Cow genome map
Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
Conread position: | 11-145 |
Cow position: | chr1:31422192-31422058 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-187 |
Cow position: | chr1:20989020-20989200 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 11-244 |
Cow position: | chr1:84149489-84149720 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 166 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 32, 93 |
Conread position: | 11-251 |
Cow position: | chr1:52918549-52918320 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 162 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 11-266 |
Cow position: | chr1:57656614-57656867 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 174 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 237, 7 |
Conread position: | 11-288 |
Cow position: | chr1:99020892-99020618 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 124 |
Conread position: | 11-452 |
Cow position: | chr1:98865084-98864645 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 206 |
Conread position: | 11-490 |
Cow position: | chr1:18014122-18013649 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 293 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 22, 231 |
Conread position: | 11-519 |
Cow position: | chr1:77655770-77656276 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 336 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 284, 7 |
Conread position: | 11-540 |
Cow position: | chr1:44101679-44101167 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 355 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 284, 132 |
Conread position: | 11-540 |
Cow position: | chr1:61738444-61737914 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 7 |
Conread position: | 12-230 |
Cow position: | chr1:87244881-87245098 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 152 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 84, 12 |
Conread position: | 12-240 |
Cow position: | chr1:67835070-67834842 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 158 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 84, 95 |
Conread position: | 12-242 |
Cow position: | chr1:18244315-18244085 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 159 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 84, 92 |
Conread position: | 12-251 |
Cow position: | chr1:13450278-13450515 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 169 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 84, 64 |
Conread position: | 12-251 |
Cow position: | chr1:17012668-17012430 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 156 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 12-251 |
Cow position: | chr1:78360812-78361043 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 162 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 12-255 |
Cow position: | chr1:32342006-32341767 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 170 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 164, 0 |
Conread position: | 12-266 |
Cow position: | chr1:8825120-8825372 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 171 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 83, 96 |
Conread position: | 12-266 |
Cow position: | chr1:89770615-89770361 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 172 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 229, 250 |
Conread position: | 12-271 |
Cow position: | chr1:46835593-46835853 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 178 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 83, 121 |
Conread position: | 12-272 |
Cow position: | chr1:102434969-102434711 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 177 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 12-298 |
Cow position: | chr1:79636861-79636583 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 187 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 12-533 |
Cow position: | chr1:82355790-82356305 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 354 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 260, 46 |
Conread position: | 13-205 |
Cow position: | chr1:69287497-69287307 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 141 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 104, 93 |
Conread position: | 13-224 |
Cow position: | chr1:55276415-55276203 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 145 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 13-225 |
Cow position: | chr1:87207357-87207145 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 146 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 177, 172 |
Conread position: | 13-230 |
Cow position: | chr1:89899631-89899417 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 149 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 200, 64 |
Conread position: | 13-230 |
Cow position: | chr1:95239440-95239657 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 152 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-239 |
Cow position: | chr1:40308133-40308354 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 158 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 13-239 |
Cow position: | chr1:56489911-56490137 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 154 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-242 |
Cow position: | chr1:33851349-33851577 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 159 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-242 |
Cow position: | chr1:45097767-45097994 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 155 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 200, 174 |
Conread position: | 13-243 |
Cow position: | chr1:42290458-42290683 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 155 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 13-251 |
Cow position: | chr1:8554399-8554637 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-251 |
Cow position: | chr1:20828960-20829198 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 164 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-251 |
Cow position: | chr1:28710987-28711225 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 88, 80 |
Conread position: | 13-251 |
Cow position: | chr1:30027476-30027243 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 162 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 16, 90 |
Conread position: | 13-251 |
Cow position: | chr1:30283471-30283234 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 162 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 13-251 |
Cow position: | chr1:40053426-40053664 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 163 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr1:40684620-40684382 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 83, 100 |
Conread position: | 13-251 |
Cow position: | chr1:55322986-55322749 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 158 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 13-251 |
Cow position: | chr1:60339376-60339614 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 163 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-251 |
Cow position: | chr1:61309073-61309311 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 166 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr1:62925684-62925922 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 164 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-251 |
Cow position: | chr1:69766533-69766771 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 161 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr1:80359108-80358872 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 13-251 |
Cow position: | chr1:82564574-82564812 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 161 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-251 |
Cow position: | chr1:91899069-91899305 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 167 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 83, 39 |
Conread position: | 13-252 |
Cow position: | chr1:72136710-72136949 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-266 |
Cow position: | chr1:13645784-13646035 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 173 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 228, 123 |
Conread position: | 13-271 |
Cow position: | chr1:82918591-82918338 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 177 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 13-272 |
Cow position: | chr1:25179960-25179703 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 174 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 230, 0 |
Conread position: | 13-272 |
Cow position: | chr1:101857913-101857659 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 175 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 13-279 |
Cow position: | chr1:101149903-101150169 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 188 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 177, 172 |
Conread position: | 13-297 |
Cow position: | chr1:29362367-29362648 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 188 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-307 |
Cow position: | chr1:52233045-52232754 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 204 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 251, 245 |
Conread position: | 15-294 |
Cow position: | chr1:44138272-44137998 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 199 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 16-222 |
Cow position: | chr1:40953976-40954181 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 137 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 16-242 |
Cow position: | chr1:88635445-88635670 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 155 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 79, 94 |
Conread position: | 16-251 |
Cow position: | chr1:21087487-21087722 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 160 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 80, 91 |
Conread position: | 16-251 |
Cow position: | chr1:21356564-21356342 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 72, 144 |
Conread position: | 16-251 |
Cow position: | chr1:31396764-31396999 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 161 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 80, 91 |
Conread position: | 16-251 |
Cow position: | chr1:82652727-82652962 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 163 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 80, 91 |
Conread position: | 16-251 |
Cow position: | chr1:82913070-82912835 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 162 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 80, 91 |
Conread position: | 16-258 |
Cow position: | chr1:25887091-25886848 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 161 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 66, 152 |
Conread position: | 16-266 |
Cow position: | chr1:1461257-1461009 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 168 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 82, 56 |
Conread position: | 16-266 |
Cow position: | chr1:72657060-72657310 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 168 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 232, 246 |
Conread position: | 16-269 |
Cow position: | chr1:33712137-33712390 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 181 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 84, 92 |
Conread position: | 16-287 |
Cow position: | chr1:39481909-39481639 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 0 |
Conread position: | 16-306 |
Cow position: | chr1:19992609-19992328 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 210 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 262, 133 |
Conread position: | 16-514 |
Cow position: | chr1:63501527-63502024 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 329 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 256, 171 |
Conread position: | 16-519 |
Cow position: | chr1:80555998-80555517 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 333 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 279, 48 |
Conread position: | 17-268 |
Cow position: | chr1:54365749-54365507 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 167 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 17-461 |
Cow position: | chr1:99375035-99375474 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 296 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 79, 105 |
Conread position: | 22-272 |
Cow position: | chr1:79456893-79456644 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 177 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 221, 0 |
Conread position: | 22-272 |
Cow position: | chr1:100597294-100597046 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 163 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 221, 0 |
Conread position: | 24-540 |
Cow position: | chr1:38396310-38396792 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 124 |
Conread position: | 156-540 |
Cow position: | chr1:31422066-31421705 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 50 |
Conread position: | 350-540 |
Cow position: | chr1:44137649-44137471 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 137 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.