Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E05.5 |
| Conread position: | 190-500 |
| Cow position: | chr17:25511557-25511261 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 203-503 |
| Cow position: | chr17:15102578-15102882 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 244-451 |
| Cow position: | chr17:20836358-20836155 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 246-504 |
| Cow position: | chr17:32471521-32471770 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 5, 40 |
| Conread position: | 251-468 |
| Cow position: | chr17:10016539-10016326 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 256-503 |
| Cow position: | chr17:24786766-24787011 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 258-433 |
| Cow position: | chr17:9260361-9260530 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 258-500 |
| Cow position: | chr17:24587877-24587639 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 258-502 |
| Cow position: | chr17:32138161-32138411 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 258-502 |
| Cow position: | chr17:36330713-36330944 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 258-503 |
| Cow position: | chr17:10458682-10458924 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 258-503 |
| Cow position: | chr17:24841951-24841707 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 262-416 |
| Cow position: | chr17:24612896-24612749 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 262-500 |
| Cow position: | chr17:25513867-25514107 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 263-504 |
| Cow position: | chr17:25473031-25473268 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 264-503 |
| Cow position: | chr17:26818223-26818445 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 265-474 |
| Cow position: | chr17:24895325-24895114 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 265-502 |
| Cow position: | chr17:30728755-30728518 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 265-503 |
| Cow position: | chr17:21114710-21114942 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 265-503 |
| Cow position: | chr17:24559540-24559302 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-503 |
| Cow position: | chr17:29084416-29084186 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 265-503 |
| Cow position: | chr17:32332844-32333080 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 266-472 |
| Cow position: | chr17:21677139-21676933 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 266-496 |
| Cow position: | chr17:21003585-21003807 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 266-497 |
| Cow position: | chr17:7959425-7959198 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 183, 58 |
| Conread position: | 267-432 |
| Cow position: | chr17:27606759-27606600 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 267-476 |
| Cow position: | chr17:21718751-21718958 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 267-497 |
| Cow position: | chr17:9824914-9824686 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 267-501 |
| Cow position: | chr17:33154912-33155140 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 268-502 |
| Cow position: | chr17:25616490-25616263 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 268-504 |
| Cow position: | chr17:6318624-6318855 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 172, 56 |
| Conread position: | 269-500 |
| Cow position: | chr17:21325588-21325347 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 269-500 |
| Cow position: | chr17:24824490-24824257 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 269-502 |
| Cow position: | chr17:34790821-34791054 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 269-503 |
| Cow position: | chr17:18934498-18934272 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 269-503 |
| Cow position: | chr17:24974187-24973953 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 269-503 |
| Cow position: | chr17:25800640-25800870 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 271-500 |
| Cow position: | chr17:4105750-4105978 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 271-502 |
| Cow position: | chr17:21039798-21039570 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 271-503 |
| Cow position: | chr17:11664335-11664573 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 271-503 |
| Cow position: | chr17:29995194-29995424 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 271-503 |
| Cow position: | chr17:32418875-32419104 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 272-416 |
| Cow position: | chr17:20782956-20783095 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 272-503 |
| Cow position: | chr17:3467992-3467765 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 272-503 |
| Cow position: | chr17:6423995-6423776 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 272-503 |
| Cow position: | chr17:25612328-25612102 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 273-501 |
| Cow position: | chr17:33288418-33288643 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 275-448 |
| Cow position: | chr17:20881578-20881742 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 275-471 |
| Cow position: | chr17:44234480-44234294 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 275-494 |
| Cow position: | chr17:1634256-1634471 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 275-501 |
| Cow position: | chr17:21466020-21466250 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 275-502 |
| Cow position: | chr17:1562553-1562767 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 275-502 |
| Cow position: | chr17:3153330-3153561 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 141 |
| Conread position: | 275-503 |
| Cow position: | chr17:17059656-17059437 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 275-503 |
| Cow position: | chr17:25126582-25126362 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 275-503 |
| Cow position: | chr17:43315052-43315274 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 275-504 |
| Cow position: | chr17:1025596-1025813 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 275-504 |
| Cow position: | chr17:33933510-33933734 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 277-502 |
| Cow position: | chr17:24862690-24862471 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 277-503 |
| Cow position: | chr17:24163269-24163052 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 278-441 |
| Cow position: | chr17:19543997-19544158 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 278-468 |
| Cow position: | chr17:5027230-5027413 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 278-501 |
| Cow position: | chr17:12510750-12510961 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 278-501 |
| Cow position: | chr17:31037143-31037363 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 278-503 |
| Cow position: | chr17:7810512-7810743 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 278-503 |
| Cow position: | chr17:27440411-27440188 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 281-481 |
| Cow position: | chr17:40412810-40412617 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 281-487 |
| Cow position: | chr17:946587-946385 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-496 |
| Cow position: | chr17:25128123-25128334 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 281-500 |
| Cow position: | chr17:3389065-3388841 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 44, 162 |
| Conread position: | 281-500 |
| Cow position: | chr17:42150619-42150406 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-501 |
| Cow position: | chr17:36864854-36864644 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-502 |
| Cow position: | chr17:5372301-5372515 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 218, 43 |
| Conread position: | 281-502 |
