Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E05.5 |
| Conread position: | 216-504 |
| Cow position: | chr6:24468102-24468385 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 237-486 |
| Cow position: | chr6:45690341-45690582 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 239-503 |
| Cow position: | chr6:3351304-3351039 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 243-431 |
| Cow position: | chr6:21346888-21347068 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 246-476 |
| Cow position: | chr6:21083277-21083503 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 253-498 |
| Cow position: | chr6:1866986-1866748 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 253-503 |
| Cow position: | chr6:67069562-67069804 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 155, 18 |
| Conread position: | 256-496 |
| Cow position: | chr6:2547517-2547273 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 256-499 |
| Cow position: | chr6:9302473-9302702 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 256-503 |
| Cow position: | chr6:5609189-5609434 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 24 |
| Conread position: | 257-502 |
| Cow position: | chr6:1941584-1941820 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 168, 21 |
| Conread position: | 257-503 |
| Cow position: | chr6:23696249-23696011 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 257-504 |
| Cow position: | chr6:17794501-17794754 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 258-504 |
| Cow position: | chr6:61269571-61269322 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 259-464 |
| Cow position: | chr6:60186402-60186613 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 259-476 |
| Cow position: | chr6:3937040-3936822 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 261-504 |
| Cow position: | chr6:17068404-17068637 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 262-503 |
| Cow position: | chr6:120487-120258 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 263-501 |
| Cow position: | chr6:4383724-4383493 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 264-500 |
| Cow position: | chr6:30024125-30023899 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 264-502 |
| Cow position: | chr6:47575138-47574918 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 264-504 |
| Cow position: | chr6:21470185-21470419 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 264-504 |
| Cow position: | chr6:62056859-62056624 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 265-503 |
| Cow position: | chr6:60143952-60144188 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 265-503 |
| Cow position: | chr6:63066084-63065837 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 265-503 |
| Cow position: | chr6:68376068-68376311 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 266-457 |
| Cow position: | chr6:34423214-34423402 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 266-503 |
| Cow position: | chr6:48097357-48097594 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 266-503 |
| Cow position: | chr6:50504702-50504467 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 266-504 |
| Cow position: | chr6:693899-694141 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 266-504 |
| Cow position: | chr6:10105738-10105969 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 266-504 |
| Cow position: | chr6:66839439-66839208 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 266-504 |
| Cow position: | chr6:67451126-67451361 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 267-500 |
| Cow position: | chr6:44194311-44194535 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 267-502 |
| Cow position: | chr6:32866976-32867205 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 267-503 |
| Cow position: | chr6:29775863-29775633 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 138 |
| Conread position: | 267-503 |
| Cow position: | chr6:57545984-57546210 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 267-503 |
| Cow position: | chr6:60850943-60850712 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 268-448 |
| Cow position: | chr6:50577759-50577586 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 268-503 |
| Cow position: | chr6:46466060-46465832 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 269-498 |
| Cow position: | chr6:59602972-59603192 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 269-502 |
| Cow position: | chr6:53460328-53460555 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 269-503 |
| Cow position: | chr6:42035013-42034783 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 271-482 |
| Cow position: | chr6:16091138-16090935 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 271-499 |
| Cow position: | chr6:12623749-12623530 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 271-500 |
| Cow position: | chr6:55282051-55282280 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 271-503 |
| Cow position: | chr6:26155386-26155159 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 275-433 |
| Cow position: | chr6:54406568-54406719 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 275-476 |
| Cow position: | chr6:36537126-36537323 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 275-499 |
| Cow position: | chr6:58725604-58725385 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 275-503 |
| Cow position: | chr6:60273774-60274000 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 275-503 |
| Cow position: | chr6:61110019-61109798 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 275-504 |
| Cow position: | chr6:7128167-7128393 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 275-504 |
| Cow position: | chr6:53024574-53024794 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 278-451 |
| Cow position: | chr6:32006222-32006392 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 279-502 |
| Cow position: | chr6:46859938-46860156 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 220, 45 |
| Conread position: | 280-504 |
| Cow position: | chr6:57079657-57079433 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 281-471 |
| Cow position: | chr6:7291541-7291358 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-472 |
| Cow position: | chr6:21350801-21350991 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 281-496 |
| Cow position: | chr6:53546259-53546053 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-498 |
| Cow position: | chr6:15243069-15242850 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 281-499 |
| Cow position: | chr6:25614860-25615080 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 281-499 |
| Cow position: | chr6:36203051-36202836 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 43 |
| Conread position: | 281-499 |
| Cow position: | chr6:47520284-47520068 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 281-501 |
| Cow position: | chr6:5820030-5820234 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 281-501 |
| Cow position: | chr6:39358113-39358332 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 177, 38 |
| Conread position: | 281-502 |
| Cow position: | chr6:37149412-37149201 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 281-502 |
| Cow position: | chr6:65871261-65871049 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 281-503 |
| Cow position: | chr6:29485313-29485093 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 282-502 |
| Cow position: | chr6:60740239-60740026 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 283-497 |
| Cow position: | chr6:18117823-18118032 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 283-502 |
| Cow position: | chr6:19264273-19264487 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 283-503 |
| Cow position: | chr6:24031591-24031390 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 283-503 |
