Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
| Conread position: | 11-209 |
| Cow position: | chr23:22945046-22944856 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 45 |
| Conread position: | 11-251 |
| Cow position: | chr23:4434479-4434715 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 11-516 |
| Cow position: | chr23:6216592-6217115 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 11 |
| Conread position: | 12-230 |
| Cow position: | chr23:25684041-25683826 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 12-251 |
| Cow position: | chr23:19950563-19950324 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 134, 138 |
| Conread position: | 12-251 |
| Cow position: | chr23:20302233-20302471 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 12-251 |
| Cow position: | chr23:28217310-28217549 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 12-272 |
| Cow position: | chr23:15525630-15525889 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 235, 0 |
| Conread position: | 13-209 |
| Cow position: | chr23:2524176-2523980 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-224 |
| Cow position: | chr23:31595215-31595004 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 13-240 |
| Cow position: | chr23:4276975-4277203 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-251 |
| Cow position: | chr23:2313217-2312981 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 13-251 |
| Cow position: | chr23:4359851-4360089 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-251 |
| Cow position: | chr23:31446836-31447074 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-281 |
| Cow position: | chr23:31591782-31591508 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 16-440 |
| Cow position: | chr23:19450280-19450696 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 154, 44 |
| Conread position: | 17-254 |
| Cow position: | chr23:36211102-36210856 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 79, 190 |
| Conread position: | 17-271 |
| Cow position: | chr23:5779062-5778810 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 18-255 |
| Cow position: | chr23:16615970-16615736 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 70, 87 |
| Conread position: | 18-540 |
| Cow position: | chr23:26836305-26836813 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 122 |
| Conread position: | 22-256 |
| Cow position: | chr23:15219862-15219626 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 24-266 |
| Cow position: | chr23:8980286-8980048 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 24-540 |
| Cow position: | chr23:13509090-13509582 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 90 |
| Conread position: | 41-271 |
| Cow position: | chr23:1327425-1327190 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 54-266 |
| Cow position: | chr23:29452258-29452043 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 60-293 |
| Cow position: | chr23:3863015-3863246 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.