• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8012G21.3
        

               
Conread position:
               
1-151
               

               
Cow position:
               
chr6:54841145-54840997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr6:9375622-9375442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr6:57474132-57474308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr6:35769730-35769535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
178, 133
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr6:24074814-24074605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr6:6343178-6343385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
189, 133
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr6:15275339-15275106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr6:62479413-62479183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
185, 53
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr6:64449144-64449372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr6:41193252-41193493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
158, 92
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr6:3952277-3952519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
233, 74
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr6:60473886-60474131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 139
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr6:33302162-33302414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr6:11402221-11402478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr6:12947602-12947345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr6:3978909-3978651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr6:20231073-20230809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
180, 69
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr6:18961770-18961492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr6:68340047-68339770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr6:32867454-32867167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
228, 133
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr6:2423502-2423760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
186, 87
               

               
Conread position:
               
3-109
               

               
Cow position:
               
chr6:62015399-62015505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr6:24652426-24652299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
3-135
               

               
Cow position:
               
chr6:56502061-56502195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
3-142
               

               
Cow position:
               
chr6:58940468-58940329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr6:14891078-14890938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr6:31081803-31081943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chr6:10682502-10682644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-148
               

               
Cow position:
               
chr6:6060803-6060658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr6:60274469-60274324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr6:20951713-20951864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr6:24374474-24374326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr6:33579668-33579505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr6:60516482-60516649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr6:7801611-7801446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr6:38776355-38776524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr6:37487549-37487377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr6:59597411-59597583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr6:21164207-21164383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr6:39797825-39797649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr6:65041078-65040903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 152
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr6:45617686-45617510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr6:59277186-59277010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr6:37390768-37390947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr6:47150533-47150706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr6:51387520-51387693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr6:1174747-1174571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr6:5329909-5330076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr6:11829920-11830100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr6:12116298-12116122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr6:13741451-13741623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:4948696-4948877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:11097710-11097891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:12998320-12998501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:13605475-13605294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:14690706-14690886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:17364606-17364426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:19103003-19102822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:19737431-19737612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:19843177-19843358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:23849937-23849756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:25376162-25376344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:41033817-41033997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:41835204-41835385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:44705587-44705406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:45211048-45211229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:46371692-46371511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:53448802-53448983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:54886711-54886530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:55289647-55289828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:60066227-60066408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr6:65863228-65863410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr6:22877400-22877230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr6:25207340-25207521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr6:60467782-60467956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr6:60152790-60152974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
179, 130
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr6:20056385-20056572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr6:49627108-49627297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr6:12934386-12934197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr6:21719026-21718828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr6:18911830-18911631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr6:19570031-19569832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr6:39998577-39998376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr6:57149201-57149001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr6:52562414-52562216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr6:11772157-11771951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 13
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr6:14827080-14827283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr6:27173745-27173954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr6:39088526-39088729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr6:40320436-40320643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr6:43955456-43955663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr6:48421905-48421701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr6:54132573-54132774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 11
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr6:12845071-12845270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr6:21004410-21004638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr6:20329775-20329991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
177, 188
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr6:16397428-16397217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
171, 115
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr6:8562470-8562687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 172
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:595982-595760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:9742069-9742291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:12623225-12623441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
185, 68
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:18803155-18802934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 96
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:18987971-18988184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:21534813-21535027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
185, 123
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:24031129-24031351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
185, 172
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:25217585-25217367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr6:60456585-60456803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr6:46666860-46667084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr6:2546997-2547219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr6:23695752-23695968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr6:26413136-26413354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr6:58747964-58748189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr6:10605438-10605665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
12, 190
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr6:29210256-29210474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr6:32210874-32210651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr6:54980856-54981086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 190
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr6:55040463-55040234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 190
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr6:69500084-69500301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
185, 92
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr6:1278757-1278530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr6:19681762-19681544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
175, 21
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr6:40264443-40264222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
183, 126
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:642823-642584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:2012773-2012999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
185, 130
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:2110363-2110132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:2833121-2832894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 131
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:7312342-7312576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 192
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:8637029-8637255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
173, 122
