Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8012F10.3 |
| Conread position: | 1-114 |
| Cow position: | chr21:13488791-13488678 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-114 |
| Cow position: | chr21:37479354-37479467 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr21:17857001-17856880 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-140 |
| Cow position: | chr21:24797891-24797754 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-143 |
| Cow position: | chr21:39845838-39845690 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-144 |
| Cow position: | chr21:8351058-8351197 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-144 |
| Cow position: | chr21:31462793-31462658 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-146 |
| Cow position: | chr21:13588998-13588854 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-146 |
| Cow position: | chr21:29418807-29418662 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-146 |
| Cow position: | chr21:37495708-37495852 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 127, 36 |
| Conread position: | 1-146 |
| Cow position: | chr21:44732807-44732949 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-146 |
| Cow position: | chr21:47713771-47713914 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 1-147 |
| Cow position: | chr21:868683-868831 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-147 |
| Cow position: | chr21:6042025-6041880 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 1-147 |
| Cow position: | chr21:27744265-27744118 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-148 |
| Cow position: | chr21:7460841-7460699 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-153 |
| Cow position: | chr21:48334549-48334704 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 1-160 |
| Cow position: | chr21:45376183-45376031 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-168 |
| Cow position: | chr21:11353299-11353132 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr21:20174548-20174380 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 1-180 |
| Cow position: | chr21:30658097-30657930 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-182 |
| Cow position: | chr21:8506311-8506488 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-182 |
| Cow position: | chr21:8509199-8509376 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-183 |
| Cow position: | chr21:16498751-16498576 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-183 |
| Cow position: | chr21:41287560-41287736 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-184 |
| Cow position: | chr21:3585128-3585312 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-184 |
| Cow position: | chr21:11182785-11182609 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-184 |
| Cow position: | chr21:24875588-24875408 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 154, 45 |
| Conread position: | 1-184 |
| Cow position: | chr21:40820615-40820797 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 153, 83 |
| Conread position: | 1-184 |
| Cow position: | chr21:41590330-41590509 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-189 |
| Cow position: | chr21:71822-71638 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 154, 53 |
| Conread position: | 1-189 |
| Cow position: | chr21:641820-641638 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-189 |
| Cow position: | chr21:8426679-8426497 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 1-189 |
| Cow position: | chr21:17252741-17252927 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 1-189 |
| Cow position: | chr21:20163943-20163759 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-189 |
| Cow position: | chr21:22851151-22850972 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-189 |
| Cow position: | chr21:29069087-29069277 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 1-189 |
| Cow position: | chr21:33982578-33982756 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-189 |
| Cow position: | chr21:34654306-34654124 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 184, 45 |
| Conread position: | 1-189 |
| Cow position: | chr21:39393984-39393799 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 1-189 |
| Cow position: | chr21:42135383-42135565 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-189 |
| Cow position: | chr21:44825639-44825839 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 1-189 |
| Cow position: | chr21:47464883-47465067 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-191 |
| Cow position: | chr21:32559135-32559317 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 1-194 |
| Cow position: | chr21:19868726-19868909 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-194 |
| Cow position: | chr21:45906385-45906577 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 1-195 |
| Cow position: | chr21:6851401-6851217 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-195 |
| Cow position: | chr21:37480200-37480000 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 57 |
| Conread position: | 1-196 |
| Cow position: | chr21:27568923-27569126 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 146 |
| Conread position: | 1-197 |
| Cow position: | chr21:24858552-24858357 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 183, 67 |
| Conread position: | 1-197 |
| Cow position: | chr21:47719068-47719257 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 180, 44 |
| Conread position: | 1-220 |
| Cow position: | chr21:11739883-11740099 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-232 |
| Cow position: | chr21:802087-802321 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 52 |
| Conread position: | 1-234 |
| Cow position: | chr21:11678086-11678305 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 1-237 |
| Cow position: | chr21:82295-82060 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 179, 15 |
| Conread position: | 1-237 |
| Cow position: | chr21:23822388-23822148 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 1-237 |
| Cow position: | chr21:32297272-32297526 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 51, 243 |
| Conread position: | 2-184 |
| Cow position: | chr21:25012313-25012138 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-187 |
| Cow position: | chr21:29001911-29002102 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 2-237 |
| Cow position: | chr21:742509-742266 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 137, 43 |
| Conread position: | 3-129 |
| Cow position: | chr21:3595802-3595924 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-137 |
| Cow position: | chr21:7424779-7424911 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 3-146 |
| Cow position: | chr21:23672979-23672839 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-147 |
| Cow position: | chr21:40930242-40930382 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-155 |
| Cow position: | chr21:6713290-6713438 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-184 |
| Cow position: | chr21:6051738-6051559 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-184 |
