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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8012G21.3
        

               
Conread position:
               
1-123
               

               
Cow position:
               
chr21:48637970-48637848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr21:36762829-36762950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr21:7814935-7814710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:34010614-34010394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:363431-363654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 89
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:5636945-5636714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
187, 125
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:13954287-13954522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 193
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:32535752-32535979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
182, 133
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr21:10727057-10727293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr21:36297255-36297503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:1781128-1781384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr21:12153909-12154164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr21:41878252-41878513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
188, 94
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr21:23192742-23192466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
190, 175
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr21:2904686-2904382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr21:34658811-34659059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
180, 132
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr21:44108786-44109045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
3-124
               

               
Cow position:
               
chr21:9862843-9862726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
3-127
               

               
Cow position:
               
chr21:10032135-10032259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-127
               

               
Cow position:
               
chr21:45971380-45971256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr21:7672911-7673039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr21:20588809-20588951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chr21:23293377-23293236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr21:19562970-19563117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
123, 145
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr21:30257926-30257778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr21:25158671-25158817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr21:684257-684415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr21:40265611-40265769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr21:35899585-35899757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr21:4279410-4279585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr21:28029175-28029350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr21:47760555-47760729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr21:11877162-11877334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr21:29942779-29942957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr21:426570-426745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr21:17282481-17282655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr21:28919845-28919670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr21:28998129-28997950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr21:18713064-18713236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr21:2709782-2709601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr21:16575339-16575158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr21:21624192-21624373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr21:21910133-21910314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr21:22100092-22099911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr21:25598772-25598952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 52
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr21:21600882-21600701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr21:33770785-33770966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr21:24130859-24131036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr21:34011325-34011135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr21:8289863-8289675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr21:16166855-16166669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
179, 114
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr21:31576292-31576474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr21:20162313-20162507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
177, 85
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr21:26399677-26399479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr21:30626405-30626205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr21:3782878-3783080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr21:27376227-27376428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr21:44281053-44280849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr21:34254504-34254300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
176, 136
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr21:17643185-17642984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr21:31436124-31436332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr21:16909833-16910044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr21:21170164-21169960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr21:28599545-28599758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr21:31159032-31159244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr21:35897842-35897651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
177, 6
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr21:26648226-26648014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr21:4795000-4795220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr21:41040643-41040866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr21:3818886-3819105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr21:5641730-5641508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr21:7132684-7132466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 56
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr21:5649684-5649904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
177, 75
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr21:13763403-13763617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
185, 47
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr21:4732439-4732217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr21:5566769-5566998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr21:10151573-10151793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
175, 51
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr21:47649445-47649670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr21:42348900-42348673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr21:48251252-48251026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr21:13395333-13395555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr21:17709606-17709831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
183, 25
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:3987708-3987476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:4080132-4080363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 67
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:4189612-4189840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
172, 136
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:5344439-5344662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
173, 52
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:7582127-7581902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 36
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:8351523-8351303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:10071151-10070929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 96
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:10967011-10967238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:11639798-11640026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:17416984-17416757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
183, 130
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:17475595-17475825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 137
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:18934701-18934923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
185, 65
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:19614951-19615178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 74
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:21216363-21216139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:22855997-22856224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:23150241-23150018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:23478939-23478713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:23672524-23672754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:23683328-23683552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:24858089-24858317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 173
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:27230014-27229790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:28993848-28993617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
179, 190
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:30594974-30594738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:32297724-32297504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
177, 57
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:33209977-33210206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
185, 9
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:34738376-34738614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
119, 132
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:36857408-36857631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:38900551-38900782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 187
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:41974601-41974371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
183, 189
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:43240636-43240871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:44114349-44114132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr21:49700258-49700030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
177, 131
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr21:17511554-17511783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
187, 101
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr21:32191948-32192180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 129
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr21:20925728-20925501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
187, 56
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr21:40899114-40899346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
189, 225
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr21:395656-395884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:150254-150492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 126
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:1196645-1196887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:4267572-4267330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:18718447-18718688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:23900029-23899787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:24136696-24136937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:25193573-25193812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 86
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:27607585-27607343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:81848-82095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 178
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:1464011-1464247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
178, 33
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:12366165-12366398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
230, 136
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:13410045-13409808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
130, 137
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:21480401-21480167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:23984506-23984265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:28442517-28442758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:33419937-33419707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
175, 98
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:33933606-33933363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr21:40058584-40058821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr21:9743801-9743555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr21:16696148-16696389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
173, 76
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr21:42170408-42170656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
138, 190
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr21:13111019-13110774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr21:37517587-37517342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr21:24607163-24607406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 225
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr21:9278146-9278405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr21:10854364-10854618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 191
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr21:34877500-34877249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr21:4998707-4998461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
158, 60
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr21:2877734-2877481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr21:24296985-24296738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr21:44826098-44825863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
185, 39
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr21:46912322-46912566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 68
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr21:35919366-35919620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:661829-661574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:1457843-1457588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:2359670-2359919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:2938807-2939062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:3364567-3364822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:4092762-4093015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:5791003-5791258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:7038085-7037830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:11143742-11143489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
223, 171
