Cow genome map

Conread name: Ss1.1-Pig3-SRG8012F10.3

Conread position: 1-129
Cow position: chr6:53235441-53235566 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-134
Cow position: chr6:54406590-54406718 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 1-140
Cow position: chr6:40682456-40682590 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-142
Cow position: chr6:7291523-7291389 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-142
Cow position: chr6:8726889-8726751 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-146
Cow position: chr6:36570678-36570529 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 1-146
Cow position: chr6:63182497-63182358 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-147
Cow position: chr6:21004892-21004745 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-147
Cow position: chr6:36225322-36225177 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 75

Conread position: 1-147
Cow position: chr6:48379399-48379545 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-148
Cow position: chr6:32006244-32006387 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-148
Cow position: chr6:54821046-54820899 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr6:57467811-57467652 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr6:38033070-38032910 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 139, 45

Conread position: 1-163
Cow position: chr6:60186442-60186610 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-164
Cow position: chr6:15243051-15242888 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-167
Cow position: chr6:21083329-21083492 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-167
Cow position: chr6:21350819-21350984 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 54

Conread position: 1-176
Cow position: chr6:41657477-41657307 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-178
Cow position: chr6:3936999-3936822 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 144

Conread position: 1-178
Cow position: chr6:36537151-36537323 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-181
Cow position: chr6:18117839-18118014 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 1-181
Cow position: chr6:24468187-24468361 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 1-182
Cow position: chr6:46282780-46282970 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 32

Conread position: 1-183
Cow position: chr6:5601912-5601735 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 58

Conread position: 1-183
Cow position: chr6:42034982-42034805 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 145, 44

Conread position: 1-183
Cow position: chr6:53024599-53024771 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 154, 45

Conread position: 1-184
Cow position: chr6:16091109-16090935 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 1-184
Cow position: chr6:21470220-21470397 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 1-184
Cow position: chr6:25614878-25615063 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 132, 57

Conread position: 1-184
Cow position: chr6:65871243-65871069 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-188
Cow position: chr6:38207274-38207462 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 9

Conread position: 1-189
Cow position: chr6:1870985-1871172 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 184, 58

Conread position: 1-189
Cow position: chr6:1941622-1941806 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 126, 56

Conread position: 1-189
Cow position: chr6:2078604-2078788 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-189
Cow position: chr6:5609230-5609418 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 163

Conread position: 1-189
Cow position: chr6:8966300-8966124 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position: chr6:12623721-12623541 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 180, 43

Conread position: 1-189
Cow position: chr6:13653557-13653380 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-189
Cow position: chr6:13687604-13687785 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-189
Cow position: chr6:15305783-15305598 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 135, 0

Conread position: 1-189
Cow position: chr6:18903825-18904024 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 181

Conread position: 1-189
Cow position: chr6:21456465-21456656 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 90

Conread position: 1-189
Cow position: chr6:26155359-26155175 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-189
Cow position: chr6:36203033-36202847 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 59

Conread position: 1-189
Cow position: chr6:36920763-36920947 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-189
Cow position: chr6:38853444-38853632 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-189
Cow position: chr6:50504668-50504482 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 184, 41

Conread position: 1-189
Cow position: chr6:51581043-51581225 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-189
Cow position: chr6:57079638-57079450 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 72

Conread position: 1-189
Cow position: chr6:58725579-58725397 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-189
Cow position: chr6:59603003-59603181 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-189
Cow position: chr6:60143987-60144171 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-189
Cow position: chr6:60273798-60273984 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 53

Conread position: 1-189
Cow position: chr6:63066049-63065853 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 1-190
Cow position: chr6:143166-143348 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-190
Cow position: chr6:1704009-1703830 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 1-190
Cow position: chr6:15937640-15937829 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-190
Cow position: chr6:21293286-21293470 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 149, 53

Conread position: 1-194
Cow position: chr6:54133023-54132837 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 149, 29

Conread position: 1-195
Cow position: chr6:53546241-53546056 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 1-197
Cow position: chr6:693933-694132 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 53

