Cow genome map

Conread name: Ss1.1-Pig3-SRG8012F10.3

Conread position: 1-143
Cow position: chr26:29900872-29901011 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-144
Cow position: chr26:22798965-22799107 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 1-146
Cow position: chr26:2930065-2930212 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 1-147
Cow position: chr26:6823348-6823205 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-147
Cow position: chr26:21320134-21319992 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-158
Cow position: chr26:13705580-13705742 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 85

Conread position: 1-158
Cow position: chr26:18825095-18825250 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 149, 57

Conread position: 1-163
Cow position: chr26:10700715-10700872 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr26:33112197-33112367 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 56

Conread position: 1-184
Cow position: chr26:9535702-9535527 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 166, 45

Conread position: 1-184
Cow position: chr26:16435461-16435647 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-187
Cow position: chr26:34060524-34060339 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-188
Cow position: chr26:12940596-12940405 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 5

Conread position: 1-189
Cow position: chr26:647534-647719 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 153, 0

Conread position: 1-189
Cow position: chr26:12144928-12145115 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 179, 67

Conread position: 1-189
Cow position: chr26:13802297-13802117 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 1-189
Cow position: chr26:16784013-16783827 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 44

Conread position: 1-189
Cow position: chr26:19591667-19591487 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-189
Cow position: chr26:20291504-20291688 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position: chr26:24240872-24240684 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 61, 7

Conread position: 1-189
Cow position: chr26:31888918-31888737 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 1-189
Cow position: chr26:32897691-32897866 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 183, 45

Conread position: 1-189
Cow position: chr26:33201882-33202066 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 1-189
Cow position: chr26:34610998-34611177 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1-196
Cow position: chr26:19446326-19446130 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 36

Conread position: 1-222
Cow position: chr26:5836629-5836847 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 45

Conread position: 1-222
Cow position: chr26:9492107-9491897 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-222
Cow position: chr26:12964493-12964723 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 147

Conread position: 1-222
Cow position: chr26:28423474-28423259 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 1-234
Cow position: chr26:20824934-20825172 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 134, 56

Conread position: 2-125
Cow position: chr26:13292863-13292739 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 2-189
Cow position: chr26:7314816-7314626 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 2-189
Cow position: chr26:20770038-20769854 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 178, 57

Conread position: 2-190
Cow position: chr26:22901066-22901258 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 154

Conread position: 2-211
Cow position: chr26:32566197-32565992 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 186, 44

Conread position: 3-170
Cow position: chr26:33038039-33038200 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 3-172
Cow position: chr26:15132827-15132658 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 78

Conread position: 3-178
Cow position: chr26:13862852-13863019 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 3-189
Cow position: chr26:27491309-27491494 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 135

Conread position: 3-190
Cow position: chr26:4585025-4585207 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 3-190
Cow position: chr26:4854730-4854548 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 3-191
Cow position: chr26:32563536-32563351 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 73

Conread position: 3-193
Cow position: chr26:28251340-28251152 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 157, 22

Conread position: 3-195
Cow position: chr26:7687056-7687247 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 3-207
Cow position: chr26:22892261-22892459 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 4-145
Cow position: chr26:29897372-29897235 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 4-148
Cow position: chr26:30127807-30127957 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 4-184
Cow position: chr26:14175482-14175291 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 4-188
Cow position: chr26:33392587-33392398 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 26

Conread position: 4-189
Cow position: chr26:11875036-11875217 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 4-189
Cow position: chr26:34724689-34724867 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 4-190
Cow position: chr26:32670313-32670492 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 177, 50

Conread position: 4-196
Cow position: chr26:33736370-33736557 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 4-197
Cow position: chr26:5666227-5666044 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 8

Conread position: 4-222
Cow position: chr26:19636476-19636263 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 22

Conread position: 4-222
Cow position: chr26:34559986-34560197 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 184, 54

Conread position: 6-146
Cow position: chr26:10502913-10502776 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 48

Conread position: 6-189
Cow position: chr26:107229-107029 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 10-148
Cow position: chr26:6487612-6487746 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 10-252
Cow position: chr26:8307347-8307609 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 154, 48

Conread position: 13-238
Cow position: chr26:31137290-31137521 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 45

Conread position: 29-165
Cow position: chr26:829969-829833 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 29-189
Cow position: chr26:31605576-31605410 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 35-190
Cow position: chr26:23315929-23315776 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 7

Conread position: 40-189
Cow position: chr26:33242040-33241893 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 41-171
Cow position: chr26:28410136-28410005 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 43-189
Cow position: chr26:677832-677976 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 45-218
Cow position: chr26:6337938-6337755 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 173

Conread position: 47-189
Cow position: chr26:13292665-13292522 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 57-237
Cow position: chr26:7955358-7955538 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 99

Conread position: 58-189
Cow position: chr26:21636903-21637033 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 63-189
Cow position: chr26:13021015-13021142 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 238-339
Cow position: chr26:30569053-30569151 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 240-339
Cow position: chr26:11263463-11263366 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 244-338
Cow position: chr26:11134871-11134966 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 244-339
Cow position: chr26:29716899-29716803 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 65

Conread position: 244-346
Cow position: chr26:15857502-15857397 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 252-339
Cow position: chr26:4444516-4444603 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-334
Cow position: chr26:30752050-30752130 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 75
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 254-336
Cow position: chr26:13021335-13021418 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 254-337
Cow position: chr26:20256660-20256576 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 254-339
Cow position: chr26:1329359-1329273 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 254-339
Cow position: chr26:6188110-6188025 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr26:6323479-6323394 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr26:8352772-8352688 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 254-339
Cow position: chr26:13270864-13270949 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr26:14174110-14174025 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-349
Cow position: chr26:18231180-18231087 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 254-363
Cow position: chr26:22180314-22180205 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 98

Conread position: 255-339
Cow position: chr26:4363117-4363034 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 259-337
Cow position: chr26:25737280-25737202 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 71
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.