | 
| Cow position: | chr3:55085557-55085254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 195 | 
| Conread position: | 278-576 | 
| Cow position: | chr3:55117336-55117035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 234, 69 | 
| Conread position: | 278-577 | 
| Cow position: | chr3:62826980-62826689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 246, 54 | 
| Conread position: | 278-587 | 
| Cow position: | chr3:23277909-23277602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 109, 68 | 
| Conread position: | 278-588 | 
| Cow position: | chr3:19708464-19708162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 243, 60 | 
| Conread position: | 278-588 | 
| Cow position: | chr3:66610205-66609901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 243, 165 | 
| Conread position: | 278-589 | 
| Cow position: | chr3:53879464-53879149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 73, 64 | 
| Conread position: | 278-589 | 
| Cow position: | chr3:57577333-57577640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 236, 40 | 
| Conread position: | 278-590 | 
| Cow position: | chr3:26219428-26219108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 191, 118 | 
| Conread position: | 278-592 | 
| Cow position: | chr3:8716880-8717198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 108 | 
| Conread position: | 278-593 | 
| Cow position: | chr3:58383595-58383913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 72, 195 | 
| Conread position: | 278-594 | 
| Cow position: | chr3:53221661-53221961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 239, 55 | 
| Conread position: | 278-595 | 
| Cow position: | chr3:13352993-13353310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 240, 110 | 
| Conread position: | 278-595 | 
| Cow position: | chr3:13899820-13899497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 235, 0 | 
| Conread position: | 278-602 | 
| Cow position: | chr3:36570406-36570091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 7, 25 | 
| Conread position: | 278-610 | 
| Cow position: | chr3:2594757-2595087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 284, 231 | 
| Conread position: | 278-618 | 
| Cow position: | chr3:60597187-60597512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 243, 37 | 
| Conread position: | 278-623 | 
| Cow position: | chr3:30179717-30180058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 78 | 
| Conread position: | 278-625 | 
| Cow position: | chr3:28908570-28908229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 83, 189 | 
| Conread position: | 278-625 | 
| Cow position: | chr3:43528604-43528262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 288, 189 | 
| Conread position: | 278-628 | 
| Cow position: | chr3:11986964-11987306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 231, 76 | 
| Conread position: | 278-629 | 
| Cow position: | chr3:24166197-24166541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 231, 64 | 
| Conread position: | 278-630 | 
| Cow position: | chr3:83479209-83479560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 231, 319 | 
| Conread position: | 279-448 | 
| Cow position: | chr3:80469017-80468847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 84, 104 | 
| Conread position: | 279-464 | 
| Cow position: | chr3:39945131-39944949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 156, 63 | 
| Conread position: | 279-484 | 
| Cow position: | chr3:19711681-19711477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 0 | 
| Conread position: | 279-507 | 
| Cow position: | chr3:6897996-6898205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 279-512 | 
| Cow position: | chr3:470796-470559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 5, 16 | 
| Conread position: | 279-512 | 
| Cow position: | chr3:37580690-37580451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 279-529 | 
| Cow position: | chr3:8901050-8901299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 78, 135 | 
| Conread position: | 279-537 | 
| Cow position: | chr3:48605330-48605589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 230, 247 | 
| Conread position: | 279-542 | 
| Cow position: | chr3:34526010-34525746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 237, 107 | 
| Conread position: | 279-543 | 
| Cow position: | chr3:58158818-58158569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 239, 58 | 
| Conread position: | 279-558 | 
| Cow position: | chr3:26894305-26894570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 244, 67 | 
| Conread position: | 279-566 | 
| Cow position: | chr3:6078701-6078413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 244, 0 | 
| Conread position: | 279-566 | 
| Cow position: | chr3:6853869-6853588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 75, 110 | 
| Conread position: | 279-566 | 
| Cow position: | chr3:14552514-14552793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 242, 13 | 
| Conread position: | 279-566 | 
| Cow position: | chr3:55039788-55039501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 198, 183 | 
| Conread position: | 279-585 | 
| Cow position: | chr3:42563089-42563392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 112, 69 | 
| Conread position: | 279-588 | 
| Cow position: | chr3:79884852-79884540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 237, 107 | 
| Conread position: | 279-593 | 
| Cow position: | chr3:12675395-12675086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 115, 54 | 
| Conread position: | 279-624 | 