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:13603221-13603447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 115
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:19427204-19427434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
177, 15
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:28811241-28811015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:32916166-32915944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:34196394-34196170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
185, 120
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:40549797-40549566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:40713745-40713520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
185, 46
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:42961613-42961381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
175, 219
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:46570874-46571097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:47383755-47383987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 190
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:47519805-47520030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
181, 50
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:51246705-51246933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 146
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:54647769-54647541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:54806977-54807209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:55594146-55594373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:55688795-55689021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
175, 15
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:55903987-55904218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:60877199-60877430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:61515443-61515211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
158, 51
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:61575358-61575589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:62925239-62925017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:65870778-65871010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
179, 190
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:66363490-66363263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
151, 136
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr6:67214496-67214725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr6:5672983-5673222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr6:2607368-2607596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr6:46205772-46205997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr6:52248383-52248149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:323556-323311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 196
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:8206091-8206332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:11721024-11720782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:12389853-12390090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
232, 46
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:12500611-12500849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:15137266-15137028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 131
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:20451861-20452097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:27526102-27525860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:34842805-34842564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:36532178-36532420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:40814266-40814509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
119, 190
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:46161770-46161532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
180, 190
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:50423646-50423413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:51718459-51718701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:54867266-54867505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:66566210-66566451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr6:67430135-67429893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr6:12387566-12387333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr6:12927874-12928111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr6:14696618-14696379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
183, 155
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr6:18447754-18447517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
206, 51
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr6:24327381-24327149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr6:40031948-40032181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr6:57164181-57164419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr6:55538369-55538129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr6:28482769-28483014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr6:21254796-21255042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr6:875571-875321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 190
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr6:21712610-21712859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 201
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr6:47651-47404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 30
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr6:25218683-25218935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr6:43188647-43188898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 50
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr6:48169699-48169946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
183, 111
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr6:63047330-63047580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr6:9737358-9737112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr6:27851950-27851705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr6:1817111-1816861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr6:2389773-2389520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr6:9235416-9235670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr6:28276414-28276668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr6:43389819-43390073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:76538-76284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
185, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:508402-508657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:2453863-2454119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:2867556-2867301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:3157472-3157217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:3937406-3937661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:5944547-5944296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:6578020-6577765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:7137438-7137183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:7449399-7449654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:8527050-8527305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:10045110-10045364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 188
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:11034353-11034098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:11288564-11288312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:11452963-11452708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:13489298-13489555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:13494187-13493932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:13531568-13531823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:13619717-13619462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:14225439-14225186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:15776676-15776931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:16645775-16646030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:17414699-17414446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:17557129-17557387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:18502910-18502655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:19819348-19819601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:22736802-22736551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:25348016-25347761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:25363455-25363710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:27541465-27541720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:27939681-27939936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:28184417-28184162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:32054784-32054529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:32298714-32298460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:32778775-32778520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:33489331-33489076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:36258858-36259113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:36299424-36299169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:36901914-36902169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:37217522-37217777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:37389213-37389468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 201
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:38053643-38053898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:38061516-38061770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 45
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:40278956-40279211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:40357973-40357718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:40710279-40710534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:43404344-43404598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 159
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:43430109-43429854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:44078270-44078521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:48290696-48290951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:49684812-49684557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:49794862-49795117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:52424775-52425030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:52431278-52431022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
143, 136
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:52482249-52482504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:53960257-53960002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:54202140-54201886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:54899857-54900112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:55361860-55362113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 144
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:56441176-56440921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:57522079-57522334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:57796143-57795888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:59052322-59052577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:62418776-62418521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:63178024-63178279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr6:64131544-64131799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr6:19719474-19719736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr6:41232365-41232620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr6:66304087-66303834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 61
