Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
| Conread position: | 10-519 |
| Cow position: | chr25:20494418-20494906 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 337 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 233, 54 |
| Conread position: | 11-223 |
| Cow position: | chr25:24218057-24217847 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 123, 65 |
| Conread position: | 11-252 |
| Cow position: | chr25:18255305-18255070 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 12-251 |
| Cow position: | chr25:18195036-18194797 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 12-251 |
| Cow position: | chr25:19917146-19917385 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 12-251 |
| Cow position: | chr25:27022504-27022265 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-536 |
| Cow position: | chr25:3378695-3378159 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 101 |
| Conread position: | 13-250 |
| Cow position: | chr25:36240619-36240849 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 13-251 |
| Cow position: | chr25:17589485-17589253 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 13-251 |
| Cow position: | chr25:32580029-32580266 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 13-259 |
| Cow position: | chr25:12759536-12759292 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 176 |
| Conread position: | 13-266 |
| Cow position: | chr25:17468635-17468386 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 149, 174 |
| Conread position: | 16-260 |
| Cow position: | chr25:18275767-18275517 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 80, 88 |
| Conread position: | 16-272 |
| Cow position: | chr25:12942634-12942379 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 18-266 |
| Cow position: | chr25:14016233-14016481 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 134, 106 |
| Conread position: | 22-269 |
| Cow position: | chr25:19288266-19288025 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 223, 42 |
| Conread position: | 23-251 |
| Cow position: | chr25:35362356-35362128 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-269 |
| Cow position: | chr25:18060521-18060284 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 41-303 |
| Cow position: | chr25:11933438-11933180 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 23 |
Show alignments to all cow chromosomes.