Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
| Conread position: | 10-540 |
| Cow position: | chr29:8062871-8062331 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 242 |
| Conread position: | 12-251 |
| Cow position: | chr29:610582-610343 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 12-251 |
| Cow position: | chr29:13582102-13582337 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 92 |
| Conread position: | 12-255 |
| Cow position: | chr29:4056179-4056423 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 12-268 |
| Cow position: | chr29:9643728-9643467 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 12-272 |
| Cow position: | chr29:7431185-7430930 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 12-272 |
| Cow position: | chr29:16022560-16022819 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 12-272 |
| Cow position: | chr29:20251190-20251448 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 12-464 |
| Cow position: | chr29:16017120-16016686 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 112 |
| Conread position: | 13-244 |
| Cow position: | chr29:15894819-15894588 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-251 |
| Cow position: | chr29:18856913-18856675 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-251 |
| Cow position: | chr29:27250303-27250073 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-251 |
| Cow position: | chr29:27980886-27980650 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 13-251 |
| Cow position: | chr29:34925505-34925748 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 13-251 |
| Cow position: | chr29:35296905-35297143 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 13-266 |
| Cow position: | chr29:27040733-27040488 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 55 |
| Conread position: | 13-266 |
| Cow position: | chr29:35196698-35196948 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 235, 99 |
| Conread position: | 13-271 |
| Cow position: | chr29:104599-104853 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 13-272 |
| Cow position: | chr29:19653139-19653397 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 230, 0 |
| Conread position: | 14-230 |
| Cow position: | chr29:22966224-22966012 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 16 |
| Conread position: | 16-243 |
| Cow position: | chr29:14013502-14013724 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 16-243 |
| Cow position: | chr29:14072909-14072687 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 16-251 |
| Cow position: | chr29:19885104-19885339 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 80, 91 |
| Conread position: | 16-266 |
| Cow position: | chr29:11049313-11049562 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 232, 70 |
| Conread position: | 19-266 |
| Cow position: | chr29:16770160-16770406 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 85 |
| Conread position: | 19-266 |
| Cow position: | chr29:21543331-21543085 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 216, 52 |
| Conread position: | 105-271 |
| Cow position: | chr29:19906757-19906922 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 151, 138 |
Show alignments to all cow chromosomes.