Cow genome map
Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
Conread position: | 10-266 |
Cow position: | chr2:82167166-82167420 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 176 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 233, 0 |
Conread position: | 10-430 |
Cow position: | chr2:43959163-43959589 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 293 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 245, 143 |
Conread position: | 11-155 |
Cow position: | chr2:52173767-52173624 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 11-279 |
Cow position: | chr2:44106551-44106283 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 181 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 237, 251 |
Conread position: | 11-420 |
Cow position: | chr2:15580426-15580030 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 64 |
Conread position: | 12-205 |
Cow position: | chr2:10729996-10729806 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 135 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 181, 8 |
Conread position: | 12-242 |
Cow position: | chr2:41172238-41172467 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 12-251 |
Cow position: | chr2:6960305-6960545 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 157 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 137, 100 |
Conread position: | 12-251 |
Cow position: | chr2:59414121-59413882 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-251 |
Cow position: | chr2:72108972-72108747 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 174 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 43, 146 |
Conread position: | 12-255 |
Cow position: | chr2:41686075-41686319 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 167 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 84, 95 |
Conread position: | 12-255 |
Cow position: | chr2:52616032-52616275 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 84, 92 |
Conread position: | 12-266 |
Cow position: | chr2:3749466-3749730 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 183 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 85, 106 |
Conread position: | 12-268 |
Cow position: | chr2:10269101-10268843 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 237, 0 |
Conread position: | 12-271 |
Cow position: | chr2:44935528-44935271 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 179 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 84, 92 |
Conread position: | 12-272 |
Cow position: | chr2:10186674-10186415 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 176 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 231, 0 |
Conread position: | 12-272 |
Cow position: | chr2:24921958-24922218 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 179 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 201, 232 |
Conread position: | 12-457 |
Cow position: | chr2:11691743-11692186 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 101 |
Conread position: | 12-539 |
Cow position: | chr2:77208204-77208740 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 147 |
Conread position: | 13-223 |
Cow position: | chr2:57334757-57334967 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-239 |
Cow position: | chr2:49604276-49604502 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 148 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-242 |
Cow position: | chr2:4404787-4404559 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 160 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr2:1673106-1672869 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 157 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 13-251 |
Cow position: | chr2:2184696-2184458 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 171 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr2:9907473-9907711 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 159 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-251 |
Cow position: | chr2:25030915-25030678 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr2:41656643-41656880 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 159 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr2:47038852-47038616 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 161 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-251 |
Cow position: | chr2:49471807-49472045 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 133, 137 |
Conread position: | 13-251 |
Cow position: | chr2:57142126-57141888 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 160 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-251 |
Cow position: | chr2:80956076-80955838 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 161 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-258 |
Cow position: | chr2:36054093-36053848 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 160 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 21, 101 |
Conread position: | 13-266 |
Cow position: | chr2:2101910-2101659 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 167 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 215, 0 |
Conread position: | 13-266 |
Cow position: | chr2:5481106-5480857 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 170 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 87, 23 |
Conread position: | 13-266 |
Cow position: | chr2:10711876-10711623 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 172 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 225, 216 |
Conread position: | 13-266 |
Cow position: | chr2:72922271-72922018 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 170 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 206, 196 |
Conread position: | 13-267 |
Cow position: | chr2:46946228-46946481 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 168 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 83, 91 |
Conread position: | 13-271 |
Cow position: | chr2:2363744-2364000 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 175 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 83, 94 |
Conread position: | 13-487 |
Cow position: | chr2:45968792-45968327 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 133 |
Conread position: | 13-509 |
Cow position: | chr2:45921698-45921213 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 89 |
Conread position: | 16-224 |
Cow position: | chr2:290268-290062 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 128, 134 |
Conread position: | 16-230 |
Cow position: | chr2:44346279-44346493 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 150 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-230 |
Cow position: | chr2:78741693-78741910 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 151 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 76, 94 |
Conread position: | 16-244 |
Cow position: | chr2:14560749-14560971 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 158 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 135, 154 |
Conread position: | 16-251 |
Cow position: | chr2:26868833-26869065 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 159 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 16-255 |
Cow position: | chr2:175965-175725 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 162 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 80, 91 |
Conread position: | 16-258 |
Cow position: | chr2:50321842-50322086 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 167 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 81, 21 |
Conread position: | 16-266 |
Cow position: | chr2:6772608-6772361 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 167 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 190, 160 |
Conread position: | 16-272 |
Cow position: | chr2:19009796-19010049 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 172 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 174, 108 |
Conread position: | 16-277 |
Cow position: | chr2:32654898-32655162 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 171 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 186, 0 |
Conread position: | 17-242 |
Cow position: | chr2:16076732-16076507 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 151 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 36, 144 |
Conread position: | 17-251 |
Cow position: | chr2:51990966-51990732 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 159 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-258 |
Cow position: | chr2:20874611-20874375 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 170 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 17-455 |
Cow position: | chr2:36991454-36991896 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 285 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 209, 40 |
Conread position: | 21-230 |
Cow position: | chr2:14822069-14822278 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-271 |
Cow position: | chr2:53329315-53329564 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 245, 221 |
Conread position: | 23-230 |
Cow position: | chr2:67419729-67419522 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 145 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 73, 84 |
Conread position: | 24-272 |
Cow position: | chr2:65938878-65938633 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 167 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 25-271 |
Cow position: | chr2:59963657-59963409 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 79, 39 |
Conread position: | 30-251 |
Cow position: | chr2:5474093-5474314 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 148 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 37-251 |
Cow position: | chr2:2088589-2088375 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 149 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 59, 127 |
Conread position: | 49-272 |
Cow position: | chr2:13046109-13045888 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 172, 0 |
Conread position: | 57-540 |
Cow position: | chr2:63977520-63977997 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 60 |
Show alignments to all cow chromosomes.