Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8011E01.5
        

               Conread position:
               11-230
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               11-253
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               11-266
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               237, 165
               

               Conread position:
               11-279
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               220, 139
               

               Conread position:
               11-293
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               149, 49
               

               Conread position:
               12-219
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               12-251
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               12-251
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               84, 95
               

               Conread position:
               12-251
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               84, 95
               

               Conread position:
               12-251
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               12-269
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               84, 95
               

               Conread position:
               12-297
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               12-539
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 10
               

               Conread position:
               13-199
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               13-206
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-208
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-224
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               13-230
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               13-239
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 100
               

               Conread position:
               13-242
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-251
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               147, 99
               

               Conread position:
               13-251
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               136, 129
               

               Conread position:
               13-251
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               83, 72
               

               Conread position:
               13-255
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               147, 151
               

               Conread position:
               13-256
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               13-259
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 98
               

               Conread position:
               13-264
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               235, 171
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 173
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               235, 249
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               235, 249
               

               Conread position:
               13-269
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               249, 51
               

               Conread position:
               13-287
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               13-297
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               13-307
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               246, 0
               

               Conread position:
               16-230
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               80, 69
               

               Conread position:
               16-251
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 91
               

               Conread position:
               16-251
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               16-266
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               232, 169
               

               Conread position:
               16-540
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               17-251
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-266
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               225, 191
               

               Conread position:
               18-540
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 120
               

               Conread position:
               19-152
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               19-242
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               23-181
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               23-230
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-271
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               30-230
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 134
               

               Conread position:
               49-240
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 58
               

               Conread position:
               57-518
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 29
               

               Conread position:
               110-540
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 51
               

               Conread position:
               297-525
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               136, 29
               

               Conread position:
               350-540
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               122, 0
               
Show alignments to all cow chromosomes.