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:25789833-25789572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:26728772-26728519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:28293921-28293663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:32121665-32121912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
177, 122
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:44372189-44371939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
177, 131
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:53345550-53345801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
176, 131
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:54293865-54294115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
175, 123
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr6:67544538-67544288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 131
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr6:3095202-3094938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr6:3153116-3153378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr6:12972300-12972566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr6:38872626-38872363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr6:62665680-62665944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr6:65676011-65676271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
231, 130
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr6:53401125-53401367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
232, 28
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:607016-607275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
178, 187
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:5958262-5958010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
248, 51
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:14839272-14839011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
181, 51
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:16410950-16411206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:30285443-30285703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:51835154-51835412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
188, 123
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:452386-452652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:2875141-2874874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:11169462-11169714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:21857640-21857906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:22043109-22042844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:22788209-22788476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:33884179-33883917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
208, 170
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:40250900-40250634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 57
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:55388641-55388906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr6:67818446-67818177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr6:4864784-4864529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr6:5280206-5279939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 57
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr6:12337739-12338009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
173, 51
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr6:1770441-1770180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
151, 84
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr6:5095800-5095527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr6:47540280-47540550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 204
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr6:53710870-53711133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr6:56849772-56850031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
185, 123
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr6:15242590-15242852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr6:21587667-21587394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
183, 219
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr6:24902383-24902120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
177, 23
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr6:47625205-47624942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
179, 60
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr6:48281749-48282011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 137
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr6:29077482-29077751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr6:60931151-60930879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr6:31535818-31535546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr6:36470811-36470542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr6:50746731-50747012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr6:25410360-25410633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr6:35181499-35181236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
186, 123
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr6:2185598-2185322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr6:28172974-28173251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 48
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr6:65711581-65711856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
231, 130
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:1911072-1911348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:7466747-7466472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:8195045-8195322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
52, 258
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:10013701-10013977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:10865844-10866120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:11869033-11868757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 215
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:13564032-13564308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:13945767-13946043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
136, 128
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:16765638-16765370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
187, 120
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:18649010-18648734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
183, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:20174286-20174562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:20580875-20580599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:23567704-23567428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:24237449-24237173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:30016113-30015837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:31520342-31520618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:34016819-34016543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 142
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:41798551-41798275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:43049915-43050189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:43999255-43998979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:46607605-46607329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:53271558-53271834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:53542565-53542290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:55239594-55239871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 258
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:56926951-56927227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:62038295-62038570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 259
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr6:67554134-67554411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 258
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr6:51869839-51870125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr6:9733077-9732801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
181, 107
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr6:37634544-37634827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 44
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr6:39358585-39358306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 19
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr6:36928407-36928702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr6:35842415-35842702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr6:54365569-54365284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:126204-125901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 161
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:444024-443721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 247
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:758127-758431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:2898666-2898969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:8207594-8207285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:10536035-10535732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:14198550-14198851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:14388822-14388519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:15881920-15881618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
202, 185
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:17935272-17934969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:25095778-25096081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:27485911-27486214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:28642980-28643283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:28674972-28674669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:33863510-33863819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:37736824-37737127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:38917135-38916832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:43896918-43896615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:45694765-45695068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:45765217-45764914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:45976403-45976706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:46637936-46638239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:52462780-52463083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 250
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:59834982-59835285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:64337868-64337565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:65839120-65838817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
178, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr6:68871025-68870722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr6:55582243-55581930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr6:12551022-12551337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr6:13688057-13687740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 126
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr6:20215492-20215166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr6:5366931-5366604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr6:46557812-46558140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 43
               