| Cow position: | chr3:65968795-65969140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 48, 20 | 
| Conread position: | 279-630 | 
| Cow position: | chr3:68042811-68042464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 230, 122 | 
| Conread position: | 280-394 | 
| Cow position: | chr3:37972822-37972936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 280-449 | 
| Cow position: | chr3:53429253-53429086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 107, 66 | 
| Conread position: | 280-454 | 
| Cow position: | chr3:63688127-63687954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 280-457 | 
| Cow position: | chr3:64536907-64536732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 159, 106 | 
| Conread position: | 280-476 | 
| Cow position: | chr3:49564820-49565016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 70, 62 | 
| Conread position: | 280-508 | 
| Cow position: | chr3:2334920-2335145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 280-512 | 
| Cow position: | chr3:40101036-40100808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 280-514 | 
| Cow position: | chr3:2537892-2538117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 280-543 | 
| Cow position: | chr3:24639225-24639487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 234, 107 | 
| Conread position: | 280-555 | 
| Cow position: | chr3:79921456-79921180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 229, 0 | 
| Conread position: | 280-566 | 
| Cow position: | chr3:33124457-33124171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 228, 98 | 
| Conread position: | 280-568 | 
| Cow position: | chr3:78472187-78471900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 229, 86 | 
| Conread position: | 280-588 | 
| Cow position: | chr3:34270569-34270857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 287, 66 | 
| Conread position: | 280-589 | 
| Cow position: | chr3:5101125-5100824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 118 | 
| Conread position: | 280-595 | 
| Cow position: | chr3:61278549-61278863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 51, 12 | 
| Conread position: | 280-607 | 
| Cow position: | chr3:65413652-65413322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 74, 125 | 
| Conread position: | 280-628 | 
| Cow position: | chr3:61539432-61539783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 62 | 
| Conread position: | 280-631 | 
| Cow position: | chr3:50614280-50614621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 107, 90 | 
| Conread position: | 281-433 | 
| Cow position: | chr3:20519881-20520033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 281-453 | 
| Cow position: | chr3:55110207-55110036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 111, 0 | 
| Conread position: | 281-464 | 
| Cow position: | chr3:17885321-17885504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 281-600 | 
| Cow position: | chr3:30531597-30531912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 228, 38 | 
| Conread position: | 281-617 | 
| Cow position: | chr3:55190109-55189793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 154, 23 | 
| Conread position: | 281-625 | 
| Cow position: | chr3:22676443-22676121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 240, 67 | 
| Conread position: | 282-536 | 
| Cow position: | chr3:15786200-15786454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 177, 205 | 
| Conread position: | 282-584 | 
| Cow position: | chr3:66708433-66708133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 90, 10 | 
| Conread position: | 282-602 | 
| Cow position: | chr3:7566777-7566467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 23 | 
| Conread position: | 283-457 | 
| Cow position: | chr3:43028739-43028565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 18, 10 | 
| Conread position: | 283-472 | 
| Cow position: | chr3:62784940-62784755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 283-492 | 
| Cow position: | chr3:71488679-71488473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 283-514 | 
| Cow position: | chr3:52148038-52147811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 283-584 | 
| Cow position: | chr3:68647798-68648103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 229, 240 | 
| Conread position: | 284-543 | 
| Cow position: | chr3:44535959-44535702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 131, 51 | 
| Conread position: | 284-557 | 
| Cow position: | chr3:18670830-18671104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 225, 240 | 
| Conread position: | 284-576 | 
| Cow position: | chr3:45312691-45312979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 107 | 
| Conread position: | 285-520 | 
| Cow position: | chr3:2901488-2901257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 212, 176 | 
| Conread position: | 285-528 | 
| Cow position: | chr3:7763307-7763545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 102, 33 | 
| Conread position: | 285-566 | 
| Cow position: | chr3:51604967-51604687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 227, 265 | 
| Conread position: | 285-594 | 
| Cow position: | chr3:7857992-7858316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 152, 0 | 
| Conread position: | 285-595 | 
| Cow position: | chr3:5394330-5394016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 224, 0 | 
| Conread position: | 285-623 | 
| Cow position: | chr3:72018763-72019091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 229, 93 | 
| Conread position: | 286-464 | 
