Cow genome map

Conread name: Ss1.1-Pig3-SRG8011E01.5

Conread position: 11-251
Cow position: chr17:228399-228164 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 12-230
Cow position: chr17:2248678-2248461 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 40

Conread position: 12-238
Cow position: chr17:4060007-4060230 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 148, 93

Conread position: 12-256
Cow position: chr17:15157058-15156815 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 84, 94

Conread position: 12-271
Cow position: chr17:6259750-6260006 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 12-271
Cow position: chr17:25737568-25737826 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 231, 0

Conread position: 12-297
Cow position: chr17:2262014-2262289 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 14

Conread position: 13-220
Cow position: chr17:20183324-20183118 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 13-227
Cow position: chr17:2556029-2556242 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 13-230
Cow position: chr17:181269-181486 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 94

Conread position: 13-230
Cow position: chr17:16890025-16890247 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 13-239
Cow position: chr17:9653550-9653324 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 13-242
Cow position: chr17:1382908-1382679 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 13-242
Cow position: chr17:15435697-15435926 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 94

Conread position: 13-242
Cow position: chr17:35592119-35592349 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 177, 0

Conread position: 13-242
Cow position: chr17:44853026-44852798 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 196, 0

Conread position: 13-251
Cow position: chr17:6089255-6089017 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 13-251
Cow position: chr17:8209012-8209250 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 94

Conread position: 13-251
Cow position: chr17:14217118-14216882 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 217

Conread position: 13-251
Cow position: chr17:20665820-20665582 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 100

Conread position: 13-251
Cow position: chr17:24633860-24634098 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-251
Cow position: chr17:43988443-43988677 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 83, 63

Conread position: 13-256
Cow position: chr17:15143461-15143218 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 100

Conread position: 13-259
Cow position: chr17:27345708-27345951 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 236, 36

Conread position: 13-266
Cow position: chr17:1946882-1947128 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 235, 69

Conread position: 13-266
Cow position: chr17:18026851-18026600 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 230, 0

Conread position: 13-266
Cow position: chr17:18185627-18185376 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 163

Conread position: 13-271
Cow position: chr17:23857129-23856872 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 231

Conread position: 16-243
Cow position: chr17:6075701-6075922 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 16-251
Cow position: chr17:23324545-23324310 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 16-266
Cow position: chr17:22132140-22132387 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 232, 42

Conread position: 16-272
Cow position: chr17:14894070-14894317 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 138-536
Cow position: chr17:15383922-15384294 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 161, 87

Show alignments to all cow chromosomes.