| Cow position: | chr6:38207258-38207478 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 283-504 |
| Cow position: | chr6:38853428-38853649 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 285-504 |
| Cow position: | chr6:13687590-13687802 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 286-474 |
| Cow position: | chr6:41657495-41657307 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 286-492 |
| Cow position: | chr6:12761505-12761301 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 286-502 |
| Cow position: | chr6:8966313-8966110 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 286-503 |
| Cow position: | chr6:31535348-31535558 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 286-503 |
| Cow position: | chr6:68816395-68816179 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 286-504 |
| Cow position: | chr6:54133036-54132826 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 287-499 |
| Cow position: | chr6:32122119-32121922 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 287-501 |
| Cow position: | chr6:15305795-15305584 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 287-501 |
| Cow position: | chr6:63720416-63720213 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 287-503 |
| Cow position: | chr6:21293274-21293485 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 290-501 |
| Cow position: | chr6:2078595-2078802 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 290-502 |
| Cow position: | chr6:1870976-1871186 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 293-500 |
| Cow position: | chr6:57571697-57571493 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 298-503 |
| Cow position: | chr6:36920762-36920963 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 300-503 |
| Cow position: | chr6:67643478-67643680 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 302-502 |
| Cow position: | chr6:15243471-15243265 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 307-503 |
| Cow position: | chr6:31078660-31078865 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 317-498 |
| Cow position: | chr6:54990806-54990986 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 173, 19 |
| Conread position: | 317-504 |
| Cow position: | chr6:1002069-1002253 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 320-503 |
| Cow position: | chr6:47799488-47799304 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 321-502 |
| Cow position: | chr6:2585135-2584954 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 321-503 |
| Cow position: | chr6:21590899-21590718 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 323-503 |
| Cow position: | chr6:38640426-38640244 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 323-504 |
| Cow position: | chr6:52478219-52478401 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 329-500 |
| Cow position: | chr6:48112382-48112212 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 331-503 |
| Cow position: | chr6:61168940-61168766 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 335-472 |
| Cow position: | chr6:28900505-28900368 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-499 |
| Cow position: | chr6:46282826-46282989 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 340-503 |
| Cow position: | chr6:58459894-58459732 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 342-503 |
| Cow position: | chr6:6401122-6400965 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 343-502 |
| Cow position: | chr6:49437504-49437345 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-503 |
| Cow position: | chr6:23465862-23466022 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 347-501 |
| Cow position: | chr6:61524038-61524192 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 348-501 |
| Cow position: | chr6:46571270-46571119 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 348-503 |
| Cow position: | chr6:61569794-61569643 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 349-502 |
| Cow position: | chr6:1422651-1422498 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-500 |
| Cow position: | chr6:9452608-9452756 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 352-503 |
| Cow position: | chr6:7119457-7119608 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 352-503 |
| Cow position: | chr6:22985691-22985844 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 138 |
| Conread position: | 352-503 |
| Cow position: | chr6:67805853-67806004 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 352-504 |
| Cow position: | chr6:53652202-53652051 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 354-503 |
| Cow position: | chr6:54471772-54471920 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 102, 81 |
| Conread position: | 354-503 |
| Cow position: | chr6:68685713-68685565 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 355-500 |
| Cow position: | chr6:60516984-60516840 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 355-504 |
| Cow position: | chr6:18422831-18422980 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 360-503 |
| Cow position: | chr6:53090162-53090020 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 360-503 |
| Cow position: | chr6:58597351-58597495 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 360-504 |
| Cow position: | chr6:59770376-59770238 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 361-498 |
| Cow position: | chr6:13040592-13040457 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 361-498 |
| Cow position: | chr6:29248631-29248496 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 361-499 |
| Cow position: | chr6:17414292-17414432 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 361-500 |
| Cow position: | chr6:8209453-8209589 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 361-501 |
| Cow position: | chr6:21869496-21869636 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-501 |
| Cow position: | chr6:51463481-51463620 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 361-501 |
| Cow position: | chr6:66375180-66375320 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-503 |
| Cow position: | chr6:19259189-19259331 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-504 |
| Cow position: | chr6:28976887-28977030 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-504 |
| Cow position: | chr6:66570592-66570450 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-482 |
| Cow position: | chr6:23938207-23938092 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-499 |
| Cow position: | chr6:43651899-43651767 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-501 |
| Cow position: | chr6:4702677-4702810 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 367-501 |
| Cow position: | chr6:32853334-32853201 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 367-503 |
| Cow position: | chr6:20929367-20929502 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 367-503 |
| Cow position: | chr6:21231672-21231535 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 367-503 |
| Cow position: | chr6:49398473-49398608 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 367-504 |
| Cow position: | chr6:60350145-60350282 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-501 |
| Cow position: | chr6:57328250-57328380 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 36 |
| Conread position: | 370-503 |
| Cow position: | chr6:12551413-12551281 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 370-504 |
| Cow position: | chr6:50976192-50976058 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-504 |
| Cow position: | chr6:60266039-60266171 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 371-500 |
| Cow position: | chr6:20097816-20097945 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-501 |
| Cow position: | chr6:47640291-47640419 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.