| Cow position: | chr3:59604512-59604688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 286-557 | 
| Cow position: | chr3:30358993-30358727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 223, 172 | 
| Conread position: | 286-597 | 
| Cow position: | chr3:7408124-7408440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 223, 0 | 
| Conread position: | 288-489 | 
| Cow position: | chr3:69766593-69766395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 289-476 | 
| Cow position: | chr3:82314963-82314776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 289-487 | 
| Cow position: | chr3:31225095-31225291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 289-511 | 
| Cow position: | chr3:43245862-43245637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 65, 175 | 
| Conread position: | 289-514 | 
| Cow position: | chr3:32363929-32363703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 166, 0 | 
| Conread position: | 289-555 | 
| Cow position: | chr3:48362727-48362990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 232, 136 | 
| Conread position: | 289-558 | 
| Cow position: | chr3:53149970-53150237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 67, 168 | 
| Conread position: | 289-568 | 
| Cow position: | chr3:36595499-36595778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 220, 271 | 
| Conread position: | 289-589 | 
| Cow position: | chr3:25666112-25666401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 220, 161 | 
| Conread position: | 289-594 | 
| Cow position: | chr3:82359677-82359991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 61, 189 | 
| Conread position: | 289-595 | 
| Cow position: | chr3:53270464-53270780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 29, 191 | 
| Conread position: | 290-441 | 
| Cow position: | chr3:55319111-55319262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 290-482 | 
| Cow position: | chr3:80793638-80793446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 290-558 | 
| Cow position: | chr3:65019977-65020245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 77, 186 | 
| Conread position: | 290-595 | 
| Cow position: | chr3:37637331-37637024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 219, 0 | 
| Conread position: | 290-603 | 
| Cow position: | chr3:17952301-17952613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 234, 191 | 
| Conread position: | 290-631 | 
| Cow position: | chr3:13117992-13118322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 65, 90 | 
| Conread position: | 291-457 | 
| Cow position: | chr3:11031300-11031128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 291-507 | 
| Cow position: | chr3:59344891-59345108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 168, 10 | 
| Conread position: | 291-558 | 
| Cow position: | chr3:29891771-29891503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 189, 138 | 
| Conread position: | 291-566 | 
| Cow position: | chr3:70449993-70450269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 218, 235 | 
| Conread position: | 291-588 | 
| Cow position: | chr3:59366197-59366497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 168, 10 | 
| Conread position: | 291-595 | 
| Cow position: | chr3:83490724-83491035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 164, 23 | 
| Conread position: | 291-608 | 
| Cow position: | chr3:67022208-67022526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 7, 171 | 
| Conread position: | 292-394 | 
| Cow position: | chr3:48994735-48994837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 292-537 | 
| Cow position: | chr3:5456598-5456354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 222, 50 | 
| Conread position: | 293-484 | 
| Cow position: | chr3:66805418-66805608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 293-492 | 
| Cow position: | chr3:41053464-41053656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 293-581 | 
| Cow position: | chr3:12323716-12324009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 163, 83 | 
| Conread position: | 293-585 | 
| Cow position: | chr3:61361065-61361345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 220, 47 | 
| Conread position: | 294-532 | 
| Cow position: | chr3:15549125-15549377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 51, 116 | 
| Conread position: | 295-450 | 
| Cow position: | chr3:50069429-50069584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 53, 78 | 
| Conread position: | 295-578 | 
| Cow position: | chr3:71497496-71497212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 166 | 
| Conread position: | 295-584 | 
| Cow position: | chr3:11254502-11254221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 87, 113 | 
| Conread position: | 296-543 | 
| Cow position: | chr3:80973005-80973251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 213, 14 | 
| Conread position: | 296-566 | 
| Cow position: | chr3:83816150-83815873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 65, 206 | 
| Conread position: | 297-451 | 
| Cow position: | chr3:15377773-15377618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 297-537 | 
| Cow position: | chr3:2707073-2706834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 212, 129 | 
| Conread position: | 297-539 | 
| Cow position: | chr3:27553203-27553448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 216, 91 | 
| Conread position: | 299-459 | 
| Cow position: | chr3:37662803-37662963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 299-505 | 
