Cow genome map

Conread name: Ss1.1-Pig3-SRG8012F10.3

Conread position: 1-118
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 52

Conread position: 1-128
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-133
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 1-139
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-140
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 41

Conread position: 1-146
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 55

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-167
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 1-167
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-168
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 155, 45

Conread position: 1-177
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 1-177
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-178
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-183
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-186
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 175, 6

Conread position: 1-186
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 1-187
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 58

Conread position: 1-187
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 184, 45

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 1-189
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 179, 67

Conread position: 1-189
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 41, 25

Conread position: 1-189
Cow position:
Alignm length: 192
Alignm identity: 149
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 72, 45

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 57

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 184, 56

Conread position: 1-190
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 1-190
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 1-194
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 100

Conread position: 1-194
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-194
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 45

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 177, 42

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 1-204
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 1-218
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 57

Conread position: 1-222
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 1-222
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 115, 58

Conread position: 1-237
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 167, 45

Conread position: 1-237
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 159, 45

Conread position: 1-237
Cow position:
Alignm length: 251
Alignm identity: 190
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 164, 53

Conread position: 1-244
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 63, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 190, 44

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 160, 41

Conread position: 2-155
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 66

Conread position: 2-184
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 2-188
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 2-188
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 148, 73

Conread position: 2-256
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 178, 52

Conread position: 3-178
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 46

Conread position: 3-178
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 3-189
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 182, 51

Conread position: 3-237
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 4-184
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 157, 42

Conread position: 4-189
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 181, 42

Conread position: 4-189
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 4-189
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 181, 27

Conread position: 4-193
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 146, 53

Conread position: 4-222
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 4-222
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 4-237
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 116

Conread position: 5-189
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 5-193
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 175, 49

Conread position: 6-148
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 6-184
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 6-189
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 144, 50

Conread position: 6-189
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 50

Conread position: 8-146
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 8-189
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 68

Conread position: 9-167
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 9-195
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 38

Conread position: 18-256
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 9

Conread position: 19-197
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 136, 35

Conread position: 21-183
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 8

Conread position: 21-190
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 37-189
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 40-189
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 40-190
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 40-229
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 43-189
Cow position:
Alignm length: 147
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 51-237
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 54-222
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 60-251
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 126, 0

Conread position: 63-178
Cow position:
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 63-181
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 63-251
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 91

Conread position: 75-189
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 75-189
Cow position:
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 210-339
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 17

Conread position: 240-339
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 240-340
Cow position:
Alignm length: 101
Alignm identity: 89
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 244-328
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 244-339
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 244-339
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 244-339
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 43

Conread position: 247-335
Cow position:
Alignm length: 89
Alignm identity: 81
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 252-333
Cow position:
Alignm length: 82
Alignm identity: 73
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 252-337
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 253-340
Cow position:
Alignm length: 88
Alignm identity: 79
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 78
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 80
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 80
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 254-340
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 254-341
Cow position:
Alignm length: 88
Alignm identity: 79
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-346
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 254-346
Cow position:
Alignm length: 94
Alignm identity: 84
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 254-365
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 31

Conread position: 254-378
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 254-381
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 64

Conread position: 255-341
Cow position:
Alignm length: 87
Alignm identity: 81
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.