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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8012G21.3
        

               
Conread position:
               
1-121
               

               
Cow position:
               
chr20:38935457-38935338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr20:24363395-24363552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr20:34375977-34376145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr20:23850042-23850238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
179, 23
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr20:14878291-14878500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr20:15068898-15069118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 176
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr20:15761192-15760964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
187, 23
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr20:41703909-41704149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:21959300-21959056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr20:13269380-13269617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
184, 62
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr20:27314437-27314671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr20:7806807-7806552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
179, 214
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr20:30817286-30817553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr20:17251466-17251739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
187, 53
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr20:35241891-35242196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
175, 217
               

               
Conread position:
               
3-118
               

               
Cow position:
               
chr20:40304091-40303976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-124
               

               
Cow position:
               
chr20:20201749-20201868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-139
               

               
Cow position:
               
chr20:36039969-36040103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr20:20438037-20437897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr20:20700583-20700443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr20:36052155-36052295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chr20:15437722-15437865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr20:7756870-7756705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr20:34716622-34716451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr20:13267676-13267504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr20:7710450-7710282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr20:9279496-9279320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr20:10791065-10791241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr20:15597595-15597419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr20:42278465-42278638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr20:34089653-34089829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr20:19352004-19351834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr20:32667747-32667924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr20:6238890-6238712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr20:13790066-13790240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr20:31147853-31148018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr20:35145764-35145944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:2768353-2768172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:4746205-4746024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:4902202-4902383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:13303301-13303120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:17806832-17806651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:31252285-31252466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:32866589-32866409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:33810867-33811048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr20:36310505-36310324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr20:12434412-12434230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr20:27565778-27565962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr20:13048660-13048473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
177, 9
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr20:16957070-16956878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr20:32168087-32167894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr20:3502051-3502242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr20:32847109-32847302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr20:14756310-14756114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr20:4950663-4950461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr20:11887715-11887508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr20:8101290-8101082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr20:8870327-8870122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 194
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr20:15777398-15777191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr20:20196902-20197099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
173, 106
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr20:39137451-39137242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr20:12839815-12840021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr20:35113288-35113505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr20:10178353-10178128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr20:22235069-22235285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr20:23164115-23163904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr20:10235609-10235829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
185, 172
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr20:326517-326739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr20:7426433-7426214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr20:13752003-13752214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr20:40423333-40423114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
185, 131
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr20:40177009-40177222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
184, 51
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr20:38139662-38139886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr20:10859608-10859381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr20:9014591-9014365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:3781674-3781443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:4945488-4945263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
176, 115
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:5958147-5957918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:6501556-6501788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
177, 155
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:10539078-10539300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
182, 86
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:11453597-11453371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:11550123-11550349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:11614286-11614059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:13493495-13493718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
173, 118
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:15582278-15582054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:17657244-17657011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 191
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:35889009-35888783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:35958406-35958629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
183, 46
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:38123642-38123873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:39398237-39398469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr20:39728208-39728432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr20:24069572-24069788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
184, 41
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr20:10913577-10913343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr20:11176490-11176256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr20:22959588-22959350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:12567331-12567095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:17889331-17889089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 189
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:23803148-23803389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:25844310-25844069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:26748587-26748828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:28559943-28559701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:28726042-28726283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:35036270-35036029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 110
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:40058511-40058751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr20:581171-580928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr20:19845759-19846010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr20:37153969-37153724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr20:7132105-7132353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr20:31927701-31927458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
194, 173
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr20:3599635-3599391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr20:33144796-33144549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr20:7659452-7659214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
179, 42
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr20:8112571-8112823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
173, 168
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr20:21714509-21714760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr20:22920403-22920164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
203, 107
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr20:12441934-12441680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr20:19328157-19328408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
173, 57
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr20:5104677-5104434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr20:23792361-23792616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr20:27641893-27642148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr20:27877480-27877736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr20:34325810-34325557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr20:40715439-40715690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:754439-754693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:1024255-1024000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:1761791-1762046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:3745380-3745635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:5097476-5097221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:5502743-5502488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:7110361-7110113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:7398936-7398686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:7641918-7642173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:9994279-9994534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:11330413-11330157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:13114676-13114421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:13450655-13450399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
136, 160
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:13618796-13618542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:13821825-13821574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
177, 66
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:14011727-14011983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:15577134-15576878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:16407432-16407686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 52
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:17864122-17864377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:17909203-17908948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:18100176-18100420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:20492935-20492680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:20693068-20692813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:23355061-23354806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:24388680-24388935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:26597831-26598086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:28246424-28246166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:30828230-30827974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 191
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:30908957-30909212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:31325813-31325558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:31505330-31505585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:31784315-31784060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:33021673-33021928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:33514619-33514874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:33540635-33540889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:34276630-34276375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:35999445-35999699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
172, 77
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:36336705-36336451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:36390850-36390595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:36424479-36424734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:36614458-36614203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:37435584-37435839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:38350809-38350554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr20:39062485-39062740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr20:31746866-31746618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr20:6096728-6096483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr20:13766880-13767139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr20:19313308-19313054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr20:20202973-20203226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
185, 131
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr20:23065080-23064820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 139
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr20:31261490-31261734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr20:12334139-12334391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
188, 118
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr20:3378308-3378568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr20:35094520-35094782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 131
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr20:36704597-36704862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr20:19146627-19146894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:2433176-2433443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:5998911-5998651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:6135007-6134740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 159
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:6240772-6240502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
123, 177
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:9412253-9412503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
182, 60
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:11350691-11350958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:14804018-14804281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 226
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:20485521-20485254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr20:24521508-24521769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
187, 131
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr20:10497443-10497178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr20:28100460-28100729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr20:28324476-28324741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr20:29979787-29980055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr20:36779973-36779705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr20:3405836-3406104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr20:8578003-8578270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
181, 51
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr20:9473857-9473591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
175, 123
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr20:31845824-31845537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr20:35797363-35797633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
185, 56
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr20:13876951-13876678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
178, 159
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr20:24398875-24398607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
177, 128
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr20:18413614-18413881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
179, 51
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr20:3607194-3606933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
245, 47
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr20:5089117-5089392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
170, 189
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr20:14806641-14806914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr20:18399518-18399789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr20:34001639-34001366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
151, 131
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr20:34202404-34202678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
183, 145
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:8708006-8707730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:14436553-14436827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 52
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:18321041-18320760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
9, 191
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:21952981-21953257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:22274111-22273835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
136, 126
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:22897084-22897354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 131
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:24543599-24543875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:26737452-26737176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:29308037-29307761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:30480107-30480383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:34458276-34458002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
173, 250
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr20:35640792-35641068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr20:26349327-26349604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
173, 261
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr20:19410608-19410330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr20:22064830-22065110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr20:12582190-12581915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
232, 115
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr20:33363273-33363559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr20:398536-398264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
187, 22
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr20:41371722-41372014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr20:20353157-20352867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
226, 67
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:4727219-4727522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:8083024-8083328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 167
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:15009488-15009790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:16189087-16188784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:16628459-16628762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:18440434-18440136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 60
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:20764911-20765214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 203
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:20785581-20785884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:26052356-26052053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:32452122-32452425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:33994257-33993954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:35073379-35073682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:39269742-39269439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr20:40008932-40009235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
4-143
               