               
Conread position:
               
4-161
               

               
Cow position:
               
chr6:68272374-68272216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr6:52002125-52002295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr6:48468558-48468733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr6:1002479-1002277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr6:55608051-55607841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
184, 130
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr6:38853903-38853678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
184, 172
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr6:18080759-18080529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr6:16737776-16738000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr6:28111933-28111707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
172, 47
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr6:36195969-36196192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr6:41824073-41823840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 228
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr6:706899-707151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
172, 188
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr6:6181821-6181568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
172, 188
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr6:53178395-53178655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
184, 49
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr6:32024582-32024420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr6:6471017-6470852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr6:3719252-3719075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr6:55475006-55475174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr6:22804611-22804435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr6:33865334-33865162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr6:37331722-37331891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr6:10649262-10649071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
183, 64
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr6:47305084-47305296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr6:46465584-46465803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
183, 126
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr6:49398860-49398634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
183, 118
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr6:65862442-65862670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 135
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr6:50446003-50445768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 48
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr6:53933084-53932855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
183, 57
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr6:32125823-32126065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
228, 144
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr6:16049398-16049144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr6:56842916-56843157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr6:25358833-25359075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr6:35990465-35990230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
183, 16
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr6:57685915-57686160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr6:65910231-65910479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 103
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr6:52177141-52176868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
171, 7
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr6:42518730-42519027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr6:48567586-48567302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
6-123
               

               
Cow position:
               
chr6:11192695-11192578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr6:16492163-16491994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
6-178
               

               
Cow position:
               
chr6:11704955-11705124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr6:8753552-8753313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
170, 186
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr6:18049268-18049007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
181, 48
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr6:54991235-54990964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
183, 47
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chr6:54947124-54947300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr6:14886919-14886668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
7-266
               

               
Cow position:
               
chr6:45592058-45592320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chr6:41375512-41375692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
9-127
               

               
Cow position:
               
chr6:8599550-8599667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
9-178
               

               
Cow position:
               
chr6:26837625-26837460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr6:14063898-14063734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr6:17068059-17067863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr6:28559175-28559381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr6:9736879-9736673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr6:26915090-26915307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
176, 116
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr6:1784012-1783797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr6:3621873-3622098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr6:3936306-3936521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
179, 54
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr6:63272857-63272632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr6:61113510-61113738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr6:40138945-40138724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
176, 102
               

               
Conread position:
               
9-252
               

               
Cow position:
               
chr6:7103475-7103227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr6:24781803-24781550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
9-265
               

               
Cow position:
               
chr6:456941-457193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr6:42565446-42565705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
179, 69
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr6:23879150-23878875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 216
               

               
Conread position:
               
10-230
               

               
Cow position:
               
chr6:20098203-20097987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
179, 124
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr6:14958587-14958353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr6:35471765-35471495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
11-143
               

               
Cow position:
               
chr6:61443341-61443209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-159
               

               
Cow position:
               
chr6:60673310-60673455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
11-178
               

               
Cow position:
               
chr6:611326-611487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr6:27110352-27110574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
11-233
               

               
Cow position:
               
chr6:58031882-58032105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr6:16700021-16700246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
164, 115
               

               
Conread position:
               
11-257
               

               
Cow position:
               
chr6:8318404-8318156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr6:10176539-10176283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
165, 43
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr6:46860403-46860117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
12-124
               

               
Cow position:
               
chr6:62967124-62967012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
12-132
               

               
Cow position:
               
chr6:1866447-1866564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
12-142
               

               
Cow position:
               
chr6:3591886-3592016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-183
               

               
Cow position:
               
chr6:33147822-33147990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
164, 119
               

               
Conread position:
               
12-196
               

               
Cow position:
               
chr6:8209825-8209648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
12-208
               

               
Cow position:
               
chr6:16706770-16706958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 109
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr6:13040215-13040428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 165
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr6:15305349-15305552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
176, 41
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr6:61978418-61978203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
168, 157
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr6:19508671-19508461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr6:21311995-21311768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr6:44098848-44099067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr6:50120025-50119806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr6:6264407-6264622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr6:561380-561615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr6:54369136-54368908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
172, 42
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr6:6808609-6808371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr6:11637982-11637753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
174, 37
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr6:19329994-19329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 124
               

               
Conread position:
               
12-253
               

               
Cow position:
               
chr6:52022089-52021844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr6:7994707-7994463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
164, 125
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr6:31567936-31567690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr6:31585933-31585687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr6:40449754-40449508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr6:64431702-64431939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
218, 122
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr6:58075988-58076243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr6:23426956-23427214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr6:34075787-34076047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr6:31525812-31526067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
221, 42
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr6:58172948-58173208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
148, 67
               

