Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E01.5 |
| Conread position: | 1-255 |
| Cow position: | chr8:13808857-13809105 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 10-243 |
| Cow position: | chr8:46633130-46632900 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 150, 8 |
| Conread position: | 10-450 |
| Cow position: | chr8:9135635-9135190 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 275, 68 |
| Conread position: | 11-216 |
| Cow position: | chr8:24876448-24876251 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 11-269 |
| Cow position: | chr8:47491567-47491310 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 80, 176 |
| Conread position: | 11-302 |
| Cow position: | chr8:15687893-15687604 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 85, 99 |
| Conread position: | 12-222 |
| Cow position: | chr8:8910487-8910697 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-227 |
| Cow position: | chr8:9540227-9540015 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 12-237 |
| Cow position: | chr8:26005331-26005107 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 84, 98 |
| Conread position: | 12-246 |
| Cow position: | chr8:8556882-8556648 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-251 |
| Cow position: | chr8:1319311-1319550 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 12-251 |
| Cow position: | chr8:21158550-21158313 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 12-266 |
| Cow position: | chr8:11821579-11821832 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 232, 193 |
| Conread position: | 12-266 |
| Cow position: | chr8:46944653-46944399 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 12-270 |
| Cow position: | chr8:39195949-39195694 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 12-504 |
| Cow position: | chr8:51327836-51328323 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 240 |
| Conread position: | 13-131 |
| Cow position: | chr8:53427588-53427706 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 13-242 |
| Cow position: | chr8:45316858-45316629 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 13-251 |
| Cow position: | chr8:6065501-6065263 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 94 |
| Conread position: | 13-251 |
| Cow position: | chr8:9275279-9275516 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 13-251 |
| Cow position: | chr8:9735514-9735752 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 83, 94 |
| Conread position: | 13-251 |
| Cow position: | chr8:10748642-10748880 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 83, 94 |
| Conread position: | 13-251 |
| Cow position: | chr8:22572029-22571790 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 13-251 |
| Cow position: | chr8:47069539-47069300 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 80, 95 |
| Conread position: | 13-262 |
| Cow position: | chr8:45189355-45189602 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 13-266 |
| Cow position: | chr8:2171112-2170858 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 13-266 |
| Cow position: | chr8:32930778-32931030 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 235, 47 |
| Conread position: | 13-266 |
| Cow position: | chr8:44036510-44036258 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 147, 69 |
| Conread position: | 15-268 |
| Cow position: | chr8:45161106-45160853 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 116, 122 |
| Conread position: | 16-224 |
| Cow position: | chr8:27983525-27983319 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 16-230 |
| Cow position: | chr8:42759214-42759428 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-251 |
| Cow position: | chr8:2886021-2886256 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-251 |
| Cow position: | chr8:32631755-32631522 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 16-264 |
| Cow position: | chr8:47074540-47074786 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 16-266 |
| Cow position: | chr8:23217030-23217280 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 88 |
| Conread position: | 16-266 |
| Cow position: | chr8:27925587-27925836 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 232, 33 |
| Conread position: | 16-300 |
| Cow position: | chr8:33430191-33430479 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 252 |
| Conread position: | 17-206 |
| Cow position: | chr8:38578664-38578475 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-219 |
| Cow position: | chr8:23766127-23765929 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 18-256 |
| Cow position: | chr8:44665582-44665349 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 20-203 |
| Cow position: | chr8:21240461-21240641 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 174, 82 |
| Conread position: | 27-251 |
| Cow position: | chr8:27578683-27578907 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 69, 80 |
| Conread position: | 36-539 |
| Cow position: | chr8:19188120-19188631 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 338 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 194-540 |
| Cow position: | chr8:16084801-16085130 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 351-540 |
| Cow position: | chr8:38578162-38577976 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 361-529 |
| Cow position: | chr8:38586073-38585912 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 395-540 |
| Cow position: | chr8:24874872-24874726 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 45 |
Show alignments to all cow chromosomes.