               
Cow position:
               
chr20:8096648-8096785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr20:12064388-12064561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr20:31886230-31886050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:12155342-12155142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr20:41977180-41977399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
184, 50
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr20:27339821-27340080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr20:6258305-6258035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
181, 59
               

               
Conread position:
               
5-117
               

               
Cow position:
               
chr20:29990718-29990607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
5-160
               

               
Cow position:
               
chr20:26058309-26058156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr20:14718981-14718810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr20:29284609-29284430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr20:6571091-6571311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr20:21019324-21019548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
183, 106
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr20:39517772-39517990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr20:4621582-4621340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 131
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr20:40127577-40127331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
145, 162
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr20:774471-774218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr20:22445877-22445628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr20:23871056-23870810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr20:12996250-12995999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 130
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr20:22313401-22313140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr20:19363603-19363331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
183, 103
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr20:10884607-10884310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
118, 246
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr20:4578845-4578544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
171, 259
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr20:17831606-17831827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr20:9411341-9411565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
170, 128
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr20:17734013-17733779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
177, 54
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr20:24104712-24104459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr20:14740334-14740112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr20:15549135-15548917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr20:18185342-18185550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr20:32636802-32636585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
158, 114
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr20:35970704-35970929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 168
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr20:10372535-10372301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
167, 183
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr20:14650678-14650442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr20:15431928-15432164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 185
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr20:19751074-19751303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
179, 23
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr20:39418129-39417900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
175, 15
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr20:9489629-9489380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr20:6054749-6054493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr20:10200104-10200366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr20:10208568-10208834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
176, 6
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr20:13967495-13967215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
177, 116
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr20:39743077-39743352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 169
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr20:20312973-20312763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
174, 104
               

