Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8012B16.3.5
        

               Conread position:
               1-195
               

               Cow position:
               chr19:4926927-4927121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 171
               

               Conread position:
               193-297
               

               Cow position:
               chr19:4943464-4943568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-433
               

               Cow position:
               chr19:4960372-4960510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               135
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-528
               

               Cow position:
               chr19:4961648-4961746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               522-636
               

               Cow position:
               chr19:4963090-4963204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               115
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               635-804
               

               Cow position:
               chr19:4988401-4988570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               798-936
               

               Cow position:
               chr19:4999229-4999367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               936-1016
               

               Cow position:
               chr19:5034081-5034161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               77
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1064-1303
               

               Cow position:
               chr19:5063755-5063993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               1294-2580
               

               Cow position:
               chr19:5065055-5066339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1314
               

               Alignm identity:
               1104
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 160
               
Show alignments to all cow chromosomes.