| Cow position: | chr3:59179063-59179265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 94, 19 | 
| Conread position: | 299-507 | 
| Cow position: | chr3:83988138-83988338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 299-534 | 
| Cow position: | chr3:76091942-76092176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 208, 66 | 
| Conread position: | 299-557 | 
| Cow position: | chr3:11186872-11186613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 210, 0 | 
| Conread position: | 299-566 | 
| Cow position: | chr3:11640091-11640350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 25, 44 | 
| Conread position: | 299-566 | 
| Cow position: | chr3:15081085-15080829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 222, 162 | 
| Conread position: | 299-568 | 
| Cow position: | chr3:22632592-22632861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 210, 261 | 
| Conread position: | 299-584 | 
| Cow position: | chr3:70895701-70895985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 5.99756e-43 | 
| Alignm gaps (pig, cow): | 219, 19 | 
| Conread position: | 299-595 | 
| Cow position: | chr3:31903454-31903165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 224, 88 | 
| Conread position: | 300-433 | 
| Cow position: | chr3:3086254-3086387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 300-537 | 
| Cow position: | chr3:49541107-49540873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 209, 114 | 
| Conread position: | 300-558 | 
| Cow position: | chr3:29311194-29310939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 86, 173 | 
| Conread position: | 300-566 | 
| Cow position: | chr3:7475765-7475504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 209, 59 | 
| Conread position: | 300-580 | 
| Cow position: | chr3:17222496-17222212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 53, 69 | 
| Conread position: | 300-584 | 
| Cow position: | chr3:34096294-34096013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 223, 61 | 
| Conread position: | 300-602 | 
| Cow position: | chr3:58206794-58206495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 258, 17 | 
| Conread position: | 300-606 | 
| Cow position: | chr3:59451250-59451549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 174, 94 | 
| Conread position: | 300-630 | 
| Cow position: | chr3:72801697-72801368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 209, 260 | 
| Conread position: | 301-484 | 
| Cow position: | chr3:58060961-58060778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 301-573 | 
| Cow position: | chr3:61467273-61467530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 223, 47 | 
| Conread position: | 301-588 | 
| Cow position: | chr3:16547332-16547617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 213, 160 | 
| Conread position: | 301-589 | 
| Cow position: | chr3:79292491-79292772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 220, 56 | 
| Conread position: | 302-513 | 
| Cow position: | chr3:41157636-41157422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 86, 182 | 
| Conread position: | 302-543 | 
| Cow position: | chr3:49678778-49679020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 18, 160 | 
| Conread position: | 302-566 | 
| Cow position: | chr3:31309708-31309437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 15, 169 | 
| Conread position: | 302-566 | 
| Cow position: | chr3:58283353-58283089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 207, 224 | 
| Conread position: | 302-597 | 
| Cow position: | chr3:62269515-62269212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 207, 148 | 
| Conread position: | 302-618 | 
| Cow position: | chr3:83474406-83474712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 219, 83 | 
| Conread position: | 303-565 | 
| Cow position: | chr3:22481449-22481188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 206, 39 | 
| Conread position: | 303-566 | 
| Cow position: | chr3:7678336-7678585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 212, 14 | 
| Conread position: | 303-588 | 
| Cow position: | chr3:209980-210258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 154 | 
| Conread position: | 303-625 | 
| Cow position: | chr3:2393314-2392988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 58, 172 | 
| Conread position: | 303-625 | 
| Cow position: | chr3:80071775-80072103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 151, 83 | 
| Conread position: | 304-459 | 
| Cow position: | chr3:36126312-36126467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-459 | 
| Cow position: | chr3:76901853-76902005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 304-559 | 
| Cow position: | chr3:48852302-48852051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 209, 37 | 
| Conread position: | 305-594 | 
| Cow position: | chr3:18184728-18185023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 182, 159 | 
| Conread position: | 305-628 | 
| Cow position: | chr3:61857156-61857486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 208, 289 | 
| Conread position: | 305-630 | 
| Cow position: | chr3:16233919-16233595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 46, 37 | 
| Conread position: | 306-516 | 
| Cow position: | chr3:26218055-26217845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 306-568 | 
| Cow position: | chr3:81471436-81471177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 203, 40 | 
| Conread position: | 306-614 | 
| Cow position: | chr3:55272379-55272082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 215, 66 | 
