Cow genome map

Conread name: Ss1.1-Pig3-SRG8012F10.3

Conread position: 1-124
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-125
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-137
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 103

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 1-145
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 41

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-147
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 38

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-147
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-147
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 1-148
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1-152
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 45

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 1-163
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 154, 14

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 1-164
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 53

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 28

Conread position: 1-174
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-180
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position:
Alignm length: 180
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-183
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 45

Conread position: 1-183
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 61

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 1-185
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 46, 169

Conread position: 1-186
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 1-189
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-189
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 184, 55

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 43

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 1-189
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 71

Conread position: 1-189
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 133

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-190
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 44

Conread position: 1-195
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 1-195
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 47

Conread position: 1-196
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 179, 57

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 184, 67

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 177, 44

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-214
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 147

Conread position: 1-222
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 203

Conread position: 1-233
Cow position:
Alignm length: 240
Alignm identity: 159
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 118

Conread position: 1-256
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 167, 44

Conread position: 2-137
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 2-164
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-189
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 178, 127

Conread position: 2-197
Cow position:
Alignm length: 198
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 18

Conread position: 2-222
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 127

Conread position: 2-224
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 55

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 3-146
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 3-147
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 3-148
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 3-167
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 3-176
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 3-184
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 3-184
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 3-184
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 3-188
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 3-189
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 182, 43

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 3-189
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 116

Conread position: 4-137
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 4-146
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 134, 0

Conread position: 4-147
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 40

Conread position: 4-183
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 139, 50

Conread position: 4-189
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 102, 64

Conread position: 4-189
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 4-189
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 52

Conread position: 4-189
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 4-195
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 4-195
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 4-206
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 146

Conread position: 4-207
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 97

Conread position: 4-237
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 160, 54

Conread position: 5-193
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 6-161
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-184
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 6-186
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 157, 52

Conread position: 6-189
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 53

Conread position: 6-189
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 6-237
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 13-166
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 33

Conread position: 18-256
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 26

Conread position: 29-192
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 82, 29

Conread position: 30-198
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 29, 45

Conread position: 37-257
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 191, 21

Conread position: 46-193
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 68

Conread position: 47-237
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 48-167
Cow position:
Alignm length: 121
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 214-339
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 240-339
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 244-337
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 35

Conread position: 244-339
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 244-373
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 70

Conread position: 252-335
Cow position:
Alignm length: 84
Alignm identity: 76
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 253-329
Cow position:
Alignm length: 77
Alignm identity: 70
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 253-339
Cow position:
Alignm length: 87
Alignm identity: 77
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-328
Cow position:
Alignm length: 75
Alignm identity: 69
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-337
Cow position:
Alignm length: 85
Alignm identity: 76
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 254-337
Cow position:
Alignm length: 84
Alignm identity: 74
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-338
Cow position:
Alignm length: 85
Alignm identity: 76
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 76
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 80
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 80
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 254-339
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-340
Cow position:
Alignm length: 87
Alignm identity: 81
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 254-340
Cow position:
Alignm length: 87
Alignm identity: 75
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-349
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 255-339
Cow position:
Alignm length: 85
Alignm identity: 75
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 255-339
Cow position:
Alignm length: 85
Alignm identity: 75
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 255-341
Cow position:
Alignm length: 87
Alignm identity: 78
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 256-339
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 257-340
Cow position:
Alignm length: 84
Alignm identity: 75
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 259-339
Cow position:
Alignm length: 81
Alignm identity: 73
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.