| Cow position: | chr17:11831887-11832102 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 281-503 |
| Cow position: | chr17:24004604-24004384 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 281-503 |
| Cow position: | chr17:25901439-25901212 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 281-503 |
| Cow position: | chr17:30713577-30713357 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 281-503 |
| Cow position: | chr17:32989704-32989489 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 281-503 |
| Cow position: | chr17:32993396-32993611 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 281-503 |
| Cow position: | chr17:40639178-40638959 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 281-504 |
| Cow position: | chr17:17044104-17044321 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 281-504 |
| Cow position: | chr17:22051360-22051578 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 281-504 |
| Cow position: | chr17:37340800-37341027 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 283-472 |
| Cow position: | chr17:12215024-12215215 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 283-503 |
| Cow position: | chr17:908968-908753 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 283-504 |
| Cow position: | chr17:20022285-20022503 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 286-461 |
| Cow position: | chr17:24767062-24767234 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 38 |
| Conread position: | 286-502 |
| Cow position: | chr17:1063394-1063189 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 163, 23 |
| Conread position: | 286-503 |
| Cow position: | chr17:23100996-23101207 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 286-504 |
| Cow position: | chr17:12325544-12325754 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 286-504 |
| Cow position: | chr17:12536248-12536454 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 287-503 |
| Cow position: | chr17:17035171-17034961 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 290-502 |
| Cow position: | chr17:11912283-11912490 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 290-503 |
| Cow position: | chr17:5422856-5423057 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 290-503 |
| Cow position: | chr17:41429366-41429584 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 291-502 |
| Cow position: | chr17:40852189-40851986 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 298-504 |
| Cow position: | chr17:12959316-12959117 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 302-503 |
| Cow position: | chr17:23516731-23516930 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 303-503 |
| Cow position: | chr17:45296620-45296427 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 305-495 |
| Cow position: | chr17:15340542-15340734 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 307-486 |
| Cow position: | chr17:9713138-9713313 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 307-501 |
| Cow position: | chr17:20932540-20932345 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 316-504 |
| Cow position: | chr17:28284833-28285017 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 321-444 |
| Cow position: | chr17:30977212-30977091 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 323-464 |
| Cow position: | chr17:25348560-25348419 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-503 |
| Cow position: | chr17:39606618-39606442 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 323-503 |
| Cow position: | chr17:40276934-40276752 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 323-504 |
| Cow position: | chr17:18108893-18109073 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 326-503 |
| Cow position: | chr17:5768089-5767919 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 329-495 |
| Cow position: | chr17:20392334-20392171 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 332-468 |
| Cow position: | chr17:24790004-24789868 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 342-501 |
| Cow position: | chr17:29157589-29157433 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 342-503 |
| Cow position: | chr17:11306381-11306221 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 342-503 |
| Cow position: | chr17:35126878-35126722 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 342-503 |
| Cow position: | chr17:35338744-35338908 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 155 |
| Conread position: | 342-504 |
| Cow position: | chr17:24822034-24821872 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 136, 107 |
| Conread position: | 343-495 |
| Cow position: | chr17:13236170-13236320 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 343-496 |
| Cow position: | chr17:18592615-18592461 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 343-500 |
| Cow position: | chr17:18766823-18766982 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 17 |
| Conread position: | 343-501 |
| Cow position: | chr17:22056860-22057014 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 343-501 |
| Cow position: | chr17:24554167-24554010 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 343-504 |
| Cow position: | chr17:22016917-22017073 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 343-504 |
| Cow position: | chr17:32273515-32273677 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 344-494 |
| Cow position: | chr17:35573923-35573773 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 348-499 |
| Cow position: | chr17:1410070-1410222 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 348-501 |
| Cow position: | chr17:265837-265686 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 348-502 |
| Cow position: | chr17:9911924-9911773 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 348-503 |
| Cow position: | chr17:33793330-33793178 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 352-499 |
| Cow position: | chr17:17406298-17406151 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 352-503 |
| Cow position: | chr17:39736337-39736189 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 354-500 |
| Cow position: | chr17:20990029-20990177 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 81 |
| Conread position: | 355-503 |
| Cow position: | chr17:40331924-40331780 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 358-502 |
| Cow position: | chr17:12591331-12591182 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 360-502 |
| Cow position: | chr17:21757986-21758128 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 360-503 |
| Cow position: | chr17:3577692-3577551 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 361-494 |
| Cow position: | chr17:11478923-11478790 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-500 |
| Cow position: | chr17:4121576-4121714 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 361-500 |
| Cow position: | chr17:18848004-18848143 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-500 |
| Cow position: | chr17:29075930-29076068 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 361-502 |
| Cow position: | chr17:30213039-30212903 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 365-502 |
| Cow position: | chr17:33657919-33658055 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 366-501 |
| Cow position: | chr17:9932151-9932286 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-504 |
| Cow position: | chr17:1040892-1040755 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 370-482 |
| Cow position: | chr17:39485907-39485795 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-499 |
| Cow position: | chr17:27665963-27666090 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 373-503 |
| Cow position: | chr17:3503723-3503594 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 375-499 |
| Cow position: | chr17:11368710-11368833 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.