| Conread position: | 307-566 | 
| Cow position: | chr3:57479667-57479408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 202, 47 | 
| Conread position: | 308-526 | 
| Cow position: | chr3:48900839-48900625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 139, 116 | 
| Conread position: | 309-457 | 
| Cow position: | chr3:76614307-76614454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 309-557 | 
| Cow position: | chr3:27609796-27610045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 200, 0 | 
| Conread position: | 309-588 | 
| Cow position: | chr3:15052278-15052010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 50, 97 | 
| Conread position: | 310-587 | 
| Cow position: | chr3:65058367-65058642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 199, 76 | 
| Conread position: | 311-580 | 
| Cow position: | chr3:78076858-78077123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 155, 37 | 
| Conread position: | 312-589 | 
| Cow position: | chr3:61171835-61171563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 171, 70 | 
| Conread position: | 313-504 | 
| Cow position: | chr3:13350585-13350771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 80, 35 | 
| Conread position: | 314-457 | 
| Cow position: | chr3:59101504-59101646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 137, 0 | 
| Conread position: | 315-473 | 
| Cow position: | chr3:50099162-50099322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 316-589 | 
| Cow position: | chr3:82657414-82657142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 205, 151 | 
| Conread position: | 316-595 | 
| Cow position: | chr3:55970178-55970455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 205, 70 | 
| Conread position: | 316-607 | 
| Cow position: | chr3:67704207-67704502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 42, 149 | 
| Conread position: | 317-590 | 
| Cow position: | chr3:81939926-81940201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 203, 37 | 
| Conread position: | 317-592 | 
| Cow position: | chr3:34571070-34571345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 192, 33 | 
| Conread position: | 318-558 | 
| Cow position: | chr3:69945266-69945025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 191, 206 | 
| Conread position: | 318-588 | 
| Cow position: | chr3:83920874-83921139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 203, 30 | 
| Conread position: | 320-589 | 
| Cow position: | chr3:46900869-46901142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 13, 74 | 
| Conread position: | 322-590 | 
| Cow position: | chr3:2024861-2025129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 185, 145 | 
| Conread position: | 323-581 | 
| Cow position: | chr3:28898550-28898287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 34, 71 | 
| Conread position: | 327-628 | 
| Cow position: | chr3:57754798-57754499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 187, 51 | 
| Conread position: | 327-628 | 
| Cow position: | chr3:78200949-78201245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 190, 196 | 
| Conread position: | 328-464 | 
| Cow position: | chr3:24549149-24549013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 328-594 | 
| Cow position: | chr3:53112851-53113121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 195 | 
| Conread position: | 330-464 | 
| Cow position: | chr3:83728185-83728056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 333-625 | 
| Cow position: | chr3:53790856-53790562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 60, 179 | 
| Conread position: | 333-628 | 
| Cow position: | chr3:46161157-46160866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 154, 139 | 
| Conread position: | 335-625 | 
| Cow position: | chr3:65800285-65800566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 78, 48 | 
| Conread position: | 336-566 | 
| Cow position: | chr3:70675908-70676141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 42, 132 | 
| Conread position: | 339-588 | 
| Cow position: | chr3:53739499-53739244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 25, 173 | 
| Conread position: | 341-565 | 
| Cow position: | chr3:53909810-53910028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 73, 36 | 
| Conread position: | 341-567 | 
| Cow position: | chr3:13330077-13329861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 13, 53 | 
| Conread position: | 342-468 | 
| Cow position: | chr3:37041126-37041250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 342-566 | 
| Cow position: | chr3:2518840-2518615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 181, 0 | 
| Conread position: | 342-580 | 
| Cow position: | chr3:70401600-70401835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 225, 46 | 
| Conread position: | 343-628 | 
| Cow position: | chr3:2216058-2216345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 165, 50 | 
| Conread position: | 344-628 | 
| Cow position: | chr3:72473606-72473892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 179, 250 | 
| Conread position: | 345-595 | 
| Cow position: | chr3:30463466-30463223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 221, 122 | 
| Conread position: | 346-594 | 
| Cow position: | chr3:38691701-38691458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 148, 9 | 
| Conread position: | 348-546 | 
| Cow position: | chr3:59392404-59392207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 165, 40 | 
| Conread position: | 348-576 | 