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:11510044-11510299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:13168928-13169183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:13632667-13632922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:13930915-13931170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:17539512-17539767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:17948147-17947892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:18574622-18574877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:23322303-23322050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
172, 51
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:23329234-23328979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:24222763-24222510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:24236891-24237145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
189, 52
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:25076610-25076355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:26071374-26071119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:26835517-26835262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:27036556-27036811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:27863741-27863488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
186, 51
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:28259775-28260028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 146
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:29954998-29955253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:30655747-30656002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:31039574-31039319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:32356576-32356322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:32395904-32395648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 159
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:33709392-33709137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:34074745-34075000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:34909969-34910224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:36225525-36225778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:37299243-37299488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:38848692-38848437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:39486167-39485912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
142, 160
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:40108211-40107956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr21:41795616-41795361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr21:451982-452240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:912190-911936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:6833830-6834083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:23801343-23801097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
179, 50
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:30566797-30567048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:34391192-34390944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:39401378-39401625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
179, 57
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:39700298-39700039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr21:46849345-46849096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
194, 131
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr21:11292816-11293082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr21:20262556-20262295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
185, 120
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr21:41155640-41155899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr21:23821946-23822206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
182, 75
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr21:36163185-36162923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
177, 136
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr21:4905189-4904927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr21:39403760-39403496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
179, 51
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:611989-611728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
182, 29
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:1179158-1178892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:13128316-13128058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:13897971-13898225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
183, 21
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:17412514-17412259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
185, 116
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:30153063-30152796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:30650749-30650482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:39822032-39821765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:39888966-39888708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
185, 123
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:40244212-40244480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
121, 258
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:41235933-41235666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 201
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr21:45372133-45372400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr21:14760362-14760615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr21:28477403-28477668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 46
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr21:9416020-9416292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr21:23606452-23606716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
160, 123
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr21:33997447-33997185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr21:42913968-42913701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
230, 125
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr21:45866714-45866976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
178, 75
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr21:47802484-47802217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr21:13035271-13034996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 201
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr21:28734134-28733869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
230, 130
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr21:44252050-44251800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 140
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr21:393799-394065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
232, 173
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr21:4569720-4569446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr21:7564544-7564269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 75
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr21:15445301-15445026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
175, 145
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr21:31702178-31701905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
187, 103
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr21:3236310-3236570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
230, 50
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr21:4399578-4399853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
185, 18
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr21:38120881-38121149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:48253-48529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 256
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:2472669-2472392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:4665706-4665432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 108
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:4897875-4897599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:4957412-4957136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:7047079-7046801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 120
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:19614351-19614629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 217
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:19626602-19626323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:20370473-20370749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:26875699-26875978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:27336600-27336876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:30570972-30570696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:30965834-30965559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 76
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:35068140-35068416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr21:38651143-38650872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 90
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr21:5021246-5021528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr21:28626019-28626301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
185, 67
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr21:29069550-29069267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
187, 23
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr21:43357483-43357193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr21:643115-643386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
230, 42
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr21:11740354-11740057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 186
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr21:16188018-16187745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
185, 30
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr21:29500684-29500976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr21:641362-641662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
173, 98
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr21:33729211-33729498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr21:40786448-40786746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
130, 136
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:2491012-2490709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:7597156-7596853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:10075158-10074853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:16795118-16795421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:25480367-25480675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:26480681-26480983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:26854585-26854282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:30059666-30059363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:30134894-30135197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:33632671-33632368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:36973036-36972733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
170, 257
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr21:39561375-39561678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr21:33983032-33982711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 186
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr21:42540442-42540126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
138, 80
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr21:27147446-27147109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
156, 263
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr21:13300931-13301104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:17936147-17936379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:19196389-19196158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
57, 189
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:19766633-19766860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
172, 122
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:36642686-36642911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 130
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:41957395-41957172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
184, 112
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr21:17144927-17145168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr21:11706971-11706717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
176, 5
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr21:5898619-5898364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr21:10882205-10882485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 195
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr21:16612408-16612672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
181, 122
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr21:30990489-30990231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
184, 50
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr21:8985328-8985596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
184, 130
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr21:13048417-13048125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr21:20109052-20108858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr21:703386-703185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr21:13316162-13316360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 151
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr21:11759684-11759484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 104
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr21:16789501-16789709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr21:18289443-18289644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr21:25764415-25764631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr21:3585576-3585366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
183, 38
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr21:2679331-2679557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
7, 172
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr21:13718079-13717854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
181, 171
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr21:25344658-25344882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr21:44671533-44671766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
183, 171
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr21:20160464-20160694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr21:27124348-27124110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr21:42190387-42190159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr21:33235578-33235831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr21:31691261-31691513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr21:5857356-5857093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr21:34181775-34182035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
171, 78
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr21:22719000-22718741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
183, 11
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr21:15976420-15976682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr21:725110-724788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr21:17433474-17433271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
182, 123
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr21:18935542-18935752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
182, 58
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr21:30250427-30250195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr21:38691971-38692184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr21:17410878-17410653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr21:48459087-48458838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr21:46263958-46264214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
181, 63
               

