Cow genome map

Conread name: Ss1.1-Pig3-SRG8012F10.3

Conread position: 1-133
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 41

Conread position: 1-140
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-140
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 34

Conread position: 1-143
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 1-147
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 130

Conread position: 1-147
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 76

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-158
Cow position:
Alignm length: 158
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-158
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-164
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 48

Conread position: 1-175
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 1-183
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 154

Conread position: 1-183
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 146, 72

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 1-185
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 57

Conread position: 1-186
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-187
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-188
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 121, 45

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 15

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 184, 52

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 185, 0

Conread position: 1-189
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 128, 38

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 175, 44

Conread position: 1-189
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 80

Conread position: 1-189
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 179, 54

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 184, 39

Conread position: 1-190
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 84

Conread position: 1-190
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1-190
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 1-190
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 75

Conread position: 1-195
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-196
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 9

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 153, 44

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 31

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 138

Conread position: 1-222
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 144

Conread position: 1-222
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 138

Conread position: 1-222
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 157, 57

Conread position: 1-237
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 174, 44

Conread position: 1-250
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 190, 45

Conread position: 1-251
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 51

Conread position: 1-251
Cow position:
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-256
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 45

Conread position: 1-339
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 2-189
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 183, 66

Conread position: 2-195
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 2-226
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 182, 54

Conread position: 3-137
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-178
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 69

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 147
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 3-189
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 147, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 3-190
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 145, 0

Conread position: 3-197
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 135

Conread position: 3-222
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 133, 53

Conread position: 4-143
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 4-148
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 4-167
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 4-172
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 4-189
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 181, 69

Conread position: 4-189
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 70

Conread position: 4-195
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 4-195
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 4-197
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 142

Conread position: 4-208
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 4-219
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 4-222
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 4-237
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 4-237
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 151, 41

Conread position: 5-178
Cow position:
Alignm length: 174
Alignm identity: 141
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 5-208
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 49

Conread position: 6-184
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 7-176
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 8-147
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 12-256
Cow position:
Alignm length: 247
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 187, 34

Conread position: 29-181
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 31-185
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 33-158
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 39-191
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 40-188
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 84

Conread position: 40-189
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 97

Conread position: 40-189
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 40-222
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 41-146
Cow position:
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-216
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 28

Conread position: 45-189
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 133, 16

Conread position: 45-190
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 51-197
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 52-225
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 56-183
Cow position:
Alignm length: 128
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 58-222
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 143

Conread position: 62-237
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 166

Conread position: 63-189
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 63-196
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 46

Conread position: 75-189
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 241-339
Cow position:
Alignm length: 99
Alignm identity: 88
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 244-335
Cow position:
Alignm length: 94
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 244-338
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 244-339
Cow position:
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 244-339
Cow position:
Alignm length: 98
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 50

Conread position: 244-348
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 249-366
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 5

Conread position: 252-333
Cow position:
Alignm length: 82
Alignm identity: 74
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 253-339
Cow position:
Alignm length: 88
Alignm identity: 80
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 32

Conread position: 253-339
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-331
Cow position:
Alignm length: 78
Alignm identity: 72
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 254-337
Cow position:
Alignm length: 84
Alignm identity: 76
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 254-338
Cow position:
Alignm length: 85
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-338
Cow position:
Alignm length: 85
Alignm identity: 76
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 78
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 87
Alignm identity: 81
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 31

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-340
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-340
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 254-341
Cow position:
Alignm length: 88
Alignm identity: 77
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-348
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 256-339
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 257-339
Cow position:
Alignm length: 83
Alignm identity: 74
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.