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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8012G21.3
        

               
Conread position:
               
1-170
               

               
Cow position:
               
chr9:27345120-27345290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr9:9443275-9443486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr9:48564412-48564193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 200
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr9:53109839-53109638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
187, 58
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr9:11146338-11146561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
188, 167
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr9:22616936-22616719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
187, 52
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr9:20393811-20394028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:2287364-2287133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
175, 130
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:7363352-7363113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:18121522-18121290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:32973196-32973423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:33218635-33218861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:62442598-62442379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 49
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr9:64155539-64155772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
187, 175
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr9:9016902-9017146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:1650342-1650084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 192
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:22572898-22573155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:47799473-47799216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr9:12194395-12194135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
155, 162
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr9:45974512-45974254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 162
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr9:18162835-18163101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr9:3388008-3387741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr9:54997708-54997980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr9:28983501-28983233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr9:31124606-31124886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 137
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr9:44202261-44201983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr9:18381177-18380902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr9:5226848-5227156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 53
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr9:23028117-23027826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr9:20667188-20666883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
175, 262
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr9:1846695-1846882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
3-108
               

               
Cow position:
               
chr9:26438252-26438357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-120
               

               
Cow position:
               
chr9:28739986-28739868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-124
               

               
Cow position:
               
chr9:34523541-34523414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-124
               

               
Cow position:
               
chr9:37943093-37942975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
3-127
               

               
Cow position:
               
chr9:22456380-22456256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-129
               

               
Cow position:
               
chr9:8307446-8307317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr9:6366222-6366351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr9:10634703-10634832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
3-135
               

               
Cow position:
               
