Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
| Conread position: | 11-540 |
| Cow position: | chr24:14873248-14872748 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 224 |
| Conread position: | 12-251 |
| Cow position: | chr24:6084123-6084362 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 12-256 |
| Cow position: | chr24:16649212-16648967 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 12-433 |
| Cow position: | chr24:40654492-40654930 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 109, 128 |
| Conread position: | 13-196 |
| Cow position: | chr24:12797661-12797478 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 94 |
| Conread position: | 13-209 |
| Cow position: | chr24:44017653-44017849 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-224 |
| Cow position: | chr24:12485210-12484999 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-239 |
| Cow position: | chr24:36559979-36559754 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 45 |
| Conread position: | 13-251 |
| Cow position: | chr24:6024988-6024753 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 152, 99 |
| Conread position: | 13-251 |
| Cow position: | chr24:8030258-8030496 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-251 |
| Cow position: | chr24:9188624-9188387 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 13-251 |
| Cow position: | chr24:33739230-33738995 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 94 |
| Conread position: | 13-251 |
| Cow position: | chr24:35841516-35841278 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 112 |
| Conread position: | 13-286 |
| Cow position: | chr24:35838509-35838237 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 16-255 |
| Cow position: | chr24:36707957-36708195 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 16-269 |
| Cow position: | chr24:14585192-14585442 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 228, 24 |
| Conread position: | 16-298 |
| Cow position: | chr24:6145479-6145759 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 16-497 |
| Cow position: | chr24:6510722-6510240 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 236 |
| Conread position: | 17-271 |
| Cow position: | chr24:7091486-7091230 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 153 |
| Conread position: | 19-202 |
| Cow position: | chr24:13524218-13524399 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 24-275 |
| Cow position: | chr24:1438068-1437821 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 34-243 |
| Cow position: | chr24:1447684-1447891 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 145, 120 |
| Conread position: | 56-245 |
| Cow position: | chr24:7061539-7061728 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-536 |
| Cow position: | chr24:6048630-6048825 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 130, 24 |
Show alignments to all cow chromosomes.