               
Conread position:
               
9-181
               

               
Cow position:
               
chr21:3614143-3614307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
9-193
               

               
Cow position:
               
chr21:5153401-5153581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr21:37282093-37282274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
173, 125
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr21:8974004-8974202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr21:30592514-30592323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 30
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr21:6764918-6764692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr21:19083820-19083591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr21:31662244-31662470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
179, 165
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr21:28429233-28429448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr21:36795384-36795616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr21:26628881-26629130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr21:48484656-48484416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr21:33107796-33108066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
167, 254
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr21:31676286-31676567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
167, 19
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr21:46777187-46777006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 90
               

               
Conread position:
               
11-227
               

               
Cow position:
               
chr21:43272068-43271851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr21:2495388-2495154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
165, 181
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr21:20044984-20044699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
12-124
               

               
Cow position:
               
chr21:27341810-27341698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-174
               

               
Cow position:
               
chr21:18568864-18568704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 130
               

               
Conread position:
               
12-178
               

               
Cow position:
               
chr21:17218829-17218666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr21:26241611-26241775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
12-180
               

               
Cow position:
               
chr21:31278566-31278729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr21:38918002-38918166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr21:937836-938015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr21:33350529-33350727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
176, 164
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr21:18781627-18781843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 181
               

               
Conread position:
               
12-225
               

               
Cow position:
               
chr21:13303606-13303815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
168, 110
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr21:42464057-42463832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 212
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr21:5595448-5595661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
185, 65
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr21:15867099-15867313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
164, 77
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr21:18783894-18783681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr21:28512321-28512533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr21:48262920-48263128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
170, 12
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr21:15584616-15584395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
221, 42
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr21:23535500-23535741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr21:25127395-25127630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
168, 53
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr21:42874842-42874600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 200
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr21:27743525-27743787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr21:42384292-42384550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr21:30231916-30231652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
44, 222
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr21:42414315-42414056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr21:12616926-12617192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
176, 119
               

               
Conread position:
               
12-296
               

               
Cow position:
               
chr21:24796251-24795969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 146
               

               
Conread position:
               