chr9:26344670-26344800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr9:2483349-2483209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr9:48809830-48809681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
120, 142
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr9:37986480-37986329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr9:5415201-5415355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr9:46657228-46657069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr9:8636972-8636805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr9:52409140-52409303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr9:3744647-3744815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr9:3532594-3532756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 95
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr9:44516011-44515841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr9:6952405-6952235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr9:2065343-2065167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr9:5455608-5455434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr9:21840389-21840219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr9:26431337-26431161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr9:30825315-30825139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr9:38676509-38676685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr9:25037565-25037389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr9:37510332-37510159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr9:5340947-5340775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr9:44579388-44579208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:4284955-4285133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:17410874-17411039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:18215599-18215766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:34696981-34697156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:44517873-44517701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:45484476-45484302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:48017508-48017682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:53412935-53413115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr9:60081459-60081296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr9:42571048-42571228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:3208290-3208471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:6253396-6253576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 152
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:6707077-6706896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:8900612-8900432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:17391922-17392103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:18478063-18477882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:20092476-20092658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:24428302-24428482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
5, 164
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:28654258-28654439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:30661554-30661735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:30821553-30821370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:40978283-40978102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr9:58233148-58233329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr9:49434280-49434461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr9:54177930-54178114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr9:21963294-21963478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr9:30145478-30145666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr9:8418061-8418256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
177, 81
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr9:25969661-25969468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 137
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr9:5345563-5345364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr9:27085778-27085581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr9:59454066-59453870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr9:5839300-5839105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr9:10940433-10940635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr9:54996454-54996655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr9:42405708-42405910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr9:1990717-1990512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:12037464-12037264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
119, 132
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:13994503-13994296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 138
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:14724296-14724090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:15335665-15335459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 31
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:26518519-26518728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 192
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:37157780-37157573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:40316954-40317161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:43023736-43023530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr9:52819168-52818965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 65
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr9:2398317-2398516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
182, 126
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr9:2718143-2718352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 190
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr9:3053918-3054125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 29
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr9:20406951-20406745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
181, 51
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr9:33100827-33101031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
188, 51
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr9:37017199-37016995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 131
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr9:33823406-33823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr9:26404104-26403886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr9:28773432-28773223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
184, 123
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr9:5268871-5268648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr9:2715253-2715032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr9:11555531-11555753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr9:29516055-29515833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr9:33726044-33726266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr9:3520626-3520851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr9:57951015-57951228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
178, 29
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr9:3192363-3192591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr9:10632361-10632137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr9:44467034-44467262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
181, 186
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr9:28948168-28947944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr9:38184163-38184395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 136
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr9:42585311-42585540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
178, 93
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:3379426-3379211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:5218865-5219080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
185, 57
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:5621716-5621946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
173, 18
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:5628651-5628880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:8937463-8937233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:10308692-10308920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 148
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:10566532-10566295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 195
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:11317790-11317560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:17740630-17740859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:19542223-19541993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:19714385-19714163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:20739018-20738790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 132
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:22151773-22151994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:22227770-22227994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:22318653-22318439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:25514871-25515102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:26065104-26065329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 123
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:28726411-28726632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
185, 75
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:29776282-29776513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:32812661-32812433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:34310349-34310115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:35904436-35904657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
182, 131
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:36445936-36445717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:38344210-38343979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 174
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:47954910-47955139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
171, 66
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:50976931-50977159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
175, 131
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:51318073-51317844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:52407485-52407255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
179, 133
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:53608079-53608306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
185, 75
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:55256235-55256462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
185, 61
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr9:55534295-55534529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr9:3547025-3547257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr9:4976866-4976634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr9:8387945-8388174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
171, 128
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr9:37528771-37528541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 144
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr9:28969770-28970000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr9:35375736-35375515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
185, 49
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr9:55314098-55313866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 223
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:10327067-10327309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:16180066-16180308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:17579630-17579390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 189
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:18505712-18505470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:22755105-22754864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 45
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:27781079-27780837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:29106862-29107102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
138, 128
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:31811345-31811583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:33388593-33388823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
173, 116
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:37967426-37967187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:53631213-53631454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 62
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:58251861-58251621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:59539835-59540076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 105
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr9:1855594-1855343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr9:5510039-5509800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 142
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr9:9491103-9490869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
184, 12
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr9:9723568-9723807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
195, 51
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr9:31347268-31347032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr9:34957737-34957976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
182, 56
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr9:39971348-39971121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
229, 86
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr9:31640003-31640250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr9:40327235-40327482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr9:3932280-3932029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr9:5158771-5159023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
191, 138
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr9:5393365-5393116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr9:29808776-29808524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr9:11215687-11215940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr9:19539412-19539156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr9:24726363-24726611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
170, 131
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr9:10082463-10082717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr9:12259423-12259179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
208, 126
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr9:12284874-12284620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr9:42426727-42426980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
150, 125
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr9:50519596-50519343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 31
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr9:54681816-54681573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr9:59689346-59689598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:173942-173688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:761335-761589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:776968-776713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:1061863-1061609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
170, 110
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:1296084-1295830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:2393792-2393537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 207
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:2421960-2422215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:3004508-3004252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 242
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:5594815-5594566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
185, 131
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:7048551-7048805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:7410097-7409842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
175, 131
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:8099511-8099757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
178, 17
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:10803502-10803757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:10919235-10919490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:13620164-13619909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:14003809-14004062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:15843250-15843505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:17617409-17617663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 116
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:19222726-19222981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:19303374-19303629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:22626104-22626359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 194
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:22656631-22656886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:23576163-23576419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:24591842-24592097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:25964509-25964766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
151, 161
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:26326578-26326833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:26718909-26719163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:27936353-27936608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:27994025-27993770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:28244668-28244413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:28292845-28292590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:29149115-29148860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:31104163-31104418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:31281550-31281805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:31489300-31489555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:31528332-31528077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:32495632-32495377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:34237923-34237669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:34879412-34879666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:34894484-34894229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:36357200-36357454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:36685347-36685602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:36687211-36686956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:37108939-37109194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:39774758-39774503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:41145752-41145497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 84
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:41313565-41313820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:42475254-42474999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:43806258-43806005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:44211337-44211592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 215
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:46683222-46683475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:47045780-47046035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:47171886-47172144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:50002241-50001987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:53565109-53565364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:53744161-53744416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:54412798-54412548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:54483776-54484031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:55589390-55589135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:56032014-56032254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
192, 50
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:56253216-56252962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:56300765-56300513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 245
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:56529721-56529466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:56566908-56567163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:56837340-56837595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:59149306-59149561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:59386465-59386704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:59668539-59668795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:60554384-60554638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:61224156-61223901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:62817387-62817132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:63343460-63343715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:64014038-64013783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr9:52504989-52505247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
177, 21
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr9:50899819-50899561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr9:4646019-4646267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
185, 6
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr9:9461342-9461594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr9:9957137-9956888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr9:10127355-10127611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr9:26057137-26057380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 46
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr9:54528830-54528573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
189, 165
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr9:35369195-35368940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
173, 150
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr9:8534371-8534633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
181, 46
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr9:9566866-9566604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 110
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr9:45877377-45877641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr9:54672442-54672179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 254
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr9:32676997-32676732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr9:1982016-1982282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 190
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr9:38961122-38961380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:241522-241789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:1520414-1520685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:3057795-3057528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:4674076-4674343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 34
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:6933757-6934021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
185, 108
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:8187901-8188167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:8997871-8997602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:10761649-10761915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 128
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:25996809-25996543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 108
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:29082733-29082466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:42208909-42209177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
141, 159
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:42703685-42703953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:50327534-50327801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:55074820-55075081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr9:62657107-62656855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
194, 115
               