| Cow position: | chr3:19198384-19198600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 348-602 | 
| Cow position: | chr3:79148573-79148313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 165, 0 | 
| Conread position: | 350-556 | 
| Cow position: | chr3:11019823-11020028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 173, 87 | 
| Conread position: | 350-566 | 
| Cow position: | chr3:70333768-70333559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 159, 38 | 
| Conread position: | 351-567 | 
| Cow position: | chr3:72121-72331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 164, 100 | 
| Conread position: | 353-595 | 
| Cow position: | chr3:25691457-25691703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 165, 134 | 
| Conread position: | 354-566 | 
| Cow position: | chr3:18854802-18855012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 159, 97 | 
| Conread position: | 354-566 | 
| Cow position: | chr3:51609525-51609737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 159, 169 | 
| Conread position: | 354-566 | 
| Cow position: | chr3:73759810-73759599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 39, 60 | 
| Conread position: | 354-576 | 
| Cow position: | chr3:3985039-3985257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 167, 113 | 
| Conread position: | 354-584 | 
| Cow position: | chr3:56059516-56059745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 187, 97 | 
| Conread position: | 354-584 | 
| Cow position: | chr3:66885329-66885103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 117, 102 | 
| Conread position: | 354-587 | 
| Cow position: | chr3:71430502-71430266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 153, 13 | 
| Conread position: | 354-588 | 
| Cow position: | chr3:14602004-14601770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 170, 39 | 
| Conread position: | 354-591 | 
| Cow position: | chr3:19006376-19006604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 164, 107 | 
| Conread position: | 354-593 | 
| Cow position: | chr3:64172154-64172386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 354-626 | 
| Cow position: | chr3:45534590-45534318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 167, 34 | 
| Conread position: | 355-541 | 
| Cow position: | chr3:45647387-45647572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 38, 17 | 
| Conread position: | 355-566 | 
| Cow position: | chr3:29812954-29813161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 166, 38 | 
| Conread position: | 355-587 | 
| Cow position: | chr3:56659-56436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 92, 36 | 
| Conread position: | 355-587 | 
| Cow position: | chr3:23944807-23945039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 178, 101 | 
| Conread position: | 355-588 | 
| Cow position: | chr3:17895564-17895784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 162, 86 | 
| Conread position: | 355-588 | 
| Cow position: | chr3:23471758-23471525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 153, 205 | 
| Conread position: | 355-589 | 
| Cow position: | chr3:17957177-17957407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 158, 54 | 
| Conread position: | 355-589 | 
| Cow position: | chr3:58540820-58540584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 190, 33 | 
| Conread position: | 355-625 | 
| Cow position: | chr3:5096913-5097181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 36, 104 | 
| Conread position: | 355-625 | 
| Cow position: | chr3:78946129-78945857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 44, 71 | 
| Conread position: | 355-626 | 
| Cow position: | chr3:54050309-54050050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 143, 88 | 
| Conread position: | 356-590 | 
| Cow position: | chr3:29596106-29596332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 37, 16 | 
| Conread position: | 357-557 | 
| Cow position: | chr3:39970160-39969960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 167, 152 | 
| Conread position: | 357-565 | 
| Cow position: | chr3:23876710-23876911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 158, 101 | 
| Conread position: | 357-566 | 
| Cow position: | chr3:56704825-56704627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 160, 86 | 
| Conread position: | 357-587 | 
| Cow position: | chr3:34316252-34316017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 158, 0 | 
| Conread position: | 357-588 | 
| Cow position: | chr3:74533060-74533290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 164, 152 | 
| Conread position: | 357-595 | 
| Cow position: | chr3:64281224-64280982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 162, 150 | 
| Conread position: | 358-543 | 
| Cow position: | chr3:33693362-33693544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 142, 0 | 
| Conread position: | 358-566 | 
| Cow position: | chr3:30417842-30418046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 123, 133 | 
| Conread position: | 358-566 | 
| Cow position: | chr3:73467332-73467540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 140, 74 | 
| Conread position: | 358-625 | 
| Cow position: | chr3:66292465-66292202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 131, 35 | 
| Conread position: | 358-625 | 
| Cow position: | chr3:73443374-73443115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 163, 106 | 
| Conread position: | 359-559 | 
| Cow position: | chr3:83369036-83369227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 164, 99 | 
| Conread position: | 359-588 | 
