Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E05.5 |
| Conread position: | 199-499 |
| Cow position: | chr28:3023637-3023933 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 219-502 |
| Cow position: | chr28:3011003-3011292 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 244-503 |
| Cow position: | chr28:8787770-8787518 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 252-503 |
| Cow position: | chr28:11348650-11348400 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 253-471 |
| Cow position: | chr28:10890518-10890727 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 72 |
| Conread position: | 253-498 |
| Cow position: | chr28:2960593-2960850 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 253-498 |
| Cow position: | chr28:11016627-11016389 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 253-502 |
| Cow position: | chr28:21868681-21868434 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 72 |
| Conread position: | 254-448 |
| Cow position: | chr28:8936370-8936181 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 257-503 |
| Cow position: | chr28:11426328-11426564 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 257-503 |
| Cow position: | chr28:24966606-24966363 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 257-503 |
| Cow position: | chr28:29416505-29416741 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 257-504 |
| Cow position: | chr28:9705875-9705628 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 258-429 |
| Cow position: | chr28:24238265-24238427 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 258-433 |
| Cow position: | chr28:4866359-4866527 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 258-502 |
| Cow position: | chr28:4016742-4016508 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 258-503 |
| Cow position: | chr28:5138780-5139015 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 258-503 |
| Cow position: | chr28:17948899-17949137 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 258-503 |
| Cow position: | chr28:33884620-33884380 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 258-504 |
| Cow position: | chr28:3492568-3492808 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 258-504 |
| Cow position: | chr28:27161098-27161351 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 261-498 |
| Cow position: | chr28:5684916-5684685 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 261-501 |
| Cow position: | chr28:13474515-13474278 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 261-503 |
| Cow position: | chr28:3746412-3746173 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 262-504 |
| Cow position: | chr28:9285162-9285395 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 264-441 |
| Cow position: | chr28:10763101-10762932 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 264-503 |
| Cow position: | chr28:29988895-29989143 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 265-482 |
| Cow position: | chr28:30902332-30902123 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 265-498 |
| Cow position: | chr28:4159176-4158936 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 265-498 |
| Cow position: | chr28:32358317-32358089 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 265-503 |
| Cow position: | chr28:6975444-6975217 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 265-503 |
| Cow position: | chr28:7350862-7350630 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 265-503 |
| Cow position: | chr28:7618948-7619175 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 265-504 |
| Cow position: | chr28:5255083-5254849 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 266-502 |
| Cow position: | chr28:7131880-7132111 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 267-494 |
| Cow position: | chr28:29850612-29850830 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 267-501 |
| Cow position: | chr28:24646793-24646571 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 267-503 |
| Cow position: | chr28:17740035-17739801 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 267-504 |
| Cow position: | chr28:9636247-9636482 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 268-473 |
| Cow position: | chr28:9109419-9109222 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 268-500 |
| Cow position: | chr28:11079509-11079287 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 269-448 |
| Cow position: | chr28:3759205-3759021 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 269-488 |
| Cow position: | chr28:5805870-5805662 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 269-503 |
| Cow position: | chr28:5436878-5437109 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 269-503 |
| Cow position: | chr28:10615742-10615970 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 269-503 |
| Cow position: | chr28:20124989-20124760 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 270-472 |
| Cow position: | chr28:2777737-2777537 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 271-499 |
| Cow position: | chr28:5577738-5577506 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 271-503 |
| Cow position: | chr28:9740664-9740442 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 271-504 |
| Cow position: | chr28:3726002-3726236 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 272-488 |
| Cow position: | chr28:8396530-8396326 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 272-498 |
| Cow position: | chr28:11828754-11828975 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 164 |
| Conread position: | 272-504 |
| Cow position: | chr28:4884048-4884279 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 273-503 |
| Cow position: | chr28:25057160-25056942 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 275-502 |
| Cow position: | chr28:4182207-4181978 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 275-502 |
| Cow position: | chr28:8140685-8140459 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 275-503 |
| Cow position: | chr28:3445277-3445504 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 275-503 |
| Cow position: | chr28:4089859-4090078 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 275-503 |
| Cow position: | chr28:10978040-10977817 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 275-503 |
| Cow position: | chr28:20759491-20759725 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 142 |
| Conread position: | 278-500 |
| Cow position: | chr28:16369890-16370104 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 278-503 |
| Cow position: | chr28:16204132-16204358 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 281-448 |
| Cow position: | chr28:3678554-3678393 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-476 |
| Cow position: | chr28:24996423-24996610 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 281-498 |
| Cow position: | chr28:4101707-4101501 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 179, 47 |
| Conread position: | 281-498 |
| Cow position: | chr28:6091551-6091339 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 153, 32 |
| Conread position: | 281-500 |