               
Conread position:
               
3-267
               

               
Cow position:
               
chr9:29006875-29006612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
184, 108
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr9:12275268-12274997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr9:61997281-61997547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 51
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr9:1951955-1952220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 51
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr9:21030632-21030359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 248
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr9:42998147-42998420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr9:43871287-43871026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
171, 105
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr9:64050245-64050511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr9:5319944-5319681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
185, 131
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr9:6089418-6089139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr9:8868820-8869093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
21, 213
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr9:47499882-47500161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 259
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr9:44821991-44822259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr9:54924948-54924670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 267
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr9:6693958-6694232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr9:8998670-8998398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
185, 109
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr9:31078764-31079037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr9:41416665-41416394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
177, 51
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr9:42498144-42497870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 131
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr9:47882453-47882178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
176, 76
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr9:54610917-54611190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
185, 34
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr9:11830323-11830054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr9:8236078-8236356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
185, 261
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:3933919-3934195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 144
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:4939661-4939385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 189
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:6735943-6736217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 213
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:9093481-9093205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:10666200-10666476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:11057095-11056819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 31
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:11297045-11296769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:12379278-12379550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 144
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:16497450-16497172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
59, 259
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:17060525-17060249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 257
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:18710327-18710051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:22623318-22623042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:27301823-27301547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:28786173-28786448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 240
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:31361340-31361064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:32236574-32236299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 103
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:37260511-37260235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:37483801-37483525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:38623954-38624232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
122, 259
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:42357370-42357092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 269
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:44169937-44170213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 156
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:51105071-51105347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr9:60410235-60410511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr9:50606638-50606915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
185, 118
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr9:44831742-44832020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr9:7634583-7634304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr9:5433946-5433664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr9:5501164-5500884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
185, 42
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr9:5763315-5763602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
181, 188
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr9:16300253-16300538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr9:21459840-21460123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr9:22361328-22361041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr9:30402105-30402394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
185, 138
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr9:23430832-23431117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr9:61739231-61738952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr9:52484606-52484893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr9:15805606-15805898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
226, 209
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr9:44751777-44751475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:246462-246762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
173, 57
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:1053565-1053262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:6441015-6441318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:7872562-7872865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:9611054-9610751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:10643105-10642798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 264
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:13181743-13182038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
173, 30
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:19593146-19593453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 105
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:23000838-23001141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:23362514-23362211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:25645247-25644944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:27302050-27302353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
170, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:35304579-35304882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:37251845-37252148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:40164614-40164917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:42696801-42697104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:42831582-42831279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:43526915-43526612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:43845228-43844925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:45853916-45853613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:46874982-46874679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:47961484-47961787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:62546318-62546016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
173, 256
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr9:63564322-63564625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
173, 260
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr9:64011402-64011065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr9:36586505-36586675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr9:29841203-29841025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr9:20237694-20237884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 56
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr9:18139981-18140175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
157, 85
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr9:58647356-58647140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr9:3594213-3594442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr9:11299383-11299602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
183, 74
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr9:46316474-46316711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 121
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr9:21888483-21888231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
4-257
               

