Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
| Conread position: | 11-230 |
| Cow position: | chr20:28463550-28463766 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 12-273 |
| Cow position: | chr20:8004151-8003892 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-227 |
| Cow position: | chr20:24614609-24614824 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 13-230 |
| Cow position: | chr20:3684410-3684196 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 13-251 |
| Cow position: | chr20:822842-823080 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 83, 94 |
| Conread position: | 13-251 |
| Cow position: | chr20:5560640-5560402 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-251 |
| Cow position: | chr20:25961178-25961416 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-269 |
| Cow position: | chr20:3033136-3033391 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 13-271 |
| Cow position: | chr20:3252059-3251804 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 13-272 |
| Cow position: | chr20:15064843-15065097 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 118, 15 |
| Conread position: | 16-195 |
| Cow position: | chr20:19367511-19367332 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 114 |
| Conread position: | 16-230 |
| Cow position: | chr20:5484267-5484482 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 16-239 |
| Cow position: | chr20:3270782-3271005 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 174, 144 |
| Conread position: | 16-269 |
| Cow position: | chr20:29948577-29948828 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 72, 88 |
| Conread position: | 17-267 |
| Cow position: | chr20:8993566-8993323 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 219, 152 |
| Conread position: | 35-271 |
| Cow position: | chr20:15947281-15947050 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 111-311 |
| Cow position: | chr20:24517855-24518050 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 184, 98 |
Show alignments to all cow chromosomes.