               
Conread position:
               
11-210
               

               
Cow position:
               
chr20:5702510-5702709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
177, 163
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr20:10338060-10337844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 85
               

               
Conread position:
               
12-135
               

               
Cow position:
               
chr20:5950866-5950744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
12-160
               

               
Cow position:
               
chr20:15822084-15822226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
12-174
               

               
Cow position:
               
chr20:21345172-21345338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr20:4756059-4755893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr20:9707131-9706967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
12-184
               

               
Cow position:
               
chr20:3658931-3658766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr20:36997480-36997666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
12-208
               

               
Cow position:
               
chr20:1640681-1640485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
168, 177
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr20:5539152-5539374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr20:23679380-23679164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
176, 122
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr20:31464615-31464393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
164, 180
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr20:33170108-33169889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
166, 41
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr20:33532073-33532301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr20:8429511-8429755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
164, 48
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr20:17903922-17904167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr20:16715166-16715412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
221, 122
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr20:38817779-38818024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr20:3034860-3035127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr20:10468837-10469087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
163, 77
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr20:26076851-26077105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
220, 41
               

               
Conread position:
               
12-276
               

               
Cow position:
               
chr20:42469530-42469785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr20:18651615-18651882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
164, 248
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr20:25009877-25009594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
144, 166
               

               
Conread position:
               
13-257
               

               
Cow position:
               
chr20:33435398-33435156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
13-264
               

               
Cow position:
               
chr20:3331527-3331271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
163, 233
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr20:13955809-13956013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
186, 62
               

               
Conread position:
               
14-266
               

               
Cow position:
               
chr20:11341037-11340780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
166, 245
               

               
Conread position:
               
15-197
               

               
Cow position:
               
chr20:34836098-34835921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr20:31740446-31740239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr20:24391756-24392000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
218, 34
               

               
Conread position:
               
16-179
               

               
Cow position:
               
chr20:27843420-27843584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr20:22683686-22683472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
18-180
               

               
Cow position:
               
chr20:32583900-32584061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
18-270
               

               
Cow position:
               
chr20:9536906-9537160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
163, 116
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr20:28982471-28982746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
216, 34
               

               
Conread position:
               
20-203
               

               
Cow position:
               
chr20:12783971-12784149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
20-254
               

               
Cow position:
               
chr20:19238656-19238421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
180, 17
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr20:18507022-18507306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
156, 196
               

               
Conread position:
               
21-178
               

               
Cow position:
               
chr20:14620497-14620344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
21-217
               

               
Cow position:
               
chr20:4781335-4781533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
21-226
               

               
Cow position:
               
chr20:39019471-39019670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
167, 38
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr20:4205738-4205951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 156
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr20:8556495-8556287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr20:29844828-29845033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
21-235
               

               
Cow position:
               
chr20:35364827-35365029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
163, 29
               

               
Conread position:
               
21-235
               

               
Cow position:
               
chr20:41028266-41028473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
177, 40
               

               
Conread position:
               
21-240
               

               
Cow position:
               
chr20:8910699-8910911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
163, 105
               

               
Conread position:
               
21-242
               

               
Cow position:
               
chr20:29805882-29805666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
21-254
               

               
Cow position:
               
chr20:17669957-17670191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 209
               

               
Conread position:
               
21-254
               

               
Cow position:
               
chr20:20557879-20557643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 168
               

               
Conread position:
               
21-275
               

               
Cow position:
               
chr20:17845735-17845984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 39
               

               
Conread position:
               
22-179
               

               
Cow position:
               
chr20:14403201-14403045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
22-183
               

               
Cow position:
               
chr20:18618415-18618569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
22-210
               

               
Cow position:
               
chr20:18551139-18551329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
158, 71
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr20:12420845-12420636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr20:13829043-13829248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
167, 27
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr20:14572582-14572376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr20:14759888-14759677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr20:23505605-23505810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
166, 32
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr20:35897294-35897502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
160, 104
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr20:7442348-7442132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr20:21928674-21928901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr20:22007280-22007496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 104
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr20:14735453-14735680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
166, 32
               

               
Conread position:
               
22-271
               

               
Cow position:
               
chr20:39405544-39405785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
22-272
               

               
Cow position:
               
chr20:14831837-14831590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
23-253
               

               
Cow position:
               
chr20:15078861-15078627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
153, 169
               

               
Conread position:
               
23-270
               

               
Cow position:
               
chr20:37200137-37200383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
23-320
               