               
Cow position:
               
chr9:1950236-1949981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
5-129
               

               
Cow position:
               
chr9:21943872-21943996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-135
               

               
Cow position:
               
chr9:13186414-13186544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr9:49271037-49271208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr9:58451786-58451965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr9:17568451-17568254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr9:31077365-31077589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 128
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr9:57896814-57897029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr9:1569737-1569509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 126
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr9:27289466-27289243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr9:37192973-37192744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
171, 188
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr9:32540222-32539991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr9:21823592-21823826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr9:9199472-9199703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
206, 54
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr9:47385470-47385713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
183, 224
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr9:6064981-6065230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr9:39681671-39681407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr9:49982784-49983033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
229, 186
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr9:34016245-34016496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr9:214150-214400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr9:5531915-5531663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr9:30334231-30333979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
171, 126
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr9:53778013-53778261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr9:20848249-20847984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr9:43814752-43814497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
182, 48
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr9:26434751-26435003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 124
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr9:38753875-38754141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr9:824268-824012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 113
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr9:9552398-9552141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
224, 27
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr9:56773392-56773128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
183, 73
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr9:9516458-9516715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
185, 49
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr9:34666721-34666454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
180, 47
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr9:45756669-45756385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
281, 14
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr9:764223-763922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
171, 245
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr9:5442302-5441995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
155, 44
               

               
Conread position:
               
6-181
               

               
Cow position:
               
chr9:34355617-34355788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr9:1350134-1350353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
178, 57
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr9:20416198-20416420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr9:10857855-10858091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr9:36490583-36490827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 120
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr9:648086-647833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
226, 15
               

               
Conread position:
               
6-266
               

               
Cow position:
               
chr9:34000300-34000569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr9:64091999-64091722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr9:18243165-18242989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
8-233
               

               
Cow position:
               
chr9:61022920-61022699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
9-113
               

               
Cow position:
               
chr9:16811004-16811107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
9-179
               

               
Cow position:
               
chr9:16538492-16538668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-195
               

               
Cow position:
               
chr9:54666214-54666030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
9-196
               

               
Cow position:
               
chr9:49544752-49544932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr9:47046109-47046309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr9:27289972-27290173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr9:6880077-6879864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
178, 15
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr9:62357222-62357434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
178, 114
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr9:35167477-35167261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr9:33681987-33681772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 51
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr9:38793328-38793102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 169
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr9:50080737-50080958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
179, 125
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr9:14974617-14974843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
167, 153
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr9:20321804-20322028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr9:20681097-20681329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
9-251
               

               
Cow position:
               
chr9:59172069-59172317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr9:26391073-26390820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr9:10092086-10092343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
166, 21
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr9:20942303-20942585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
167, 44
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr9:22114325-22114570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
178, 133
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr9:45285223-45285478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 124
               

               
Conread position:
               
10-299
               

               
Cow position:
               
chr9:53257756-53258029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
11-193
               

               
Cow position:
               
chr9:47926213-47926038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr9:3185585-3185333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
146, 82
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr9:6603831-6603538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
165, 123
               

               
Conread position:
               
12-171
               

               
Cow position:
               
chr9:29812551-29812394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr9:25933191-25933355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
117, 128
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr9:8729415-8729583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr9:2034477-2034298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr9:29338726-29338916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 166
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr9:53602718-53602530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr9:17785152-17785363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr9:31662775-31662561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
12-225
               

               
Cow position:
               
chr9:14796474-14796681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
176, 27
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr9:18008564-18008770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
177, 12
               

               
Conread position:
               
12-232
               

               
Cow position:
               
chr9:5161765-5161975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
176, 20
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr9:3807431-3807652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
176, 201
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr9:6192153-6192373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
172, 191
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr9:18252621-18252834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr9:22802823-22802604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
12-233
               

               
Cow position:
               
chr9:30664473-30664695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr9:52689318-52689537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
12-235
               

               
Cow position:
               
chr9:34103583-34103363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
99, 118
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr9:48343907-48343678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr9:10283944-10283698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr9:23388370-23388611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
12-257
               

               
Cow position:
               
chr9:36623146-36623382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
172, 114
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr9:63746110-63745866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
169, 119
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr9:25597430-25597686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
164, 242
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr9:5246154-5245914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
172, 42
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr9:16218337-16218594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 106
               

               
Conread position:
               
12-266
               

               
Cow position:
               
chr9:58439476-58439727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr9:18002643-18002903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
168, 122
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr9:20810758-20811034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr9:1997438-1997168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
176, 58
               

               
Conread position:
               
12-293
               

               
Cow position:
               
chr9:29184828-29185106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
221, 42
               

               
Conread position:
               
12-303
               

               
Cow position:
               
chr9:12428197-12428489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
67, 204
               

               
Conread position:
               
12-318
               

               
Cow position:
               
chr9:49220114-49219804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr9:28747216-28747523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
173, 117
               

               
Conread position:
               
