Cow genome map

Conread name: Ss1.1-Pig3-SRG8011E05.5

Conread position: 234-504
Cow position: chr14:10078059-10078340 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 6, 40

Conread position: 246-489
Cow position: chr14:46977788-46977550 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 78

Conread position: 250-503
Cow position: chr14:2959344-2959595 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 49

Conread position: 258-476
Cow position: chr14:21557199-21556982 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 60

Conread position: 258-491
Cow position: chr14:41486441-41486203 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 183

Conread position: 258-497
Cow position: chr14:18301784-18302026 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 25, 75

Conread position: 258-502
Cow position: chr14:24236648-24236895 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 58

Conread position: 258-502
Cow position: chr14:26442518-26442273 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 181

Conread position: 258-504
Cow position: chr14:28923991-28924240 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 63

Conread position: 262-502
Cow position: chr14:20466767-20467000 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 53

Conread position: 262-503
Cow position: chr14:21933512-21933272 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 47

Conread position: 264-503
Cow position: chr14:18345890-18345661 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 56

Conread position: 264-503
Cow position: chr14:25225566-25225799 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 35

Conread position: 265-496
Cow position: chr14:11576904-11577132 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 60

Conread position: 265-503
Cow position: chr14:11643410-11643185 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 266-501
Cow position: chr14:36443181-36442949 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 53

Conread position: 266-502
Cow position: chr14:47170514-47170284 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 59

Conread position: 266-503
Cow position: chr14:39770384-39770163 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 267-471
Cow position: chr14:41156883-41156685 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 38

Conread position: 267-502
Cow position: chr14:4848187-4848417 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 32

Conread position: 267-502
Cow position: chr14:28115353-28115117 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 51

Conread position: 269-503
Cow position: chr14:21357396-21357627 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 45

Conread position: 269-503
Cow position: chr14:41749916-41749689 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 270-503
Cow position: chr14:29734524-29734293 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 27

Conread position: 270-504
Cow position: chr14:22988875-22989105 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 55

Conread position: 270-504
Cow position: chr14:29964857-29965091 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 74

Conread position: 271-441
Cow position: chr14:15228386-15228549 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 271-466
Cow position: chr14:47224531-47224332 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 177

Conread position: 271-503
Cow position: chr14:12033404-12033170 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 106

Conread position: 272-503
Cow position: chr14:15428320-15428549 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 42

Conread position: 272-503
Cow position: chr14:49824771-49824552 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 27

Conread position: 275-432
Cow position: chr14:36151169-36151325 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 39

Conread position: 275-488
Cow position: chr14:36775508-36775706 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 50

Conread position: 275-489
Cow position: chr14:15470141-15469925 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 102

Conread position: 275-502
Cow position: chr14:13845835-13846055 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 275-503
Cow position: chr14:4282665-4282438 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 41

Conread position: 275-503
Cow position: chr14:10706724-10706945 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 275-503
Cow position: chr14:10851872-10852101 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 45

Conread position: 275-503
Cow position: chr14:11729262-11729039 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 45

Conread position: 278-503
Cow position: chr14:13731249-13731027 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 42

Conread position: 281-465
Cow position: chr14:20736466-20736644 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 281-497
Cow position: chr14:9307918-9308130 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 15

Conread position: 281-498
Cow position: chr14:25227999-25228207 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 281-500
Cow position: chr14:16524321-16524541 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 15

Conread position: 281-500
Cow position: chr14:25903384-25903599 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 281-502
Cow position: chr14:20826343-20826560 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 281-503
Cow position: chr14:20640777-20640559 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 40

Conread position: 281-503
Cow position: chr14:33714822-33714608 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 63

Conread position: 281-504
Cow position: chr14:45677083-45677302 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 91, 32

Conread position: 282-504
Cow position: chr14:48426925-48427143 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 42

Conread position: 283-503
Cow position: chr14:20110866-20110651 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 283-503
Cow position: chr14:48838445-48838666 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 30

Conread position: 286-451
Cow position: chr14:11280256-11280094 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 38

Conread position: 287-502
Cow position: chr14:33791051-33791258 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 291-503
Cow position: chr14:26433387-26433170 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 91

Conread position: 298-451
Cow position: chr14:21530207-21530057 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 26

Conread position: 299-503
Cow position: chr14:40191459-40191656 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 109

Conread position: 302-503
Cow position: chr14:15492461-15492665 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 22

Conread position: 303-500
Cow position: chr14:1646315-1646118 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 14, 19

Conread position: 309-503
Cow position: chr14:5557241-5557050 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 316-502
Cow position: chr14:13042643-13042824 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 5

Conread position: 319-503
Cow position: chr14:34096677-34096496 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 9

Conread position: 321-489
Cow position: chr14:1431936-1431775 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 321-503
Cow position: chr14:16760287-16760470 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 165

Conread position: 321-504
Cow position: chr14:12924193-12924374 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 139, 26

Conread position: 323-501
Cow position: chr14:2541210-2541033 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 37

Conread position: 342-504
Cow position: chr14:38338223-38338062 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 343-502
Cow position: chr14:33751449-33751604 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 343-504
Cow position: chr14:45577181-45577020 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 348-503
Cow position: chr14:11975814-11975665 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 349-503
Cow position: chr14:3194783-3194927 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 349-504
Cow position: chr14:15055074-15054917 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 352-502
Cow position: chr14:24913794-24913946 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 352-502
Cow position: chr14:34199923-34199773 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 352-502
Cow position: chr14:40208816-40208968 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 352-503
Cow position: chr14:32371820-32371671 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 353-500
Cow position: chr14:19359808-19359957 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 353-503
Cow position: chr14:20349811-20349658 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 75

Conread position: 353-504
Cow position: chr14:24945571-24945419 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 355-503
Cow position: chr14:25333981-25334130 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 355-503
Cow position: chr14:27592033-27591886 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 360-503
Cow position: chr14:16256687-16256837 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 360-504
Cow position: chr14:19372267-19372411 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 361-496
Cow position: chr14:19487224-19487359 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 361-501
Cow position: chr14:41837943-41837803 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 361-502
Cow position: chr14:41210783-41210927 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 68

Conread position: 361-503
Cow position: chr14:5355095-5354954 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 361-503
Cow position: chr14:36254767-36254625 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 362-486
Cow position: chr14:40287522-40287646 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 362-503
Cow position: chr14:9308160-9308300 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 363-503
Cow position: chr14:35018822-35018682 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 364-503
Cow position: chr14:39778684-39778823 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 366-502
Cow position: chr14:29698427-29698288 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 128

Conread position: 367-495
Cow position: chr14:2833470-2833342 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 367-504
Cow position: chr14:15997830-15997693 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-504
Cow position: chr14:2038870-2038736 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-504
Cow position: chr14:33300642-33300775 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 396-503
Cow position: chr14:2345031-2345138 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.