Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8012F10.3 |
| Conread position: | 1-118 |
| Cow position: | chr25:13470541-13470658 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-125 |
| Cow position: | chr25:30709175-30709299 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 1-128 |
| Cow position: | chr25:17141273-17141148 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-133 |
| Cow position: | chr25:22571129-22570999 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-139 |
| Cow position: | chr25:3992950-3992814 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-140 |
| Cow position: | chr25:15999380-15999518 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 1-146 |
| Cow position: | chr25:14949641-14949783 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 1-147 |
| Cow position: | chr25:14849480-14849626 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:1802781-1802637 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:4157077-4157220 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:7673477-7673327 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:18934466-18934609 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:31657110-31657251 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-164 |
| Cow position: | chr25:12305449-12305286 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-164 |
| Cow position: | chr25:15349739-15349895 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-164 |
| Cow position: | chr25:23323667-23323500 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-165 |
| Cow position: | chr25:22734176-22734017 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-167 |
| Cow position: | chr25:24115145-24115309 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-167 |
| Cow position: | chr25:35902917-35902754 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-168 |
| Cow position: | chr25:14210146-14209989 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 1-177 |
| Cow position: | chr25:8347823-8347649 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-177 |
| Cow position: | chr25:18720957-18721123 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-178 |
| Cow position: | chr25:9573965-9574134 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-183 |
| Cow position: | chr25:13826601-13826426 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-184 |
| Cow position: | chr25:19130024-19129845 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-184 |
| Cow position: | chr25:20203078-20202903 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-184 |
| Cow position: | chr25:26072393-26072567 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-186 |
| Cow position: | chr25:7380668-7380852 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 175, 6 |
| Conread position: | 1-186 |
| Cow position: | chr25:13443237-13443423 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 1-187 |
| Cow position: | chr25:16372723-16372538 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 1-187 |
| Cow position: | chr25:22315374-22315191 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 184, 45 |
| Conread position: | 1-189 |
| Cow position: | chr25:1840491-1840309 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:3744564-3744760 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:4521671-4521852 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:13223068-13222885 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:19679522-19679340 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:22298802-22298622 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:23244834-23245017 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:23828960-23829143 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-189 |
| Cow position: | chr25:26306033-26306220 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 179, 67 |
| Conread position: | 1-189 |
| Cow position: | chr25:28597434-28597628 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 1-189 |
| Cow position: | chr25:33550681-33550494 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 72, 45 |
| Conread position: | 1-189 |
| Cow position: | chr25:35339020-35339205 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 1-189 |
| Cow position: | chr25:36873167-36873349 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 184, 56 |
| Conread position: | 1-190 |
| Cow position: | chr25:11585699-11585502 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-190 |
| Cow position: | chr25:13272739-13272553 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-194 |
| Cow position: | chr25:12195050-12195247 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 1-194 |
| Cow position: | chr25:33557436-33557255 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-194 |
| Cow position: | chr25:41150794-41150986 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 1-197 |
| Cow position: | chr25:21668418-21668225 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 177, 42 |
| Conread position: | 1-197 |
| Cow position: | chr25:22348288-22348486 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-204 |
| Cow position: | chr25:36073829-36074026 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-218 |
| Cow position: | chr25:2414967-2414746 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 1-222 |
| Cow position: | chr25:6682880-6683110 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-222 |
| Cow position: | chr25:19363890-19364106 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-222 |
| Cow position: | chr25:35762758-35762544 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 115, 58 |
| Conread position: | 1-237 |
| Cow position: | chr25:2624964-2624724 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 167, 45 |
| Conread position: | 1-237 |
| Cow position: | chr25:7306460-7306217 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 159, 45 |
| Conread position: | 1-237 |
| Cow position: | chr25:24669282-24669521 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 1-244 |
| Cow position: | chr25:9989932-9990190 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-256 |
| Cow position: | chr25:2111206-2110967 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 190, 44 |
| Conread position: | 1-256 |
| Cow position: | chr25:7441179-7440922 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 160, 41 |
| Conread position: | 2-155 |
| Cow position: | chr25:21082237-21082390 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 66 |
| Conread position: | 2-184 |
| Cow position: | chr25:33457898-33457722 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-188 |
| Cow position: | chr25:13823550-13823733 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-188 |
| Cow position: | chr25:20008303-20008117 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 148, 73 |
| Conread position: | 2-256 |
| Cow position: | chr25:4245834-4245580 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 178, 52 |
| Conread position: | 3-178 |
| Cow position: | chr25:9025291-9025119 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 3-178 |
| Cow position: | chr25:30852933-30852763 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-189 |