13-119
               

               
Cow position:
               
chr9:59197685-59197791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-240
               

               
Cow position:
               
chr9:27697424-27697649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
15-251
               

               
Cow position:
               
chr9:45170866-45171099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 103
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr9:3924916-3924718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr9:36067207-36066997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
172, 38
               

               
Conread position:
               
18-210
               

               
Cow position:
               
chr9:50691282-50691475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr9:22696516-22696308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr9:32371460-32371673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr9:26992876-26993099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
18-251
               

               
Cow position:
               
chr9:15982778-15983015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
18-251
               

               
Cow position:
               
chr9:22443312-22443560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr9:35101166-35100964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
163, 115
               

               
Conread position:
               
19-252
               

               
Cow position:
               
chr9:4928928-4928693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
216, 44
               

               
Conread position:
               
20-226
               

               
Cow position:
               
chr9:17871808-17872011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
20-233
               

               
Cow position:
               
chr9:50076363-50076146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr9:10118365-10118592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
20-258
               

               
Cow position:
               
chr9:52001303-52001065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
156, 14
               

               
Conread position:
               
21-136
               

               
Cow position:
               
chr9:33697359-33697474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-193
               

               
Cow position:
               
chr9:2977678-2977509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
21-195
               

               
Cow position:
               
chr9:32306145-32306312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr9:14961245-14961049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr9:27052036-27052249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr9:30020276-30020057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr9:32306943-32307148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr9:35533655-35533864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr9:36410055-36410269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
21-235
               

               
Cow position:
               
chr9:15950858-15951066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
21-242
               

               
Cow position:
               
chr9:15215384-15215609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
154, 116
               

               
Conread position:
               
21-257
               

               
Cow position:
               
chr9:40542410-40542182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
21-257
               

               
Cow position:
               
chr9:55084000-55084236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
160, 113
               

               
Conread position:
               
21-263
               

               
Cow position:
               
chr9:36999764-37000004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
154, 113
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr9:35305820-35306063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr9:58133727-58133964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
167, 33
               

               
Conread position:
               
21-265
               

               
Cow position:
               
chr9:34762556-34762795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
21-293
               

               
Cow position:
               
chr9:29034739-29035005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
22-135
               

               
Cow position:
               
chr9:36353986-36354099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-174
               

               
Cow position:
               
chr9:49689233-49689084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr9:25958709-25958528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr9:58674037-58673842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 86
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr9:26310854-26310650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
162, 167
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr9:52578237-52578447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 101
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr9:34093130-34093373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr9:49764952-49764718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
211, 109
               

               
Conread position:
               
22-263
               

               
Cow position:
               
chr9:41789574-41789340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
22-266
               

               
Cow position:
               
chr9:5327547-5327310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
22-266
               

               
Cow position:
               
chr9:26278881-26279118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
213, 26
               

               
Conread position:
               
23-242
               

               
Cow position:
               
chr9:33940902-33940681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
159, 111
               

               
Conread position:
               
23-293
               

               
Cow position:
               
chr9:4861684-4861415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 31
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr9:56453626-56453428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr9:30138419-30138217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr9:35850192-35849965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr9:41513913-41513685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
159, 102
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr9:31777398-31777602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
25-257
               

               
Cow position:
               
chr9:44710114-44709885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
25-264
               

               
Cow position:
               
chr9:64516804-64517044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
26-183
               

               
Cow position:
               
chr9:5400008-5399858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
26-253
               

               
Cow position:
               
chr9:20091330-20091113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
162, 54
               

               
Conread position:
               
26-274
               

               
Cow position:
               
chr9:29825321-29825081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 28
               

               
Conread position:
               
27-204
               

               
Cow position:
               
chr9:51557065-51557248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
27-242
               

               
Cow position:
               
chr9:34468302-34468504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
27-250
               

               
Cow position:
               
chr9:1984231-1984457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
28-224
               

               
Cow position:
               
chr9:9416117-9416307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
28-264
               

               
Cow position:
               
chr9:8338320-8338084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
205, 148
               

               
Conread position:
               
30-192
               

               
Cow position:
               
chr9:13993952-13993791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
30-230
               

               
Cow position:
               
chr9:60037943-60037745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
30-246
               

               
Cow position:
               
chr9:8599891-8599676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
152, 91
               

               
Conread position:
               
30-257
               

               
Cow position:
               
chr9:3070135-3070359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
146, 104
               