               
Conread position:
               
12-275
               

               
Cow position:
               
chr6:35103564-35103308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
176, 41
               

               
Conread position:
               
12-306
               

               
Cow position:
               
chr6:19515763-19516055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 251
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr6:28680516-28680222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
164, 251
               

               
Conread position:
               
13-233
               

               
Cow position:
               
chr6:60859542-60859318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
13-254
               

               
Cow position:
               
chr6:41622947-41622702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
15-180
               

               
Cow position:
               
chr6:23888895-23888733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr6:3929088-3929297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr6:25407630-25407398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
15-254
               

               
Cow position:
               
chr6:1891079-1890840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
210, 38
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr6:39994695-39994455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 10
               

               
Conread position:
               
15-265
               

               
Cow position:
               
chr6:8804762-8804515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
16-209
               

               
Cow position:
               
chr6:21230733-21230927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
16-242
               

               
Cow position:
               
chr6:54885146-54884918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
160, 123
               

               
Conread position:
               
18-253
               

               
Cow position:
               
chr6:52478658-52478412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
18-254
               

               
Cow position:
               
chr6:27854289-27854529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
18-257
               

               
Cow position:
               
chr6:34475774-34475548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
158, 41
               

               
Conread position:
               
18-268
               

               
Cow position:
               
chr6:16593846-16594100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
20-257
               

               
Cow position:
               
chr6:130393-130156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
168, 34
               

               
Conread position:
               
20-257
               

               
Cow position:
               
chr6:61631848-61631601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 178
               

               
Conread position:
               
20-265
               

               
Cow position:
               
chr6:10422945-10423181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
176, 113
               

               
Conread position:
               
20-268
               

               
Cow position:
               
chr6:22968847-22969100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
21-174
               

               
Cow position:
               
chr6:16288646-16288502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
21-174
               

               
Cow position:
               
chr6:31048734-31048589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr6:34235661-34235467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 103
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr6:68049208-68049406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr6:9322929-9323136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr6:14201470-14201681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
112, 121
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr6:48573110-48572903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr6:60350527-60350315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
168, 155
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr6:4383265-4383467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
21-241
               

               
Cow position:
               
chr6:32420907-32421131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
155, 171
               

               
Conread position:
               
21-242
               

               
Cow position:
               
chr6:16103430-16103204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chr6:10332324-10332089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
159, 141
               

               
Conread position:
               
21-265
               

               
Cow position:
               
chr6:16746112-16746356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
160, 80
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr6:44194773-44194527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
168, 102
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr6:67950731-67950973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
167, 105
               

               
Conread position:
               
21-271
               

               
Cow position:
               
chr6:9026289-9026543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
161, 113
               

               
Conread position:
               
22-168
               

               
Cow position:
               
chr6:65846674-65846527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
22-178
               

               
Cow position:
               
chr6:6701495-6701338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
22-196
               

               
Cow position:
               
chr6:36202601-36202771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
166, 112
               

               
Conread position:
               
22-225
               

               
Cow position:
               
chr6:10106223-10106019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
139, 170
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr6:53460798-53460599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
166, 32
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr6:37148970-37149168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr6:38440955-38441156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
166, 112
               

               
Conread position:
               
22-234
               

               
Cow position:
               
chr6:28476955-28477159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
158, 104
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr6:17090372-17090591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
207, 31
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr6:38218445-38218661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
166, 112
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr6:30826261-30826031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
22-254
               

               
Cow position:
               
chr6:54490967-54490731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
156, 131
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr6:56041849-56041618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
160, 112
               

               
Conread position:
               
22-264
               

               
Cow position:
               
chr6:49685358-49685598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
157, 104
               

               
Conread position:
               
22-265
               

               
Cow position:
               
chr6:52025878-52025638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
22-269
               

               
Cow position:
               
chr6:15938075-15937833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
22-271
               

               
Cow position:
               
chr6:67304575-67304823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr6:66433721-66433978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
159, 112
               

               
Conread position:
               
22-314
               

               
Cow position:
               
chr6:51581486-51581185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 287
               

               
Conread position:
               