| Cow position: | chr21:38692437-38692256 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 3-184 |
| Cow position: | chr21:46599592-46599417 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-186 |
| Cow position: | chr21:28907315-28907491 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 3-189 |
| Cow position: | chr21:643557-643375 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-189 |
| Cow position: | chr21:828976-829157 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-189 |
| Cow position: | chr21:30222576-30222396 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 3-190 |
| Cow position: | chr21:18568403-18568589 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-195 |
| Cow position: | chr21:11644732-11644921 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-237 |
| Cow position: | chr21:27810626-27810389 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 135 |
| Conread position: | 3-238 |
| Cow position: | chr21:7824956-7825197 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 4-184 |
| Cow position: | chr21:15012667-15012495 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 146, 41 |
| Conread position: | 4-186 |
| Cow position: | chr21:39403295-39403471 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-189 |
| Cow position: | chr21:21616012-21615833 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 4-189 |
| Cow position: | chr21:29213922-29214110 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 4-189 |
| Cow position: | chr21:44251607-44251792 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 4-207 |
| Cow position: | chr21:24598879-24598691 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 146, 42 |
| Conread position: | 5-167 |
| Cow position: | chr21:13883714-13883554 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 49 |
| Conread position: | 6-140 |
| Cow position: | chr21:16119929-16120061 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 6-196 |
| Cow position: | chr21:41522177-41522368 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 6-220 |
| Cow position: | chr21:37299693-37299483 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 6-229 |
| Cow position: | chr21:14126503-14126276 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 12-184 |
| Cow position: | chr21:28030508-28030345 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 12-189 |
| Cow position: | chr21:30243460-30243630 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 13-155 |
| Cow position: | chr21:35569136-35569279 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 16-189 |
| Cow position: | chr21:38121325-38121152 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 16-192 |
| Cow position: | chr21:7169908-7169735 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 21-189 |
| Cow position: | chr21:9990727-9990561 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 29-189 |
| Cow position: | chr21:36682538-36682376 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 33-189 |
| Cow position: | chr21:12801540-12801698 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 39-171 |
| Cow position: | chr21:30622837-30622708 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 40-181 |
| Cow position: | chr21:5341895-5342035 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 40-189 |
| Cow position: | chr21:19359976-19360125 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-189 |
| Cow position: | chr21:29485178-29485033 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 42-195 |
| Cow position: | chr21:36297690-36297538 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 45-189 |
| Cow position: | chr21:30980385-30980526 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 46-191 |
| Cow position: | chr21:14228084-14228231 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 57-237 |
| Cow position: | chr21:33210371-33210183 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 214-339 |
| Cow position: | chr21:23984387-23984508 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 244-337 |
| Cow position: | chr21:34658907-34658812 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 244-337 |
| Cow position: | chr21:45971285-45971380 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 244-339 |
| Cow position: | chr21:81943-81846 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 244-340 |
| Cow position: | chr21:10151667-10151570 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 252-339 |
| Cow position: | chr21:12366250-12366163 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-339 |
| Cow position: | chr21:42348815-42348902 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-339 |
| Cow position: | chr21:47802397-47802486 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 253-339 |
| Cow position: | chr21:16612491-16612405 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-339 |
| Cow position: | chr21:23683412-23683326 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-340 |
| Cow position: | chr21:20162397-20162310 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-337 |
| Cow position: | chr21:32535837-32535754 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr21:13409962-13410047 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr21:17282564-17282479 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr21:28734051-28734136 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr21:33982948-33983034 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 254-339 |
| Cow position: | chr21:36163102-36163187 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 79 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr21:39888883-39888968 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr21:41974518-41974603 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-340 |
| Cow position: | chr21:45906-45821 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-340 |
| Cow position: | chr21:363516-363430 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-340 |
| Cow position: | chr21:20262473-20262559 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-340 |
| Cow position: | chr21:31159117-31159029 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 254-362 |
| Cow position: | chr21:30250348-30250456 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 254-362 |
| Cow position: | chr21:30257843-30257951 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-373 |
| Cow position: | chr21:24607246-24607125 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 254-378 |
| Cow position: | chr21:35899669-35899541 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 255-346 |
| Cow position: | chr21:33350602-33350510 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 256-339 |
| Cow position: | chr21:9416101-9416018 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 77 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-370 |
| Cow position: | chr21:5153476-5153360 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 259-339 |
| Cow position: | chr21:42540364-42540444 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 74 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.