| Cow position: | chr28:4071153-4070946 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 179, 15 |
| Conread position: | 281-500 |
| Cow position: | chr28:25129079-25128866 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 281-501 |
| Cow position: | chr28:16918979-16919191 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 217, 43 |
| Conread position: | 281-502 |
| Cow position: | chr28:4013278-4013061 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-502 |
| Cow position: | chr28:8304437-8304224 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 171, 43 |
| Conread position: | 281-502 |
| Cow position: | chr28:11527064-11527281 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 281-503 |
| Cow position: | chr28:777871-777651 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 281-503 |
| Cow position: | chr28:3410794-3411011 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 281-503 |
| Cow position: | chr28:4834648-4834868 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 281-504 |
| Cow position: | chr28:7267754-7267968 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 282-504 |
| Cow position: | chr28:14998258-14998042 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 283-501 |
| Cow position: | chr28:19564042-19564250 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 283-501 |
| Cow position: | chr28:24082463-24082248 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 283-503 |
| Cow position: | chr28:21845144-21844934 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 284-503 |
| Cow position: | chr28:12991327-12991112 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 173, 37 |
| Conread position: | 286-488 |
| Cow position: | chr28:7557540-7557743 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 286-502 |
| Cow position: | chr28:3914895-3914693 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 176, 38 |
| Conread position: | 290-496 |
| Cow position: | chr28:12430793-12430588 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 201, 93 |
| Conread position: | 292-503 |
| Cow position: | chr28:3741053-3740852 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 299-502 |
| Cow position: | chr28:16346359-16346554 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 301-503 |
| Cow position: | chr28:16210926-16211124 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 74, 23 |
| Conread position: | 302-498 |
| Cow position: | chr28:6971172-6971367 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 307-499 |
| Cow position: | chr28:15043688-15043881 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 131 |
| Conread position: | 320-502 |
| Cow position: | chr28:10172259-10172439 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 321-489 |
| Cow position: | chr28:26531119-26531287 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 66 |
| Conread position: | 321-503 |
| Cow position: | chr28:3408063-3408242 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 323-474 |
| Cow position: | chr28:10212271-10212422 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-485 |
| Cow position: | chr28:16879725-16879567 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 323-489 |
| Cow position: | chr28:3397050-3397207 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 323-503 |
| Cow position: | chr28:10775554-10775737 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 323-503 |
| Cow position: | chr28:10863638-10863808 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 326-503 |
| Cow position: | chr28:11422661-11422837 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 328-503 |
| Cow position: | chr28:25596775-25596606 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 329-501 |
| Cow position: | chr28:4938952-4938791 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 329-503 |
| Cow position: | chr28:5204346-5204171 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 334-502 |
| Cow position: | chr28:29199874-29199708 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 342-500 |
| Cow position: | chr28:12070368-12070217 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 343-497 |
| Cow position: | chr28:2131788-2131942 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-503 |
| Cow position: | chr28:26220392-26220234 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 343-504 |
| Cow position: | chr28:12964705-12964545 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 345-499 |
| Cow position: | chr28:4179686-4179535 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 347-501 |
| Cow position: | chr28:4051330-4051179 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 348-503 |
| Cow position: | chr28:33052167-33052011 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 349-500 |
| Cow position: | chr28:11752011-11752159 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 352-501 |
| Cow position: | chr28:19025878-19026027 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 352-503 |
| Cow position: | chr28:30937544-30937691 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 360-497 |
| Cow position: | chr28:7498028-7498165 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 118, 127 |
| Conread position: | 360-500 |
| Cow position: | chr28:10588903-10589042 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 360-502 |
| Cow position: | chr28:4361332-4361471 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 360-503 |
| Cow position: | chr28:4438831-4438687 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 360-504 |
| Cow position: | chr28:11884402-11884550 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 361-493 |
| Cow position: | chr28:3147596-3147468 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 361-500 |
| Cow position: | chr28:11585084-11585223 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-502 |
| Cow position: | chr28:9684216-9684357 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-503 |
| Cow position: | chr28:7865447-7865303 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 361-503 |
| Cow position: | chr28:12619692-12619551 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 362-499 |
| Cow position: | chr28:11816549-11816686 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-503 |
| Cow position: | chr28:2762307-2762171 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-504 |
| Cow position: | chr28:26614985-26614848 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-485 |
| Cow position: | chr28:25675396-25675511 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-500 |
| Cow position: | chr28:8021994-8022123 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 370-500 |
| Cow position: | chr28:22813367-22813241 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 370-501 |
| Cow position: | chr28:2862977-2862846 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-502 |
| Cow position: | chr28:5128619-5128752 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 370-503 |
| Cow position: | chr28:5205380-5205247 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 375-503 |
| Cow position: | chr28:4809883-4809755 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.