Cow genome map

Conread name: Ss1.1-Pig3-SRG8011E05.5

Conread position: 199-499
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 17

Conread position: 219-502
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 112

Conread position: 244-503
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 7

Conread position: 252-503
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 20

Conread position: 253-471
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 72

Conread position: 253-498
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 16

Conread position: 253-498
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 19

Conread position: 253-502
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 254-448
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 21

Conread position: 257-503
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 53

Conread position: 257-503
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 63

Conread position: 257-503
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 68

Conread position: 257-504
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 18

Conread position: 258-429
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 67

Conread position: 258-433
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 67

Conread position: 258-502
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 39

Conread position: 258-503
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 25, 67

Conread position: 258-503
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 13

Conread position: 258-503
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 258-504
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 67

Conread position: 258-504
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 17

Conread position: 261-498
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 59

Conread position: 261-501
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 22, 56

Conread position: 261-503
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 14

Conread position: 262-504
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 87

Conread position: 264-441
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 61

Conread position: 264-503
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 60

Conread position: 265-482
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 18, 10

Conread position: 265-498
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 265-498
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 61

Conread position: 265-503
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 265-503
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 32

Conread position: 265-503
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 45

Conread position: 265-504
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 60

Conread position: 266-502
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 59

Conread position: 267-494
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 37

Conread position: 267-501
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 32

Conread position: 267-503
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 16, 53

Conread position: 267-504
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 268-473
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 16, 7

Conread position: 268-500
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 57

Conread position: 269-448
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 269-488
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 35

Conread position: 269-503
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 45

Conread position: 269-503
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 35

Conread position: 269-503
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 55

Conread position: 270-472
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 56

Conread position: 271-499
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 44

Conread position: 271-503
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 43

Conread position: 271-504
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 43

Conread position: 272-488
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 21

Conread position: 272-498
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 164

Conread position: 272-504
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 53

Conread position: 273-503
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 32

Conread position: 275-502
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 64

Conread position: 275-502
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 39

Conread position: 275-503
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 51

Conread position: 275-503
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 275-503
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 39

Conread position: 275-503
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 142

Conread position: 278-500
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 6, 45

Conread position: 278-503
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 35

Conread position: 281-448
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 281-476
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 281-498
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 179, 47

Conread position: 281-498
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 32

Conread position: 281-500
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 179, 15

Conread position: 281-500
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 62

Conread position: 281-501
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 217, 43

Conread position: 281-502
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 281-502
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 171, 43

Conread position: 281-502
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 30

Conread position: 281-503
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 81, 43

Conread position: 281-503
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 43

Conread position: 281-503
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 38

Conread position: 281-504
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 282-504
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 283-501
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 283-501
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 41

Conread position: 283-503
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 284-503
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 173, 37

Conread position: 286-488
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 27

Conread position: 286-502
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 176, 38

Conread position: 290-496
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 201, 93

Conread position: 292-503
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 299-502
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 301-503
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 23

Conread position: 302-498
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 16

Conread position: 307-499
Cow position:
Alignm length: 195
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 131

Conread position: 320-502
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 17

Conread position: 321-489
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 66

Conread position: 321-503
Cow position:
Alignm length: 183
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 323-474
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 323-485
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 323-489
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 323-503
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 100

Conread position: 323-503
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 326-503
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 111

Conread position: 328-503
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 29

Conread position: 329-501
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 329-503
Cow position:
Alignm length: 176
Alignm identity: 142
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 334-502
Cow position:
Alignm length: 169
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 342-500
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 343-497
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 343-503
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 343-504
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 87

Conread position: 345-499
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 99

Conread position: 347-501
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 0

Conread position: 348-503
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 29

Conread position: 349-500
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 352-501
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 352-503
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 360-497
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 118, 127

Conread position: 360-500
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 360-502
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 360-503
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 360-504
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 361-493
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 361-500
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 361-502
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 361-503
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 361-503
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 362-499
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 367-503
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 367-504
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 370-485
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 370-500
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 370-500
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 370-501
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 370-502
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 370-503
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 375-503
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.