Cow genome map

Conread name: Ss1.1-Pig3-SRG8012F10.3

Conread position: 1-122
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-130
Cow position:
Alignm length: 130
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1-142
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-144
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 17

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-146
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 1-147
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 76

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 78

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 1-158
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 149, 57

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 53

Conread position: 1-173
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-178
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 173, 23

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-183
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 51

Conread position: 1-183
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-184
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 41

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-184
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 51

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 115

Conread position: 1-189
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 45

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 49

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 185, 59

Conread position: 1-189
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 28

Conread position: 1-190
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-190
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 1-190
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 1-190
Cow position:
Alignm length: 190
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-190
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 1-190
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 147

Conread position: 1-192
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 71

Conread position: 1-211
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 17

Conread position: 1-219
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 159, 55

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 85, 54

Conread position: 1-222
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 1-232
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 185, 44

Conread position: 1-233
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 189, 36

Conread position: 1-234
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 156, 56

Conread position: 1-237
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 135

Conread position: 1-237
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 179, 45

Conread position: 1-246
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 1-255
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 193, 54

Conread position: 1-256
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 260

Conread position: 1-256
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 54, 215

Conread position: 1-256
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 82

Conread position: 1-257
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 29

Conread position: 1-261
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 228, 55

Conread position: 2-144
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 50

Conread position: 2-157
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 2-194
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 3-148
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 43

Conread position: 3-164
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 16

Conread position: 3-173
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 3-189
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 153

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 3-189
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 182, 28

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 3-194
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 3-197
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 3-206
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 177, 27

Conread position: 3-238
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 125, 16

Conread position: 3-238
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 177, 53

Conread position: 4-140
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 4-177
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 4-183
Cow position:
Alignm length: 180
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 4-188
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 29

Conread position: 4-189
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 4-189
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 176, 52

Conread position: 4-189
Cow position:
Alignm length: 188
Alignm identity: 153
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 55, 0

Conread position: 4-189
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 4-191
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 42

Conread position: 5-144
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 5-222
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 6-148
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 6-184
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 120

Conread position: 6-188
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 6-189
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 179, 40

Conread position: 6-256
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 31

Conread position: 7-172
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 8-144
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 38

Conread position: 8-170
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 10-148
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 10-187
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 12-237
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 147, 46

Conread position: 19-189
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 34-194
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 151, 12

Conread position: 40-186
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 140, 33

Conread position: 40-190
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 45-189
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 16

Conread position: 46-189
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 48-189
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 50-223
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 147

Conread position: 61-222
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 108

Conread position: 62-228
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 144

Conread position: 63-197
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 63-233
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 149, 0

Conread position: 69-197
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 229-339
Cow position:
Alignm length: 112
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 24

Conread position: 244-341
Cow position:
Alignm length: 100
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 49

Conread position: 247-339
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 252-339
Cow position:
Alignm length: 88
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 252-346
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 254-328
Cow position:
Alignm length: 75
Alignm identity: 70
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-335
Cow position:
Alignm length: 82
Alignm identity: 76
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-337
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 254-337
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 254-337
Cow position:
Alignm length: 85
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 254-338
Cow position:
Alignm length: 85
Alignm identity: 76
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 79
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 78
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-340
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-341
Cow position:
Alignm length: 88
Alignm identity: 81
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 256-339
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 256-339
Cow position:
Alignm length: 86
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 256-339
Cow position:
Alignm length: 84
Alignm identity: 77
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.