Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011E05.5 |
| Conread position: | 217-502 |
| Cow position: | chrX:35986100-35985819 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 237-502 |
| Cow position: | chrX:46291401-46291137 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 171, 11 |
| Conread position: | 244-503 |
| Cow position: | chrX:11325853-11326100 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 249, 27 |
| Conread position: | 247-490 |
| Cow position: | chrX:17795231-17794992 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 248-428 |
| Cow position: | chrX:13784959-13785149 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 253-497 |
| Cow position: | chrX:12437036-12437266 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 253-500 |
| Cow position: | chrX:2936201-2935958 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 253-503 |
| Cow position: | chrX:30337707-30337954 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 253-504 |
| Cow position: | chrX:42380864-42381115 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 257-499 |
| Cow position: | chrX:27261433-27261193 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 100, 44 |
| Conread position: | 257-503 |
| Cow position: | chrX:39290598-39290357 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 258-441 |
| Cow position: | chrX:23497450-23497631 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 258-441 |
| Cow position: | chrX:42087069-42086887 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 258-488 |
| Cow position: | chrX:20957480-20957251 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 258-500 |
| Cow position: | chrX:11633924-11633683 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 258-501 |
| Cow position: | chrX:34315771-34315519 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 258-503 |
| Cow position: | chrX:27145842-27145602 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 258-503 |
| Cow position: | chrX:31436713-31436472 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 258-503 |
| Cow position: | chrX:41027401-41027158 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 258-503 |
| Cow position: | chrX:42246939-42247184 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 262-504 |
| Cow position: | chrX:38549686-38549442 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 264-451 |
| Cow position: | chrX:31983341-31983535 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 264-503 |
| Cow position: | chrX:37780871-37781111 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 265-475 |
| Cow position: | chrX:23358881-23359085 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 265-503 |
| Cow position: | chrX:8869168-8869404 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 265-504 |
| Cow position: | chrX:22115078-22115320 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 266-503 |
| Cow position: | chrX:4399352-4399124 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 266-503 |
| Cow position: | chrX:34412083-34411844 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 266-504 |
| Cow position: | chrX:4289669-4289439 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 266-504 |
| Cow position: | chrX:42894157-42893921 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 267-431 |
| Cow position: | chrX:6480361-6480526 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 267-501 |
| Cow position: | chrX:4152810-4153031 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 267-502 |
| Cow position: | chrX:19469283-19469507 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 267-503 |
| Cow position: | chrX:27306673-27306452 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 267-504 |
| Cow position: | chrX:27668728-27668961 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 269-482 |
| Cow position: | chrX:5026483-5026275 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 269-502 |
| Cow position: | chrX:12979603-12979835 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 269-503 |
| Cow position: | chrX:5118266-5118504 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 269-504 |
| Cow position: | chrX:16984867-16984638 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 269-504 |
| Cow position: | chrX:42480059-42479830 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 270-433 |
| Cow position: | chrX:41215554-41215390 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 270-441 |
| Cow position: | chrX:14135906-14135738 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 270-451 |
| Cow position: | chrX:23471637-23471816 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 270-485 |
| Cow position: | chrX:20583891-20583682 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 270-499 |
| Cow position: | chrX:10251971-10252196 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 270-503 |
| Cow position: | chrX:9251932-9252164 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 270-503 |
| Cow position: | chrX:27431693-27431920 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 271-416 |
| Cow position: | chrX:31279697-31279839 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 271-482 |
| Cow position: | chrX:47855206-47855000 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 271-497 |
| Cow position: | chrX:32942850-32943072 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 271-501 |
| Cow position: | chrX:29050472-29050250 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 271-503 |
| Cow position: | chrX:34792093-34792313 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 272-498 |
| Cow position: | chrX:45110880-45110658 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 272-500 |
| Cow position: | chrX:12972907-12972682 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 272-500 |
| Cow position: | chrX:16836065-16836285 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 272-501 |
| Cow position: | chrX:41871286-41871067 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 272-502 |
| Cow position: | chrX:45502365-45502144 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 272-503 |
| Cow position: | chrX:9201772-9201546 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 272-504 |
| Cow position: | chrX:20584541-20584325 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 275-436 |
| Cow position: | chrX:39642402-39642557 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 275-466 |
| Cow position: | chrX:34991587-34991399 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 275-488 |
| Cow position: | chrX:28940470-28940254 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 275-489 |
| Cow position: | chrX:29467557-29467766 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 275-495 |
| Cow position: | chrX:33855000-33855214 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 275-498 |
| Cow position: | chrX:34377165-34376947 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 275-502 |
| Cow position: | chrX:6599548-6599783 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 275-502 |
| Cow position: | chrX:34504828-34505049 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 147, 49 |
| Conread position: | 275-502 |
| Cow position: | chrX:45977150-45976925 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 275-503 |
| Cow position: | chrX:13177258-13177481 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 275-504 |
| Cow position: | chrX:11656304-11656078 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 278-497 |
| Cow position: | chrX:9650805-9651020 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 278-503 |
| Cow position: | chrX:40685107-40685330 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 278-504 |
| Cow position: | chrX:38642464-38642246 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 279-503 |
| Cow position: | chrX:43115371-43115149 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 280-502 |
| Cow position: | chrX:41238142-41238356 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 218, 44 |
| Conread position: | 280-503 |
| Cow position: | chrX:17956909-17956691 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 281-471 |