12-299
               

               
Cow position:
               
chr21:42905591-42905303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr21:13953660-13953954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 251
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr21:37479743-37480051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
173, 119
               

               
Conread position:
               
13-230
               

               
Cow position:
               
chr21:7717003-7716783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
13-233
               

               
Cow position:
               
chr21:4282078-4281867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
173, 19
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr21:1483277-1483506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
13-253
               

               
Cow position:
               
chr21:26744154-26743908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
14-119
               

               
Cow position:
               
chr21:29015103-29014998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-250
               

               
Cow position:
               
chr21:45473969-45473730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr21:33562809-33563026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
16-234
               

               
Cow position:
               
chr21:43236754-43236972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
160, 176
               

               
Conread position:
               
16-257
               

               
Cow position:
               
chr21:43300866-43300623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
160, 64
               

               
Conread position:
               
19-270
               

               
Cow position:
               
chr21:17434527-17434274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
167, 143
               

               
Conread position:
               
20-210
               

               
Cow position:
               
chr21:21223085-21223274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
162, 34
               

               
Conread position:
               
20-224
               

               
Cow position:
               
chr21:19258621-19258825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
163, 111
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr21:3498293-3498506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 109
               

               
Conread position:
               
21-226
               

               
Cow position:
               
chr21:27569362-27569168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr21:6051302-6051511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
167, 127
               

               
Conread position:
               
21-252
               

               
Cow position:
               
chr21:24094948-24094722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
159, 83
               

               
Conread position:
               
21-254
               

               
Cow position:
               
chr21:40133951-40134189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
53, 154
               

               
Conread position:
               
21-258
               

               
Cow position:
               
chr21:41620915-41621156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 169
               

               
Conread position:
               
21-263
               

               
Cow position:
               
chr21:22860798-22861039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr21:8618070-8618324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
153, 118
               

               
Conread position:
               
21-274
               

               
Cow position:
               
chr21:2927407-2927154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr21:9710908-9710644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr21:12961103-12960836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
164, 33
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr21:17674440-17674163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
132, 68
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr21:29484780-29485044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
167, 33
               

               
Conread position:
               
22-180
               

               
Cow position:
               
chr21:24758866-24759023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
22-181
               

               
Cow position:
               
chr21:14464374-14464531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
22-199
               

               
Cow position:
               
chr21:46132181-46132007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
154, 112
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr21:18828512-18828309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr21:45355633-45355839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
159, 111
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr21:34835626-34835430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
166, 48
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr21:4276797-4276580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 156
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr21:25382804-25383030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr21:41579548-41579777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr21:45330811-45330576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr21:24765081-24765320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
22-264
               

               
Cow position:
               
chr21:30607288-30607051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
211, 17
               

               
Conread position:
               
22-265
               

               
Cow position:
               
chr21:34739646-34739882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
211, 32
               

               
Conread position:
               
22-270
               

               
Cow position:
               
chr21:5137695-5137444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
22-271
               

               
Cow position:
               
chr21:24598456-24598700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
22-280
               

               
Cow position:
               
chr21:29002365-29002106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
163, 169
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr21:12801947-12801697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 32
               

               
Conread position:
               
23-251
               

               
Cow position:
               
chr21:41597613-41597846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
23-254
               

               
Cow position:
               
chr21:13850274-13850037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
23-268
               

               
Cow position:
               
chr21:5596943-5597193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr21:9310842-9311049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr21:32237096-32237299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
164, 110
               

               
Conread position:
               
24-239
               

               
Cow position:
               
chr21:3381282-3381070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
143, 37
               

               
Conread position:
               
24-242
               

               
Cow position:
               
chr21:28443580-28443360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 168
               

               
Conread position:
               
24-254
               

               
Cow position:
               
chr21:27521526-27521304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
149, 30
               

               
Conread position:
               
25-275
               

               
Cow position:
               
chr21:42145716-42145963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr21:23586677-23586924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 163
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr21:28881943-28882179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
152, 100
               

               
Conread position:
               
27-203
               

               
Cow position:
               
chr21:35897289-35897456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
27-266
               

