Cow genome map

Conread name: Ss1.1-Pig3-SRG8011E01.5

Conread position: 11-145
Cow position: chr4:24198462-24198328 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 11-164
Cow position: chr4:496205-496053 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 11-251
Cow position: chr4:16056354-16056593 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 85, 59

Conread position: 11-518
Cow position: chr4:22471923-22472422 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 334
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 7

Conread position: 11-540
Cow position: chr4:1497007-1496495 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 236

Conread position: 11-540
Cow position: chr4:4176181-4176702 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 198

Conread position: 12-177
Cow position: chr4:6214805-6214641 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 12-207
Cow position: chr4:3830234-3830423 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 12-224
Cow position: chr4:18424772-18424560 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 84, 95

Conread position: 12-251
Cow position: chr4:27333197-27333427 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 12-272
Cow position: chr4:44724836-44725095 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 231, 0

Conread position: 13-208
Cow position: chr4:39272186-39271988 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 171

Conread position: 13-224
Cow position: chr4:6268874-6268665 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 94

Conread position: 13-242
Cow position: chr4:47764416-47764188 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 13-251
Cow position: chr4:101179-100941 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 83, 100

Conread position: 13-251
Cow position: chr4:602747-602985 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 94

Conread position: 13-251
Cow position: chr4:9355017-9354779 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 13-251
Cow position: chr4:13547783-13548021 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 13-251
Cow position: chr4:32211921-32212159 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 83, 97

Conread position: 13-251
Cow position: chr4:65223780-65223542 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 13-266
Cow position: chr4:66179234-66178983 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 230, 0

Conread position: 13-271
Cow position: chr4:12241465-12241207 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 231

Conread position: 13-272
Cow position: chr4:43319882-43319635 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 177, 51

Conread position: 13-286
Cow position: chr4:66925753-66926027 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 147, 123

Conread position: 13-462
Cow position: chr4:40824499-40824041 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 301
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 223, 213

Conread position: 16-209
Cow position: chr4:11618610-11618803 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 16-251
Cow position: chr4:9587020-9587255 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 16-266
Cow position: chr4:61256653-61256898 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 232, 101

Conread position: 16-271
Cow position: chr4:17530671-17530417 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 231, 80

Conread position: 16-540
Cow position: chr4:969287-968754 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 81

Conread position: 17-250
Cow position: chr4:28830786-28831020 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 17-251
Cow position: chr4:1930866-1930632 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 90

Conread position: 18-261
Cow position: chr4:62565742-62565985 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 196, 113

Conread position: 28-306
Cow position: chr4:54157768-54158039 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 267, 130

Conread position: 54-297
Cow position: chr4:17382635-17382399 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 218, 14

Conread position: 297-540
Cow position: chr4:32622025-32622253 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.