| Cow position: | chrX:8327124-8326934 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 281-476 |
| Cow position: | chrX:32867089-32866900 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-476 |
| Cow position: | chrX:37072605-37072414 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 281-485 |
| Cow position: | chrX:31480185-31479987 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 43 |
| Conread position: | 281-499 |
| Cow position: | chrX:22075014-22074797 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 149, 20 |
| Conread position: | 281-501 |
| Cow position: | chrX:4467170-4466967 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-502 |
| Cow position: | chrX:21986082-21986291 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 281-502 |
| Cow position: | chrX:47079846-47079626 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 281-503 |
| Cow position: | chrX:1087929-1088142 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-503 |
| Cow position: | chrX:1466382-1466160 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 281-503 |
| Cow position: | chrX:6544464-6544255 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 281-503 |
| Cow position: | chrX:34314240-34314029 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 281-503 |
| Cow position: | chrX:41526315-41526524 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 283-496 |
| Cow position: | chrX:38560767-38560564 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 283-501 |
| Cow position: | chrX:24749304-24749088 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 283-501 |
| Cow position: | chrX:26881345-26881565 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 283-502 |
| Cow position: | chrX:42927613-42927826 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 215, 30 |
| Conread position: | 283-503 |
| Cow position: | chrX:22392771-22392986 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 283-503 |
| Cow position: | chrX:29230224-29229997 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 283-503 |
| Cow position: | chrX:32208610-32208824 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 283-503 |
| Cow position: | chrX:38853428-38853196 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 165 |
| Conread position: | 283-503 |
| Cow position: | chrX:42855680-42855457 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 286-503 |
| Cow position: | chrX:34836858-34837065 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 287-501 |
| Cow position: | chrX:19394768-19394553 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 290-504 |
| Cow position: | chrX:35543094-35542892 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 290-504 |
| Cow position: | chrX:40035229-40035444 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 292-502 |
| Cow position: | chrX:41068928-41068724 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 298-504 |
| Cow position: | chrX:36848378-36848581 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 299-502 |
| Cow position: | chrX:47061588-47061395 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 302-504 |
| Cow position: | chrX:13647586-13647787 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 303-503 |
| Cow position: | chrX:5919689-5919490 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 22 |
| Conread position: | 306-503 |
| Cow position: | chrX:878186-878382 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 307-504 |
| Cow position: | chrX:40531855-40532046 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 309-504 |
| Cow position: | chrX:616070-616262 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 319-495 |
| Cow position: | chrX:36068198-36068021 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 319-504 |
| Cow position: | chrX:17726161-17725972 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 320-501 |
| Cow position: | chrX:4515872-4515685 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 321-503 |
| Cow position: | chrX:34532701-34532518 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 323-488 |
| Cow position: | chrX:41862541-41862377 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 323-499 |
| Cow position: | chrX:14275567-14275741 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 323-503 |
| Cow position: | chrX:6414219-6414044 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 176, 99 |
| Conread position: | 323-503 |
| Cow position: | chrX:38587661-38587845 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 326-504 |
| Cow position: | chrX:47345508-47345323 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 342-503 |
| Cow position: | chrX:41884255-41884414 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 343-500 |
| Cow position: | chrX:27393868-27394025 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-503 |
| Cow position: | chrX:169388-169547 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 343-503 |
| Cow position: | chrX:40269652-40269489 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 343-504 |
| Cow position: | chrX:618852-619005 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 347-501 |
| Cow position: | chrX:42160777-42160627 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 347-503 |
| Cow position: | chrX:31312183-31312027 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-503 |
| Cow position: | chrX:40557522-40557681 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 348-500 |
| Cow position: | chrX:5135367-5135522 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 349-504 |
| Cow position: | chrX:24424249-24424403 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 352-501 |
| Cow position: | chrX:41192853-41192704 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 353-502 |
| Cow position: | chrX:48014583-48014434 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 353-504 |
| Cow position: | chrX:38006623-38006769 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 354-501 |
| Cow position: | chrX:29501737-29501881 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 355-482 |
| Cow position: | chrX:34508690-34508563 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-471 |
| Cow position: | chrX:4942118-4942228 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-501 |
| Cow position: | chrX:25328476-25328615 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 361-503 |
| Cow position: | chrX:46429679-46429821 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-500 |
| Cow position: | chrX:4615872-4616010 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 362-500 |
| Cow position: | chrX:11073052-11073190 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-503 |
| Cow position: | chrX:19943097-19943236 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 367-475 |
| Cow position: | chrX:21573706-21573599 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 367-501 |
| Cow position: | chrX:11938798-11938935 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 367-501 |
| Cow position: | chrX:35224429-35224296 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 367-502 |
| Cow position: | chrX:2523548-2523683 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 367-502 |
| Cow position: | chrX:37232541-37232407 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 370-479 |
| Cow position: | chrX:4617267-4617376 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-481 |
| Cow position: | chrX:20340512-20340623 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-500 |
| Cow position: | chrX:42469810-42469941 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 370-502 |
| Cow position: | chrX:11851548-11851683 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 370-502 |
| Cow position: | chrX:38066324-38066456 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-503 |
| Cow position: | chrX:45382915-45383047 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 370-504 |
| Cow position: | chrX:12082193-12082326 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 373-503 |
| Cow position: | chrX:19273579-19273709 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.