Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8012F10.3 |
| Conread position: | 1-119 |
| Cow position: | chr12:38165407-38165522 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-119 |
| Cow position: | chr12:46106923-46106806 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-123 |
| Cow position: | chr12:40434909-40435028 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:2835539-2835398 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:19272556-19272696 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-146 |
| Cow position: | chr12:41220879-41221017 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-147 |
| Cow position: | chr12:583370-583519 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-148 |
| Cow position: | chr12:4014288-4014443 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-148 |
| Cow position: | chr12:38774111-38774253 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-148 |
| Cow position: | chr12:44861123-44861270 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-158 |
| Cow position: | chr12:38679182-38679029 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-165 |
| Cow position: | chr12:29675005-29675169 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-172 |
| Cow position: | chr12:6480776-6480606 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-172 |
| Cow position: | chr12:19061374-19061540 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 1-173 |
| Cow position: | chr12:29316328-29316497 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 1-174 |
| Cow position: | chr12:4512317-4512487 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 1-177 |
| Cow position: | chr12:2964180-2964011 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-178 |
| Cow position: | chr12:5635318-5635493 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-184 |
| Cow position: | chr12:15089650-15089470 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-184 |
| Cow position: | chr12:23714806-23714628 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 180, 37 |
| Conread position: | 1-184 |
| Cow position: | chr12:24166815-24166990 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-184 |
| Cow position: | chr12:24663254-24663068 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-184 |
| Cow position: | chr12:45039241-45039061 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 149, 55 |
| Conread position: | 1-184 |
| Cow position: | chr12:45092574-45092400 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 1-189 |
| Cow position: | chr12:5135366-5135181 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 177, 49 |
| Conread position: | 1-189 |
| Cow position: | chr12:7884546-7884732 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:12233015-12232832 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 118, 45 |
| Conread position: | 1-189 |
| Cow position: | chr12:15703361-15703548 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 1-189 |
| Cow position: | chr12:17080400-17080209 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 1-189 |
| Cow position: | chr12:17269935-17269751 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:19261329-19261144 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:20776795-20776972 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:24032625-24032445 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:25561500-25561318 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 184, 57 |
| Conread position: | 1-189 |
| Cow position: | chr12:25917142-25917324 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:26777060-26777240 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:30745850-30745670 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 1-189 |
| Cow position: | chr12:36261828-36261638 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:36544511-36544694 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 1-189 |
| Cow position: | chr12:37169815-37169997 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:42879833-42879643 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 1-190 |
| Cow position: | chr12:6241458-6241267 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-190 |
| Cow position: | chr12:7902671-7902857 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 159, 53 |
| Conread position: | 1-190 |
| Cow position: | chr12:33851490-33851309 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-190 |
| Cow position: | chr12:33976337-33976147 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-190 |
| Cow position: | chr12:35240969-35241157 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-190 |
| Cow position: | chr12:42180994-42181181 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-194 |
| Cow position: | chr12:18021012-18020801 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 1-197 |
| Cow position: | chr12:22284987-22285181 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-197 |
| Cow position: | chr12:32169680-32169482 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 1-238 |
| Cow position: | chr12:22485947-22485697 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 242 |
| Conread position: | 1-256 |
| Cow position: | chr12:18123800-18123540 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 185, 45 |
| Conread position: | 1-256 |
| Cow position: | chr12:33129388-33129122 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 2-139 |
| Cow position: | chr12:1952672-1952803 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-147 |
| Cow position: | chr12:14223116-14222972 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 2-158 |
| Cow position: | chr12:25528428-25528580 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-174 |
| Cow position: | chr12:29180807-29180637 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 158, 55 |
| Conread position: | 2-184 |
| Cow position: | chr12:2734778-2734954 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-189 |
| Cow position: | chr12:15122458-15122273 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 158, 56 |
| Conread position: | 2-189 |
| Cow position: | chr12:18518805-18518621 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 183, 56 |
| Conread position: | 2-214 |
| Cow position: | chr12:48578968-48578766 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 183, 44 |
| Conread position: | 3-145 |
