Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8011E01.5
        

               Conread position:
               12-305
               

               Cow position:
               chr27:6013450-6013734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               184, 53
               

               Conread position:
               13-239
               

               Cow position:
               chr27:15278048-15277826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               13-242
               

               Cow position:
               chr27:27051698-27051934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               116, 51
               

               Conread position:
               13-251
               

               Cow position:
               chr27:15541350-15541588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-251
               

               Cow position:
               chr27:16034373-16034135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               83, 94
               

               Conread position:
               13-256
               

               Cow position:
               chr27:26555983-26555740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               235, 208
               

               Conread position:
               13-266
               

               Cow position:
               chr27:16439346-16439600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 160
               

               Conread position:
               16-209
               

               Cow position:
               chr27:2364774-2364968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 91
               

               Conread position:
               16-297
               

               Cow position:
               chr27:27753172-27752894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               257, 0
               

               Conread position:
               20-266
               

               Cow position:
               chr27:25002508-25002261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               198, 243
               
Show alignments to all cow chromosomes.