Conread position: 1-197
Cow position: chr6:7128192-7128384 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 1-197
Cow position: chr6:32867009-32867198 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 145, 28

Conread position: 1-197
Cow position: chr6:47520266-47520072 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 1-197
Cow position: chr6:68816383-68816186 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 137

Conread position: 1-218
Cow position: chr6:12761492-12761272 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 189, 9

Conread position: 1-222
Cow position: chr6:31535361-31535575 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 56

Conread position: 1-237
Cow position: chr6:4383686-4383443 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 173, 44

Conread position: 1-237
Cow position: chr6:55282078-55282330 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 39

Conread position: 1-256
Cow position: chr6:29485295-29485022 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 44

Conread position: 1-256
Cow position: chr6:31228955-31228700 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 125

Conread position: 2-137
Cow position: chr6:2757993-2757863 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 2-144
Cow position: chr6:34569627-34569479 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 86

Conread position: 2-147
Cow position: chr6:46558265-46558126 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 2-184
Cow position: chr6:67643478-67643659 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 2-189
Cow position: chr6:3351239-3351055 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 2-189
Cow position: chr6:61109993-61109814 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 53

Conread position: 2-220
Cow position: chr6:39358132-39358348 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 152, 54

Conread position: 3-141
Cow position: chr6:2014335-2014203 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 3-148
Cow position: chr6:14383886-14383743 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 3-148
Cow position: chr6:34423250-34423391 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 3-167
Cow position: chr6:2547465-2547304 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 3-188
Cow position: chr6:6965184-6965369 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 107

Conread position: 3-188
Cow position: chr6:69334106-69334282 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 42

Conread position: 3-189
Cow position: chr6:20097747-20097932 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 19

Conread position: 3-189
Cow position: chr6:26915538-26915358 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 3-189
Cow position: chr6:46466028-46465847 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 182, 42

Conread position: 3-189
Cow position: chr6:58459927-58459748 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 3-189
Cow position: chr6:60517048-60516853 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 138

Conread position: 3-190
Cow position: chr6:23401785-23401966 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 3-237
Cow position: chr6:61644646-61644875 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 0

Conread position: 3-250
Cow position: chr6:61168975-61168713 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 165

Conread position: 3-256
Cow position: chr6:13040663-13040389 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 18

Conread position: 4-146
Cow position: chr6:57546017-57546158 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 135, 0

Conread position: 4-148
Cow position: chr6:50577727-50577588 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 4-151
Cow position: chr6:35743192-35743043 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 33

Conread position: 4-158
Cow position: chr6:30895781-30895932 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 78

Conread position: 4-183
Cow position: chr6:44194344-44194516 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 4-183
Cow position: chr6:67451159-67451338 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-184
Cow position: chr6:46859961-46860135 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 4-188
Cow position: chr6:67069603-67069787 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 42

Conread position: 4-189
Cow position: chr6:120449-120274 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 4-189
Cow position: chr6:10105771-10105952 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 4-189
Cow position: chr6:17068443-17068621 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 4-189
Cow position: chr6:30024089-30023912 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 4-189
Cow position: chr6:48097391-48097577 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 107, 41

Conread position: 4-189
Cow position: chr6:53460362-53460540 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 51

Conread position: 4-190
Cow position: chr6:6060362-6060546 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 4-190
Cow position: chr6:38640443-38640259 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 4-193
Cow position: chr6:45690406-45690586 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 4-194
Cow position: chr6:19264289-19264478 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 180, 64

Conread position: 4-196
Cow position: chr6:15243471-15243275 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 4-222
Cow position: chr6:17414238-17414453 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 146, 26

Conread position: 6-155
Cow position: chr6:35341975-35342121 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 39

Conread position: 6-184
Cow position: chr6:36196411-36196242 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 6

Conread position: 6-189
Cow position: chr6:23696206-23696027 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 49

Conread position: 6-234
Cow position: chr6:18954880-18955105 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 117, 48