| Cow position: | chr12:3579616-3579478 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 138, 43 |
| Conread position: | 3-160 |
| Cow position: | chr12:6958351-6958197 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-179 |
| Cow position: | chr12:29731443-29731273 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 3-184 |
| Cow position: | chr12:3371415-3371588 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-184 |
| Cow position: | chr12:24437500-24437681 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-184 |
| Cow position: | chr12:26576024-26575850 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 3-186 |
| Cow position: | chr12:14986879-14986701 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-189 |
| Cow position: | chr12:17252071-17252249 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-189 |
| Cow position: | chr12:33949033-33948852 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 182, 54 |
| Conread position: | 3-189 |
| Cow position: | chr12:37770998-37770826 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-190 |
| Cow position: | chr12:6410604-6410787 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 3-190 |
| Cow position: | chr12:30919566-30919373 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 3-222 |
| Cow position: | chr12:42684807-42685028 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 199 |
| Conread position: | 4-129 |
| Cow position: | chr12:18978820-18978696 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-184 |
| Cow position: | chr12:5839527-5839702 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 4-186 |
| Cow position: | chr12:15429463-15429645 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 174, 69 |
| Conread position: | 4-189 |
| Cow position: | chr12:9143518-9143336 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-189 |
| Cow position: | chr12:9766747-9766928 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 146, 54 |
| Conread position: | 4-189 |
| Cow position: | chr12:16670400-16670216 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 4-189 |
| Cow position: | chr12:17879174-17879352 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 4-189 |
| Cow position: | chr12:18582865-18583043 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-189 |
| Cow position: | chr12:35669338-35669522 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 5-185 |
| Cow position: | chr12:19258409-19258233 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 6-189 |
| Cow position: | chr12:11057000-11056824 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 113, 48 |
| Conread position: | 6-222 |
| Cow position: | chr12:5554208-5554418 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 8-208 |
| Cow position: | chr12:19502291-19502498 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 9-189 |
| Cow position: | chr12:4008154-4008335 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 12-140 |
| Cow position: | chr12:41159712-41159585 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 18-189 |
| Cow position: | chr12:37514168-37514333 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 167, 38 |
| Conread position: | 19-237 |
| Cow position: | chr12:26868695-26868915 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 21-216 |
| Cow position: | chr12:27357495-27357299 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 129, 6 |
| Conread position: | 24-237 |
| Cow position: | chr12:38009977-38010180 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 169, 37 |
| Conread position: | 30-189 |
| Cow position: | chr12:45820259-45820417 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 40-189 |
| Cow position: | chr12:33319570-33319719 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 40-195 |
| Cow position: | chr12:32715142-32714989 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 43-189 |
| Cow position: | chr12:27037357-27037501 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 46-189 |
| Cow position: | chr12:19274306-19274448 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 46-237 |
| Cow position: | chr12:9413715-9413903 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 139 |
| Conread position: | 47-189 |
| Cow position: | chr12:15260854-15260711 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 48-237 |
| Cow position: | chr12:15240648-15240845 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 49-189 |
| Cow position: | chr12:26151371-26151511 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 50-184 |
| Cow position: | chr12:6485126-6485256 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 58-238 |
| Cow position: | chr12:25805052-25805232 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 111 |
| Conread position: | 64-221 |
| Cow position: | chr12:5906130-5905974 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 233-339 |
| Cow position: | chr12:6412329-6412432 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 241-339 |
| Cow position: | chr12:44014070-44014166 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 252-367 |
| Cow position: | chr12:37123274-37123158 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 254-337 |
| Cow position: | chr12:4341961-4342045 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 254-338 |
| Cow position: | chr12:45679890-45679806 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:15429841-15429926 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:18421168-18421252 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:18937146-18937061 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:19420173-19420258 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:20316748-20316832 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:26777394-26777478 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:30438009-30437925 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:30946590-30946505 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:34148592-34148677 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:36118729-36118645 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:39486188-39486104 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:43192427-43192512 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr12:44905395-44905311 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-366 |
| Cow position: | chr12:18123445-18123333 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 31 |
Show alignments to all cow chromosomes.