Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8012D22.5 |
| Conread position: | 5-174 |
| Cow position: | chr21:40607446-40607612 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-242 |
| Cow position: | chr21:39149914-39149680 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-242 |
| Cow position: | chr21:40637206-40636969 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-242 |
| Cow position: | chr21:40652698-40652464 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-242 |
| Cow position: | chr21:40702894-40702660 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-242 |
| Cow position: | chr21:40674942-40674711 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 235-393 |
| Cow position: | chr21:39148554-39148399 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 235-393 |
| Cow position: | chr21:40610212-40610370 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-393 |
| Cow position: | chr21:40650862-40650707 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 235-393 |
| Cow position: | chr21:40701530-40701375 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 235-398 |
| Cow position: | chr21:40634374-40634210 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 133, 148 |
| Conread position: | 260-392 |
| Cow position: | chr21:40672615-40672483 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-573 |
| Cow position: | chr21:40611952-40612136 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 388-573 |
| Cow position: | chr21:40649650-40649465 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-644 |
| Cow position: | chr21:40633161-40632887 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 388-768 |
| Cow position: | chr21:39147350-39146939 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 91 |
| Conread position: | 388-768 |
| Cow position: | chr21:40671456-40671085 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 77, 186 |
| Conread position: | 388-768 |
| Cow position: | chr21:40700321-40699909 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 91 |
Show alignments to all cow chromosomes.