               
Cow position:
               
chr21:3361212-3360974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
205, 27
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr21:46242436-46242233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
160, 26
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr21:11645166-11644919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
204, 103
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr21:21077133-21077330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
29-265
               

               
Cow position:
               
chr21:39450364-39450124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr21:42135820-42135564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
159, 147
               

               
Conread position:
               
30-178
               

               
Cow position:
               
chr21:42465634-42465782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-242
               

               
Cow position:
               
chr21:9998916-9998701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
30-275
               

               
Cow position:
               
chr21:23568013-23568268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
31-251
               

               
Cow position:
               
chr21:31253341-31253569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
31-261
               

               
Cow position:
               
chr21:31277627-31277856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
31-266
               

               
Cow position:
               
chr21:1591357-1591594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
32-219
               

               
Cow position:
               
chr21:9334452-9334270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
152, 91
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr21:13163700-13163887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
156, 41
               

               
Conread position:
               
32-242
               

               
Cow position:
               
chr21:10118360-10118575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
32-252
               

               
Cow position:
               
chr21:3763930-3763713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
32-253
               

               
Cow position:
               
chr21:29979950-29979730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
32-293
               

               
Cow position:
               
chr21:38449645-38449383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
33-233
               

               
Cow position:
               
chr21:17193952-17193749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
33-233
               

               
Cow position:
               
chr21:45151815-45151615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
33-251
               

               
Cow position:
               
chr21:45850902-45850687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
192, 21
               

               
Conread position:
               
33-264
               

               
Cow position:
               
chr21:19363658-19363421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
33-266
               

               
Cow position:
               
chr21:47860996-47861237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
33-271
               

               
Cow position:
               
chr21:18942021-18941791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
155, 56
               

               
Conread position:
               
34-251
               

               
Cow position:
               
chr21:5426755-5426966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
35-258
               

               
Cow position:
               
chr21:18494776-18495001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
155, 19
               

               
Conread position:
               
35-264
               

               
Cow position:
               
chr21:33791558-33791328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 86
               

               
Conread position:
               
36-243
               

               
Cow position:
               
chr21:47764301-47764098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
36-257
               

               
Cow position:
               
chr21:3813672-3813453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
145, 93
               

               
Conread position:
               
37-257
               

               
Cow position:
               
chr21:40589671-40589454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
196, 139
               

               
Conread position:
               
38-230
               

               
Cow position:
               
chr21:4268686-4268877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
38-233
               

               
Cow position:
               
chr21:42023938-42024126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
152, 6
               

               
Conread position:
               
38-235
               

               
Cow position:
               
chr21:28027616-28027813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
40-257
               

               
Cow position:
               
chr21:18842423-18842207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
193, 136
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr21:17174956-17175155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
43-242
               

               
Cow position:
               
chr21:15911218-15911416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 82
               

               
Conread position:
               
43-319
               

               
Cow position:
               
chr21:13488337-13488623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
145, 106
               

               
Conread position:
               
44-201
               

               
Cow position:
               
chr21:802475-802323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
45-242
               

               
Cow position:
               
chr21:17183741-17183939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
45-263
               

               
Cow position:
               
chr21:45375436-45375660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
48-251
               

               
Cow position:
               
chr21:18790733-18790534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr21:32339911-32339694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 67
               

               
Conread position:
               
54-230
               

               
Cow position:
               
chr21:27146163-27145988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
56-266
               

               
Cow position:
               
chr21:21169664-21169451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
60-265
               

               
Cow position:
               
chr21:28617425-28617628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
73-275
               

               
Cow position:
               
chr21:10633793-10633593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
80-257
               

               
Cow position:
               
chr21:957521-957703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
80-270
               

               
Cow position:
               
chr21:28244330-28244513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
84-271
               

               
Cow position:
               
chr21:29978903-29978717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
87-254
               

               
Cow position:
               
chr21:12462109-12461942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
87-264
               

               
Cow position:
               
chr21:11359899-11360074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
89-319
               

               
Cow position:
               
chr21:12723020-12723251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 100
               
Show alignments to all cow chromosomes.