23-181
               

               
Cow position:
               
chr6:64436556-64436399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
24-180
               

               
Cow position:
               
chr6:6188030-6188179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
24-210
               

               
Cow position:
               
chr6:54140589-54140767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr6:21542095-21542300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
164, 107
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr6:46865824-46865609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr6:51674693-51674893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
157, 105
               

               
Conread position:
               
24-234
               

               
Cow position:
               
chr6:20605709-20605917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
24-243
               

               
Cow position:
               
chr6:10695644-10695860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
24-251
               

               
Cow position:
               
chr6:19401637-19401857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
209, 99
               

               
Conread position:
               
24-266
               

               
Cow position:
               
chr6:60239613-60239378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
164, 27
               

               
Conread position:
               
24-269
               

               
Cow position:
               
chr6:13367070-13367302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
25-203
               

               
Cow position:
               
chr6:51398577-51398752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
163, 109
               

               
Conread position:
               
25-209
               

               
Cow position:
               
chr6:59302048-59301864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
163, 12
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr6:388947-389150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
160, 64
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr6:1022553-1022760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
25-257
               

               
Cow position:
               
chr6:7824539-7824770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
209, 28
               

               
Conread position:
               
25-257
               

               
Cow position:
               
chr6:45160515-45160287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
157, 35
               

               
Conread position:
               
26-257
               

               
Cow position:
               
chr6:55282513-55282280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr6:25773604-25773371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
155, 100
               

               
Conread position:
               
26-265
               

               
Cow position:
               
chr6:41733404-41733640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 105
               

               
Conread position:
               
27-190
               

               
Cow position:
               
chr6:55374519-55374358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
27-233
               

               
Cow position:
               
chr6:9008833-9008631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
161, 107
               

               
Conread position:
               
27-233
               

               
Cow position:
               
chr6:38207717-38207511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
27-293
               

               
Cow position:
               
chr6:38614602-38614857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
206, 99
               

               
Conread position:
               
28-175
               

               
Cow position:
               
chr6:6117770-6117628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
28-180
               

               
Cow position:
               
chr6:7253647-7253495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-210
               

               
Cow position:
               
chr6:14949702-14949521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
155, 105
               

               
Conread position:
               
28-224
               

               
Cow position:
               
chr6:53651818-53652013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 107
               

               
Conread position:
               
28-322
               

               
Cow position:
               
chr6:60439182-60439480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
148, 225
               

               
Conread position:
               
29-196
               

               
Cow position:
               
chr6:21184736-21184901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
159, 94
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr6:34031448-34031643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
156, 89
               

               
Conread position:
               
29-253
               

               
Cow position:
               
chr6:899504-899288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
159, 51
               

               
Conread position:
               
30-233
               

               
Cow position:
               
chr6:7694572-7694368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
30-241
               

               
Cow position:
               
chr6:1538577-1538791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
30-242
               

               
Cow position:
               
chr6:7190338-7190127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
162, 104
               

               
Conread position:
               
30-242
               

               
Cow position:
               
chr6:55936195-55935989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
166, 104
               

               
Conread position:
               
30-275
               

               
Cow position:
               
chr6:23248182-23247938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
154, 162
               

               
Conread position:
               
30-299
               

               
Cow position:
               
chr6:54430600-54430874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
151, 253
               

               
Conread position:
               
31-254
               

               
Cow position:
               
chr6:242596-242814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
160, 87
               

               
Conread position:
               
31-267
               

               
Cow position:
               
chr6:15923215-15922980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
204, 23
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr6:45690810-45690618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr6:8965873-8966071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr6:21110752-21110945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr6:60442202-60442399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
143, 22
               

               
Conread position:
               
32-257
               

               
Cow position:
               
chr6:48344111-48344339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
32-264
               

               
Cow position:
               
chr6:5609657-5609432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 102
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr6:6460325-6460602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chr6:7539358-7539542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr6:55366538-55366334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 197
               

               
Conread position:
               