Conread position: 8-189
Cow position: chr6:61523999-61524178 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 9-148
Cow position: chr6:154682-154537 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 9-181
Cow position: chr6:61269515-61269347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 78, 49

Conread position: 16-189
Cow position: chr6:52478214-52478384 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 16-189
Cow position: chr6:57571675-57571506 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 18-237
Cow position: chr6:1866922-1866717 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 21-184
Cow position: chr6:17794567-17794732 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 29-189
Cow position: chr6:48112380-48112224 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 33-237
Cow position: chr6:46571287-46571074 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 145, 35

Conread position: 36-219
Cow position: chr6:54471749-54471933 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 103

Conread position: 40-184
Cow position: chr6:23465859-23466001 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 40-189
Cow position: chr6:8209430-8209577 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 40-251
Cow position: chr6:1002087-1002296 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 34

Conread position: 41-190
Cow position: chr6:61569803-61569658 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 47-189
Cow position: chr6:51463465-51463607 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 139, 56

Conread position: 49-172
Cow position: chr6:28900493-28900370 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 52-208
Cow position: chr6:49398456-49398611 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 58-189
Cow position: chr6:9452611-9452743 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 58-194
Cow position: chr6:66570598-66570461 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 59-189
Cow position: chr6:19259185-19259315 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 59-221
Cow position: chr6:12551427-12551265 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 90

Conread position: 61-189
Cow position: chr6:28976885-28977013 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 62-190
Cow position: chr6:66375180-66375307 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 62-234
Cow position: chr6:47575060-47574887 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 162, 137

Conread position: 62-237
Cow position: chr6:29248631-29248448 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 92

Conread position: 66-237
Cow position: chr6:15922882-15923042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 68-189
Cow position: chr6:60350144-60350265 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 220-339
Cow position: chr6:57411519-57411398 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 68

Conread position: 229-339
Cow position: chr6:40032052-40031946 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 240-340
Cow position: chr6:68272279-68272378 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 18

Conread position: 244-339
Cow position: chr6:9732982-9733079 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 244-339
Cow position: chr6:12337833-12337737 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 43

Conread position: 244-339
Cow position: chr6:35181404-35181501 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 87
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 249-340
Cow position: chr6:54132659-54132570 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 82
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 250-339
Cow position: chr6:13687970-13688059 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 80
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 252-335
Cow position: chr6:32125906-32125823 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 252-339
Cow position: chr6:66363405-66363492 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 253-339
Cow position: chr6:32916082-32916168 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 80
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 254-332
Cow position: chr6:61113587-61113509 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 72
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-337
Cow position: chr6:9375537-9375620 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 78
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 254-338
Cow position: chr6:12845153-12845070 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 79
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 254-338
Cow position: chr6:13741532-13741450 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 80
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 254-338
Cow position: chr6:56849855-56849771 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:1770358-1770443 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:2012856-2012771 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:6060720-6060805 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:21534896-21534811 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:24327301-24327383 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 254-339
Cow position: chr6:29210338-29210254 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 254-339
Cow position: chr6:33451804-33451719 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:47540363-47540278 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:53401206-53401123 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 254-339
Cow position: chr6:55607969-55608054 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:62015482-62015397 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:65676094-65676009 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:65711664-65711579 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 254-339
Cow position: chr6:67044807-67044722 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 79
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 254-340
Cow position: chr6:15242671-15242587 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 254-363
Cow position: chr6:61443266-61443377 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 254-373
Cow position: chr6:51835237-51835117 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 256-337
Cow position: chr6:21587586-21587667 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 73
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 256-339
Cow position: chr6:16397347-16397430 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 256-339
Cow position: chr6:18988051-18987969 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 256-339
Cow position: chr6:23695832-23695750 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 77
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 256-339
Cow position: chr6:24031210-24031127 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 257-340
Cow position: chr6:59597491-59597408 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 76
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 258-336
Cow position: chr6:48468637-48468558 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 74
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.