Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
| Conread position: | 11-250 |
| Cow position: | chr28:22065677-22065443 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 11-292 |
| Cow position: | chr28:18181086-18180813 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 12-243 |
| Cow position: | chr28:5378531-5378757 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 132, 12 |
| Conread position: | 12-251 |
| Cow position: | chr28:7822322-7822561 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 12-279 |
| Cow position: | chr28:1504916-1505180 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 12-279 |
| Cow position: | chr28:18520399-18520129 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 235 |
| Conread position: | 12-286 |
| Cow position: | chr28:8721383-8721110 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 243, 128 |
| Conread position: | 12-539 |
| Cow position: | chr28:17312009-17312531 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 91 |
| Conread position: | 13-207 |
| Cow position: | chr28:2724825-2724631 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-242 |
| Cow position: | chr28:7901420-7901656 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 13-251 |
| Cow position: | chr28:13440811-13440573 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-251 |
| Cow position: | chr28:14750613-14750850 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 13-266 |
| Cow position: | chr28:4380779-4380526 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 80, 94 |
| Conread position: | 13-266 |
| Cow position: | chr28:9954198-9954451 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 147, 157 |
| Conread position: | 13-271 |
| Cow position: | chr28:9136985-9136730 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 177, 104 |
| Conread position: | 16-230 |
| Cow position: | chr28:1931916-1931702 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 80, 91 |
| Conread position: | 16-251 |
| Cow position: | chr28:6780265-6780030 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-266 |
| Cow position: | chr28:24667647-24667896 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 61, 194 |
| Conread position: | 16-540 |
| Cow position: | chr28:5800692-5801182 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 17-209 |
| Cow position: | chr28:18101874-18101684 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 18-295 |
| Cow position: | chr28:7790216-7789936 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 20-242 |
| Cow position: | chr28:9155207-9154991 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 22-230 |
| Cow position: | chr28:5114737-5114529 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-272 |
| Cow position: | chr28:12150389-12150626 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 41-252 |
| Cow position: | chr28:34649037-34649248 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 144, 62 |
| Conread position: | 42-272 |
| Cow position: | chr28:17388576-17388806 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 207, 220 |
| Conread position: | 48-251 |
| Cow position: | chr28:29437198-29436981 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 212-536 |
| Cow position: | chr28:29436994-29436677 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 285-540 |
| Cow position: | chr28:10230282-10230024 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 54 |
Show alignments to all cow chromosomes.