               
Cow position:
               
chr20:26996311-26996606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
24-186
               

               
Cow position:
               
chr20:4893119-4892966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr20:1139995-1139819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
164, 110
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr20:34597330-34597090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
24-264
               

               
Cow position:
               
chr20:11923461-11923225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
24-265
               

               
Cow position:
               
chr20:22704066-22704312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
164, 152
               

               
Conread position:
               
25-180
               

               
Cow position:
               
chr20:21372094-21372250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr20:5826716-5826924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
163, 151
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr20:11741524-11741317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
25-242
               

               
Cow position:
               
chr20:11482360-11482139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr20:23936635-23936402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr20:40511977-40511775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
26-257
               

               
Cow position:
               
chr20:38578976-38578753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr20:5025520-5025322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr20:34776968-34777163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 101
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr20:40256752-40256954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
28-252
               

               
Cow position:
               
chr20:39675611-39675388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
28-314
               

               
Cow position:
               
chr20:38768671-38768390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
160, 101
               

               
Conread position:
               
29-181
               

               
Cow position:
               
chr20:16788218-16788369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
29-251
               

               
Cow position:
               
chr20:6890488-6890719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 192
               

               
Conread position:
               
29-254
               

               
Cow position:
               
chr20:19265940-19266162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
196, 132
               

               
Conread position:
               
29-254
               

               
Cow position:
               
chr20:26679907-26680133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
30-205
               

               
Cow position:
               
chr20:13023694-13023519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
146, 101
               

               
Conread position:
               
30-230
               

               
Cow position:
               
chr20:41452022-41451825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
146, 96
               

               
Conread position:
               
30-234
               

               
Cow position:
               
chr20:16291255-16291455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
30-251
               

               
Cow position:
               
chr20:15235548-15235773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
31-210
               

               
Cow position:
               
chr20:24902687-24902502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
32-242
               

               
Cow position:
               
chr20:9379195-9379405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
156, 102
               

               
Conread position:
               
32-251
               

               
Cow position:
               
chr20:28296076-28296297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 86
               

               
Conread position:
               
33-194
               

               
Cow position:
               
chr20:22029725-22029887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 157
               

               
Conread position:
               
33-233
               

               
Cow position:
               
chr20:7182889-7182691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 108
               

               
Conread position:
               
33-266
               

               
Cow position:
               
chr20:8020682-8020918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
34-304
               

               
Cow position:
               
chr20:6848410-6848683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
35-233
               

               
Cow position:
               
chr20:35907257-35907068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
35-250
               

               
Cow position:
               
chr20:32069069-32068849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
36-231
               

               
Cow position:
               
chr20:35760461-35760651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
146, 105
               

               
Conread position:
               
36-277
               

               
Cow position:
               
chr20:34251888-34251650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
37-233
               

               
Cow position:
               
chr20:15593087-15593278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
37-274
               

               
Cow position:
               
chr20:33176973-33177216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
146, 115
               

               
Conread position:
               
38-225
               

               
Cow position:
               
chr20:36331636-36331449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
147, 153
               

               
Conread position:
               
39-254
               

               
Cow position:
               
chr20:38551167-38551381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
149, 69
               

               
Conread position:
               
41-254
               

               
Cow position:
               
chr20:38486753-38486541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
188, 117
               

               
Conread position:
               
41-254
               

               
Cow position:
               
chr20:39325180-39325397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 157
               

               
Conread position:
               
42-210
               

               
Cow position:
               
chr20:5116508-5116341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr20:15566034-15565842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
48-269
               

               
Cow position:
               
chr20:28067623-28067404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
183, 6
               

               
Conread position:
               
50-232
               

               
Cow position:
               
chr20:23846868-23846687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 103
               

               
Conread position:
               
51-225
               

               
Cow position:
               
chr20:8607115-8606942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
51-264
               

               
Cow position:
               
chr20:34098153-34097939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 83
               

               
Conread position:
               
54-257
               

               
Cow position:
               
chr20:6602849-6603050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr20:13994618-13994797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
56-230
               

               
Cow position:
               
chr20:32084274-32084101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr20:16935476-16935323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-240
               

               
Cow position:
               
chr20:14980688-14980523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
80-257
               

               
Cow position:
               
chr20:28831797-28831979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
82-293
               

               
Cow position:
               
chr20:3321302-3321091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
89-271
               

               
Cow position:
               
chr20:32988989-32988814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
91-262
               

               
Cow position:
               
chr20:5636325-5636498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 98
               
Show alignments to all cow chromosomes.