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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8012F10.3
        

               
Conread position:
               
1-129
               

               
Cow position:
               
chr9:30194868-30194993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr9:12268891-12269023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr9:53323930-53323791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr9:44918421-44918283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr9:2037293-2037439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr9:20579731-20579595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr9:4263232-4263090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr9:22447438-22447294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr9:28315281-28315429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr9:41470244-41470098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr9:47214693-47214545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr9:11209596-11209444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr9:23840548-23840393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr9:34264940-34265096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr9:45740287-45740141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr9:54630170-54630311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr9:61301120-61300976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr9:11380788-11380644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr9:19771219-19771378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr9:32052133-32052293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr9:40603524-40603685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr9:40984361-40984522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr9:55807491-55807648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr9:1712851-1712686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr9:5187003-5186847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr9:32877915-32878074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr9:59897453-59897609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr9:26394491-26394325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr9:19718477-19718314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr9:34707453-34707282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr9:33151606-33151773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr9:34024556-34024734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr9:4241264-4241443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr9:29006416-29006594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr9:37198984-37199164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr9:41785078-41785247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr9:42586691-42586519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr9:53762556-53762736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
149, 44
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:8629055-8628876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:9686561-9686372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:12910543-12910358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 55
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:13169808-13169621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:17840822-17840635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 67
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:17872250-17872067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
184, 55
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:19067626-19067824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:21460296-21460111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:24887062-24887248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:28747661-28747478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:29195175-29194982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:34689748-34689557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:34958195-34958014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:41728117-41728301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
184, 45
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:45141739-45141558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:45285682-45285492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:53109108-53109292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:55354449-55354653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:56453203-56453378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr9:60395192-60395006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:12337757-12337945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:13670493-13670677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:22165860-22165670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:26477069-26477259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:41282869-41283058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:64105760-64105942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr9:33219100-33218911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr9:34375070-34374878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr9:38792872-38793064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr9:48627880-48628076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr9:36491047-36490850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr9:51620301-51620491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
181, 38
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:6192600-6192410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr9:5104553-5104353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr9:23388823-23388606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr9:55256692-55256478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr9:9459846-9460076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr9:11098594-11098375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 51
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:36627979-36628202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr9:4341299-4341058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
185, 38
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr9:22440616-22440398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr9:27345732-27345493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 223
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr9:61022478-61022722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
149, 74
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr9:28772998-28773234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 15
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr9:33101248-33101024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
164, 38
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr9:64310922-64310671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 141
               

               
Conread position:
               
2-164
               

               
Cow position:
               
chr9:52998522-52998363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr9:43202193-43202367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr9:55795616-55795798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
182, 60
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr9:58132091-58131855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
190, 54
               

               
Conread position:
               
3-125
               

               
Cow position:
               
chr9:4244284-4244406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-140
               

               
Cow position:
               
chr9:29339453-29339320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chr9:5172675-5172534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr9:6237631-6237488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chr9:24079164-24079319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr9:12773553-12773715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr9:44944614-44944453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr9:33584825-33584652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr9:52518962-52518786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr9:10144626-10144437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr9:33822975-33823160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr9:34286657-34286841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr9:9551951-9552133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr9:23956118-23955930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr9:9596091-9595843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr9:30123789-30124032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr9:34666311-34666555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr9:5357877-5358010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr9:39011610-39011432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr9:20090919-20091089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr9:33120031-33119846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr9:43757401-43757583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr9:16300717-16300526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr9:43159612-43159844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr9:6189503-6189260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr9:48900979-48900825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr9:61302864-61303035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr9:9403314-9403132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr9:20416653-20416467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr9:20847802-20848004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-148
               

               
Cow position:
               
chr9:11873438-11873303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr9:22466639-22466809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr9:5263364-5263541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
179, 51
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr9:7952759-7952943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr9:8636538-8636709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr9:13205710-13205530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr9:57131358-57131537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
6-190
               

               
Cow position:
               
chr9:12786614-12786430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr9:59699695-59699496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chr9:26279308-26279127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr9:17741076-17740900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr9:52267894-52267698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
16-176
               

               
Cow position:
               
chr9:9358337-9358181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
16-189
               

               
Cow position:
               
chr9:51204594-51204769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
26-165
               

               
Cow position:
               
chr9:49545483-49545346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr9:19555265-19555448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
40-185
               

               
Cow position:
               
chr9:4268089-4267943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr9:6293489-6293637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr9:8562715-8562862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
40-194
               

               
Cow position:
               
chr9:18342626-18342780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
40-217
               

               
Cow position:
               
chr9:16137447-16137271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
46-229
               

               
Cow position:
               
chr9:19758620-19758812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
59-169
               

               
Cow position:
               
chr9:8706280-8706390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-189
               

               
Cow position:
               
chr9:54615384-54615261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
64-190
               

               
Cow position:
               
chr9:39758435-39758561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-339
               

               
Cow position:
               
chr9:2398428-2398315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
236-339
               

               
Cow position:
               
chr9:26404005-26404106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
240-339
               

               
Cow position:
               
chr9:28739890-28739988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
244-337
               

               
Cow position:
               
chr9:5226944-5226850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
244-339
               

               
Cow position:
               
chr9:37528676-37528773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
244-339
               

               
Cow position:
               
chr9:41416571-41416667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
244-365
               

               
Cow position:
               
chr9:18140074-18139950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
250-339
               

               
Cow position:
               
chr9:5594728-5594817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-339
               

               
Cow position:
               
chr9:61739147-61739233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
253-339
               

               
Cow position:
               
chr9:5319860-5319946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-333
               

               
Cow position:
               
chr9:16811080-16811002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
80
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
254-335
               

               
Cow position:
               
chr9:31077446-31077365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
82
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-337
               

               
Cow position:
               
chr9:11146423-11146340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-337
               

               
Cow position:
               
chr9:33218720-33218637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:1855512-1855596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:5763398-5763313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:9516538-9516454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:15805689-15805604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:19539329-19539414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:20038929-20038844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:24726446-24726361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:29006792-29006877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:29841119-29841206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:35904519-35904434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:37510249-37510334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:43871204-43871289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:49982865-49982780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:52739667-52739583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:54178017-54177928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
254-339
               

               
Cow position:
               
chr9:54528747-54528832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-340
               

               
Cow position:
               
chr9:3532677-3532591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-340
               

               
Cow position:
               
chr9:61997363-61997278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
254-341
               

               
Cow position:
               
chr9:8525296-8525384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
254-341
               

               
Cow position:
               
chr9:46316556-46316469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-373
               

               
Cow position:
               
chr9:52505071-52504951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
254-373
               

               
Cow position:
               
chr9:57951097-57950978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
255-339
               

               
Cow position:
               
chr9:5509957-5510041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
255-339
               

               
Cow position:
               
chr9:36445855-36445938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
255-340
               

               
Cow position:
               
chr9:9199551-9199467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
256-339
               

               
Cow position:
               
chr9:13994422-13994505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
256-339
               

               
Cow position:
               
chr9:28773351-28773434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
256-339
               

               
Cow position:
               
chr9:42498063-42498146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-339
               

               
Cow position:
               
chr9:8418141-8418059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
83
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-339
               

               
Cow position:
               
chr9:48628468-48628548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
82
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
258-340
               

               
Cow position:
               
chr9:5268792-5268874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
83
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.