| Cow position: | chr25:7008088-7007897 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 3-189 |
| Cow position: | chr25:26679395-26679211 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-205 |
| Cow position: | chr25:36746280-36746480 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 182, 51 |
| Conread position: | 3-237 |
| Cow position: | chr25:36872531-36872277 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 4-184 |
| Cow position: | chr25:15715039-15714863 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 157, 42 |
| Conread position: | 4-189 |
| Cow position: | chr25:5637219-5637401 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 181, 42 |
| Conread position: | 4-189 |
| Cow position: | chr25:9107363-9107539 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-189 |
| Cow position: | chr25:13768128-13767955 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 181, 27 |
| Conread position: | 4-193 |
| Cow position: | chr25:28667880-28668071 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 4-222 |
| Cow position: | chr25:9843350-9843128 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-222 |
| Cow position: | chr25:30279027-30279256 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 4-237 |
| Cow position: | chr25:7799721-7799468 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 5-189 |
| Cow position: | chr25:18288604-18288783 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 5-193 |
| Cow position: | chr25:13621196-13621376 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 175, 49 |
| Conread position: | 6-148 |
| Cow position: | chr25:7684734-7684872 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-184 |
| Cow position: | chr25:36872890-36873066 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 6-189 |
| Cow position: | chr25:7750614-7750437 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 144, 50 |
| Conread position: | 6-189 |
| Cow position: | chr25:24573228-24573053 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 8-146 |
| Cow position: | chr25:6782023-6781890 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 8-189 |
| Cow position: | chr25:20785422-20785601 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 9-167 |
| Cow position: | chr25:15573551-15573395 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 9-195 |
| Cow position: | chr25:32277451-32277626 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 18-256 |
| Cow position: | chr25:15254191-15254441 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 19-197 |
| Cow position: | chr25:34978716-34978885 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 136, 35 |
| Conread position: | 21-183 |
| Cow position: | chr25:12609497-12609334 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 21-190 |
| Cow position: | chr25:36717066-36716905 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 37-189 |
| Cow position: | chr25:23505191-23505037 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 40-189 |
| Cow position: | chr25:22531415-22531268 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 40-190 |
| Cow position: | chr25:34170080-34169931 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 40-229 |
| Cow position: | chr25:30624947-30625143 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 43-189 |
| Cow position: | chr25:15463718-15463572 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-237 |
| Cow position: | chr25:12899850-12899672 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 54-222 |
| Cow position: | chr25:25051257-25051426 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 60-251 |
| Cow position: | chr25:30064799-30064985 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 63-178 |
| Cow position: | chr25:34967398-34967513 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-181 |
| Cow position: | chr25:23998813-23998931 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-251 |
| Cow position: | chr25:35076605-35076788 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 75-189 |
| Cow position: | chr25:4547619-4547733 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 75-189 |
| Cow position: | chr25:17975279-17975393 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-339 |
| Cow position: | chr25:3992628-3992500 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 240-339 |
| Cow position: | chr25:6226848-6226751 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 240-340 |
| Cow position: | chr25:25051577-25051675 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 244-328 |
| Cow position: | chr25:21191294-21191208 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 244-339 |
| Cow position: | chr25:3969203-3969106 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 244-339 |
| Cow position: | chr25:7216635-7216538 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 244-339 |
| Cow position: | chr25:21245800-21245896 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 247-335 |
| Cow position: | chr25:8347309-8347223 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-333 |
| Cow position: | chr25:20348655-20348574 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 73 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-337 |
| Cow position: | chr25:1096374-1096289 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 253-340 |
| Cow position: | chr25:16064692-16064606 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:7800931-7800846 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 78 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:8120571-8120487 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:9349462-9349547 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:12817167-12817083 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:14117904-14117819 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:14255350-14255266 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 78 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:17658409-17658325 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:30319654-30319739 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:30816620-30816535 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-339 |
| Cow position: | chr25:32278234-32278319 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-340 |
| Cow position: | chr25:36119996-36119910 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-341 |
| Cow position: | chr25:22531082-22530995 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 79 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-346 |
| Cow position: | chr25:8485740-8485833 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 254-346 |
| Cow position: | chr25:22549819-22549912 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 254-365 |
| Cow position: | chr25:13840324-13840435 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 254-378 |
| Cow position: | chr25:33959465-33959595 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 254-381 |
| Cow position: | chr25:9842796-9842666 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 255-341 |
| Cow position: | chr25:5341444-5341359 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.