Cow genome map

Conread name: Ss1.1-Pig3-SRG8011E01.5

Conread position: 10-266
Cow position: chr2:82167166-82167420 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 233, 0

Conread position: 10-430
Cow position: chr2:43959163-43959589 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 293
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 245, 143

Conread position: 11-155
Cow position: chr2:52173767-52173624 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 11-279
Cow position: chr2:44106551-44106283 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 237, 251

Conread position: 11-420
Cow position: chr2:15580426-15580030 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 64

Conread position: 12-205
Cow position: chr2:10729996-10729806 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 181, 8

Conread position: 12-242
Cow position: chr2:41172238-41172467 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 0

Conread position: 12-251
Cow position: chr2:6960305-6960545 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 100

Conread position: 12-251
Cow position: chr2:59414121-59413882 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-251
Cow position: chr2:72108972-72108747 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 146

Conread position: 12-255
Cow position: chr2:41686075-41686319 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 95

Conread position: 12-255
Cow position: chr2:52616032-52616275 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 92

Conread position: 12-266
Cow position: chr2:3749466-3749730 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 106

Conread position: 12-268
Cow position: chr2:10269101-10268843 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 237, 0

Conread position: 12-271
Cow position: chr2:44935528-44935271 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 92

Conread position: 12-272
Cow position: chr2:10186674-10186415 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 231, 0

Conread position: 12-272
Cow position: chr2:24921958-24922218 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 201, 232

Conread position: 12-457
Cow position: chr2:11691743-11692186 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 101

Conread position: 12-539
Cow position: chr2:77208204-77208740 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 147

Conread position: 13-223
Cow position: chr2:57334757-57334967 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-239
Cow position: chr2:49604276-49604502 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 13-242
Cow position: chr2:4404787-4404559 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 94

Conread position: 13-251
Cow position: chr2:1673106-1672869 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 13-251
Cow position: chr2:2184696-2184458 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 83, 94

Conread position: 13-251
Cow position: chr2:9907473-9907711 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 13-251
Cow position: chr2:25030915-25030678 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 94

Conread position: 13-251
Cow position: chr2:41656643-41656880 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 94

Conread position: 13-251
Cow position: chr2:47038852-47038616 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 94

Conread position: 13-251
Cow position: chr2:49471807-49472045 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 133, 137

Conread position: 13-251
Cow position: chr2:57142126-57141888 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 13-251
Cow position: chr2:80956076-80955838 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-258
Cow position: chr2:36054093-36053848 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 101

Conread position: 13-266
Cow position: chr2:2101910-2101659 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 215, 0

Conread position: 13-266
Cow position: chr2:5481106-5480857 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 23

Conread position: 13-266
Cow position: chr2:10711876-10711623 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 225, 216

Conread position: 13-266
Cow position: chr2:72922271-72922018 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 206, 196

Conread position: 13-267
Cow position: chr2:46946228-46946481 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 91

Conread position: 13-271
Cow position: chr2:2363744-2364000 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 94

Conread position: 13-487
Cow position: chr2:45968792-45968327 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 133

Conread position: 13-509
Cow position: chr2:45921698-45921213 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 89

Conread position: 16-224
Cow position: chr2:290268-290062 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 134

Conread position: 16-230
Cow position: chr2:44346279-44346493 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 16-230
Cow position: chr2:78741693-78741910 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 76, 94

Conread position: 16-244
Cow position: chr2:14560749-14560971 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 154

Conread position: 16-251
Cow position: chr2:26868833-26869065 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 16-255
Cow position: chr2:175965-175725 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 80, 91

Conread position: 16-258
Cow position: chr2:50321842-50322086 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 21

Conread position: 16-266
Cow position: chr2:6772608-6772361 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 190, 160

Conread position: 16-272
Cow position: chr2:19009796-19010049 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 174, 108

Conread position: 16-277
Cow position: chr2:32654898-32655162 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 186, 0

Conread position: 17-242
Cow position: chr2:16076732-16076507 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 144

Conread position: 17-251
Cow position: chr2:51990966-51990732 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 17-258
Cow position: chr2:20874611-20874375 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 17-455
Cow position: chr2:36991454-36991896 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 285
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 209, 40

Conread position: 21-230
Cow position: chr2:14822069-14822278 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 22-271
Cow position: chr2:53329315-53329564 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 245, 221

Conread position: 23-230
Cow position: chr2:67419729-67419522 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 73, 84

Conread position: 24-272
Cow position: chr2:65938878-65938633 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 25-271
Cow position: chr2:59963657-59963409 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 39

Conread position: 30-251
Cow position: chr2:5474093-5474314 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 37-251
Cow position: chr2:2088589-2088375 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 127

Conread position: 49-272
Cow position: chr2:13046109-13045888 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 172, 0

Conread position: 57-540
Cow position: chr2:63977520-63977997 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 60

Show alignments to all cow chromosomes.