Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011I23.5 |
| Conread position: | 841-951 |
| Cow position: | chr3:14456432-14456322 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 841-960 |
| Cow position: | chr3:10958739-10958619 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 857-943 |
| Cow position: | chr3:80082331-80082245 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 857-960 |
| Cow position: | chr3:8716622-8716726 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 857-960 |
| Cow position: | chr3:56476070-56476175 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 857-960 |
| Cow position: | chr3:74233697-74233801 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 858-950 |
| Cow position: | chr3:58766784-58766875 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:2680027-2680120 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:18606568-18606660 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:24853088-24852995 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:39172024-39171931 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:55085702-55085609 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:66013869-66013962 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:70566251-70566158 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:73708542-73708634 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 858-951 |
| Cow position: | chr3:73764692-73764599 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-958 |
| Cow position: | chr3:79901990-79902091 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:2334772-2334875 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:4031403-4031506 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:6689483-6689585 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 858-960 |
| Cow position: | chr3:11254659-11254556 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:11333823-11333720 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:11447492-11447595 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:14280331-14280434 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:15191840-15191943 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:15954589-15954486 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:20389927-20389824 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:23169583-23169480 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:26920383-26920483 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 858-960 |
| Cow position: | chr3:35884466-35884363 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:37628538-37628641 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:43528750-43528647 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:49462915-49462812 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:60932919-60933022 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:74391253-74391150 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:74879171-74879068 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:77187937-77188040 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:82075612-82075510 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 858-960 |
| Cow position: | chr3:84598824-84598721 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 859-951 |
| Cow position: | chr3:68628212-68628120 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 859-960 |
| Cow position: | chr3:45668398-45668297 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 859-960 |
| Cow position: | chr3:48811498-48811395 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 860-960 |
| Cow position: | chr3:58383451-58383552 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 860-960 |
| Cow position: | chr3:69127297-69127196 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 869-960 |
| Cow position: | chr3:15052429-15052338 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.