| Cow position: | chr3:4031682-4031912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 158, 97 | 
| Conread position: | 359-595 | 
| Cow position: | chr3:8393060-8393300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 107, 112 | 
| Conread position: | 359-625 | 
| Cow position: | chr3:71161508-71161774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 150, 102 | 
| Conread position: | 360-625 | 
| Cow position: | chr3:19789404-19789140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 117, 101 | 
| Conread position: | 361-566 | 
| Cow position: | chr3:67744912-67744710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 65, 162 | 
| Conread position: | 363-587 | 
| Cow position: | chr3:59208532-59208755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 160, 97 | 
| Conread position: | 363-607 | 
| Cow position: | chr3:39171766-39171524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 155, 112 | 
| Conread position: | 364-584 | 
| Cow position: | chr3:81277985-81277760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 29, 146 | 
| Conread position: | 364-597 | 
| Cow position: | chr3:17456550-17456316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 159, 184 | 
| Conread position: | 364-607 | 
| Cow position: | chr3:77365575-77365334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 63, 78 | 
| Conread position: | 364-628 | 
| Cow position: | chr3:68583283-68583027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 157, 29 | 
| Conread position: | 365-557 | 
| Cow position: | chr3:5416511-5416311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 365-561 | 
| Cow position: | chr3:18607088-18607285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 28, 165 | 
| Conread position: | 365-565 | 
| Cow position: | chr3:34392376-34392181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 156, 31 | 
| Conread position: | 365-585 | 
| Cow position: | chr3:26065721-26065942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 156, 96 | 
| Conread position: | 365-588 | 
| Cow position: | chr3:63861181-63860950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 143, 163 | 
| Conread position: | 365-589 | 
| Cow position: | chr3:57763943-57764170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 156, 144 | 
| Conread position: | 365-602 | 
| Cow position: | chr3:75158085-75158312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 156, 94 | 
| Conread position: | 365-625 | 
| Cow position: | chr3:55124558-55124306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 366-557 | 
| Cow position: | chr3:525075-525258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 158, 93 | 
| Conread position: | 366-566 | 
| Cow position: | chr3:42483621-42483818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 149, 92 | 
| Conread position: | 366-566 | 
| Cow position: | chr3:42588070-42588274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 142, 108 | 
| Conread position: | 366-593 | 
| Cow position: | chr3:49731916-49731694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 151, 27 | 
| Conread position: | 369-566 | 
| Cow position: | chr3:6873521-6873327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 369-568 | 
| Cow position: | chr3:73764469-73764277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 152, 35 | 
| Conread position: | 372-558 | 
| Cow position: | chr3:54945852-54946037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 152, 28 | 
| Conread position: | 373-586 | 
| Cow position: | chr3:70899628-70899834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 148, 91 | 
| Conread position: | 374-580 | 
| Cow position: | chr3:84000341-84000547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 147, 87 | 
| Conread position: | 375-588 | 
| Cow position: | chr3:51578591-51578379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 191, 86 | 
| Conread position: | 375-598 | 
| Cow position: | chr3:13302126-13301898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 60, 103 | 
| Conread position: | 376-529 | 
| Cow position: | chr3:17451203-17451052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 133, 0 | 
| Conread position: | 383-580 | 
| Cow position: | chr3:75080504-75080701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 138, 126 | 
| Conread position: | 383-607 | 
| Cow position: | chr3:73590261-73590038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 10, 32 | 
| Conread position: | 388-593 | 
| Cow position: | chr3:71237900-71238103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 130, 35 | 
| Conread position: | 388-603 | 
| Cow position: | chr3:4087423-4087205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 122, 79 | 
| Conread position: | 388-624 | 
| Cow position: | chr3:52607926-52608155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 133, 121 | 
| Conread position: | 397-623 | 
| Cow position: | chr3:44932260-44932488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 116, 125 | 
| Conread position: | 397-628 | 
| Cow position: | chr3:55947327-55947561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 116, 192 | 
| Conread position: | 402-588 | 
| Cow position: | chr3:4861447-4861625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 119, 5 | 
| Conread position: | 406-604 | 
| Cow position: | chr3:83201767-83201571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 118, 103 | 
| Conread position: | 413-607 | 
| Cow position: | chr3:17447840-17447652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 108, 48 | 
Show alignments to all cow chromosomes.
