Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8012J06.5 |
| Conread position: | 1-325 |
| Cow position: | chr10:9031340-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-356 |
| Cow position: | chr10:21938985-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 118, 124 |
| Conread position: | 1-414 |
| Cow position: | chr10:9010481-9010069 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 1-414 |
| Cow position: | chr10:21939069-21938658 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 317, 0 |
| Conread position: | 1-415 |
| Cow position: | chr10:8996753-8996338 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 122 |
| Conread position: | 1-417 |
| Cow position: | chr10:9010397-9009982 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 203, 213 |
| Conread position: | 1-418 |
| Cow position: | chr10:8996501-8996085 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 1-424 |
| Cow position: | chr10:8996585-8996162 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 419, 409 |
| Conread position: | 1-429 |
| Cow position: | chr10:8996417-8995991 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 4-374 |
| Cow position: | chr10:9010562-9010192 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 5-417 |
| Cow position: | chr10:9010309-9009898 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 5-418 |
| Cow position: | chr10:8996833-8996421 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 0 |
| Conread position: | 7-418 |
| Cow position: | chr10:8996663-8996253 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 19-373 |
| Cow position: | chr10:21939134-21938781 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 54-356 |
| Cow position: | chr10:9031309-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-414 |
| Cow position: | chr10:9010593-9010237 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 60-417 |
| Cow position: | chr10:9031231-9031587 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 74-417 |
| Cow position: | chr10:21939164-21938822 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 77-418 |
| Cow position: | chr10:8996845-8996505 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 138-418 |
| Cow position: | chr10:9010596-9010317 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 272, 0 |
| Conread position: | 157-418 |
| Cow position: | chr10:8996849-8996589 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 219-425 |
| Cow position: | chr10:8996874-8996665 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 158 |
| Conread position: | 225-417 |
| Cow position: | chr10:9031228-9031419 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 185, 0 |
Show alignments to all cow chromosomes.