               
Conread position:
               
30-263
               

               
Cow position:
               
chr9:17634543-17634782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
150, 185
               

               
Conread position:
               
31-224
               

               
Cow position:
               
chr9:13670924-13670728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 159
               

               
Conread position:
               
31-226
               

               
Cow position:
               
chr9:18072831-18073019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 40
               

               
Conread position:
               
31-232
               

               
Cow position:
               
chr9:8288904-8288707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr9:59794994-59795199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
154, 56
               

               
Conread position:
               
32-272
               

               
Cow position:
               
chr9:10144186-10144432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 145
               

               
Conread position:
               
32-291
               

               
Cow position:
               
chr9:59013049-59013309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
158, 85
               

               
Conread position:
               
33-225
               

               
Cow position:
               
chr9:51205006-51204817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
33-257
               

               
Cow position:
               
chr9:31626434-31626212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
155, 136
               

               
Conread position:
               
34-177
               

               
Cow position:
               
chr9:3762641-3762495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
34-233
               

               
Cow position:
               
chr9:61846866-61847062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 95
               

               
Conread position:
               
34-257
               

               
Cow position:
               
chr9:35203168-35202940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 158
               

               
Conread position:
               
34-264
               

               
Cow position:
               
chr9:24997232-24997465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
34-276
               

               
Cow position:
               
chr9:44914812-44915044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
35-257
               

               
Cow position:
               
chr9:26086350-26086125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 156
               

               
Conread position:
               
36-290
               

               
Cow position:
               
chr9:10877584-10877843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 97
               

               
Conread position:
               
37-233
               

               
Cow position:
               
chr9:5756722-5756910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
37-233
               

               
Cow position:
               
chr9:37069288-37069481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
151, 94
               

               
Conread position:
               
37-254
               

               
Cow position:
               
chr9:1751616-1751402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
37-266
               

               
Cow position:
               
chr9:5532233-5532001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
37-270
               

               
Cow position:
               
chr9:51566207-51566444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
37-299
               

               
Cow position:
               
chr9:47472977-47472710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
143, 97
               

               
Conread position:
               
38-233
               

               
Cow position:
               
chr9:24887477-24887288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
38-257
               

               
Cow position:
               
chr9:58204943-58204726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
38-264
               

               
Cow position:
               
chr9:55287611-55287837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 154
               

               
Conread position:
               
38-270
               

               
Cow position:
               
chr9:17929053-17928810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
39-302
               

               
Cow position:
               
chr9:30749306-30749567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
137, 86
               

               
Conread position:
               
40-278
               

               
Cow position:
               
chr9:19637361-19637596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
41-258
               

               
Cow position:
               
chr9:4128506-4128722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
44-251
               

               
Cow position:
               
chr9:32732411-32732621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
46-233
               

               
Cow position:
               
chr9:47869278-47869097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
46-234
               

               
Cow position:
               
chr9:55118350-55118167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
50-242
               

               
Cow position:
               
chr9:8546586-8546397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 84
               

               
Conread position:
               
51-233
               

               
Cow position:
               
chr9:33598248-33598069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
137, 83
               

               
Conread position:
               
51-251
               

               
Cow position:
               
chr9:34918999-34919196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
51-254
               

               
Cow position:
               
chr9:41653056-41652851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
140, 125
               

               
Conread position:
               
51-266
               

               
Cow position:
               
chr9:41995981-41995762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
54-257
               

               
Cow position:
               
chr9:6225188-6225392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
54-265
               

               
Cow position:
               
chr9:49983428-49983636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
179, 88
               

               
Conread position:
               
55-231
               

               
Cow position:
               
chr9:16182227-16182399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
58-242
               

               
Cow position:
               
chr9:38875314-38875500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 75
               

               
Conread position:
               
64-233
               

               
Cow position:
               
chr9:58979655-58979486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 127
               

               
Conread position:
               
75-304
               

               
Cow position:
               
chr9:6840254-6840013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
79-293
               

               
Cow position:
               
chr9:11319393-11319603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
80-226
               

               
Cow position:
               
chr9:33119644-33119790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 96
               

               
Conread position:
               
80-233
               

               
Cow position:
               
chr9:8563079-8562926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
102, 111
               

               
Conread position:
               
81-257
               

               
Cow position:
               
chr9:40604187-40604006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 50
               
Show alignments to all cow chromosomes.