34-238
               

               
Cow position:
               
chr6:17997530-17997328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
34-251
               

               
Cow position:
               
chr6:30786363-30786154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
199, 92
               

               
Conread position:
               
34-271
               

               
Cow position:
               
chr6:66453586-66453820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
35-224
               

               
Cow position:
               
chr6:59015776-59015587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
35-251
               

               
Cow position:
               
chr6:65702615-65702401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
35-272
               

               
Cow position:
               
chr6:59620455-59620690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 104
               

               
Conread position:
               
36-242
               

               
Cow position:
               
chr6:62324777-62324985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
37-208
               

               
Cow position:
               
chr6:2896539-2896711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
143, 69
               

               
Conread position:
               
37-251
               

               
Cow position:
               
chr6:24515405-24515196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
145, 97
               

               
Conread position:
               
37-257
               

               
Cow position:
               
chr6:59069840-59069619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
143, 152
               

               
Conread position:
               
38-252
               

               
Cow position:
               
chr6:53139140-53138919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
138, 155
               

               
Conread position:
               
38-266
               

               
Cow position:
               
chr6:58439756-58439978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 122
               

               
Conread position:
               
38-293
               

               
Cow position:
               
chr6:23532452-23532695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
144, 85
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr6:1886875-1886687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
40-254
               

               
Cow position:
               
chr6:57680644-57680426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
41-225
               

               
Cow position:
               
chr6:7989621-7989437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
135, 31
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr6:12629817-12630005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
41-258
               

               
Cow position:
               
chr6:54864874-54864662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
42-233
               

               
Cow position:
               
chr6:61137158-61137354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
43-271
               

               
Cow position:
               
chr6:38641292-38641515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
190, 86
               

               
Conread position:
               
43-299
               

               
Cow position:
               
chr6:6098488-6098236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
145, 90
               

               
Conread position:
               
44-265
               

               
Cow position:
               
chr6:445106-445337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
144, 221
               

               
Conread position:
               
45-218
               

               
Cow position:
               
chr6:51463820-51463647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
143, 131
               

               
Conread position:
               
45-242
               

               
Cow position:
               
chr6:415891-416091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
46-233
               

               
Cow position:
               
chr6:66131105-66131286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
47-284
               

               
Cow position:
               
chr6:16423496-16423738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
48-225
               

               
Cow position:
               
chr6:46245524-46245345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 83
               

               
Conread position:
               
51-272
               

               
Cow position:
               
chr6:33276841-33277064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
52-293
               

               
Cow position:
               
chr6:63720002-63720238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 74
               

               
Conread position:
               
54-200
               

               
Cow position:
               
chr6:89103-88957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
131, 137
               

               
Conread position:
               
54-233
               

               
Cow position:
               
chr6:6400753-6400931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
54-233
               

               
Cow position:
               
chr6:21456885-21456708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 95
               

               
Conread position:
               
54-234
               

               
Cow position:
               
chr6:33918046-33917869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
54-263
               

               
Cow position:
               
chr6:52412659-52412873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 202
               

               
Conread position:
               
54-296
               

               
Cow position:
               
chr6:37467734-37467501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
179, 85
               

               
Conread position:
               
56-266
               

               
Cow position:
               
chr6:53519816-53519606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 77
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr6:8788227-8788019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
73-211
               

               
Cow position:
               
chr6:37603347-37603481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
73-222
               

               
Cow position:
               
chr6:37783238-37783389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
79-267
               

               
Cow position:
               
chr6:60819345-60819533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
80-238
               

               
Cow position:
               
chr6:5114216-5114059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
80-242
               

               
Cow position:
               
chr6:35993408-35993576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 117
               

               
Conread position:
               
80-242
               

               
Cow position:
               
chr6:47355655-47355811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
82-275
               

               
Cow position:
               
chr6:15447375-15447178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 110
               

               
Conread position:
               
85-263
               

               
Cow position:
               
chr6:44984162-44984343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
87-265
               

               
Cow position:
               
chr6:12543095-12542918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 47
               
Show alignments to all cow chromosomes.