Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8012J06.5
        

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               113, 130
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               116, 127
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               1-406
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-407
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               360, 368
               

               Conread position:
               1-414
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               1-415
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               409, 0
               

               Conread position:
               1-416
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 124
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 170
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 363
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               409, 0
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 369
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               408, 0
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 40
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               408, 0
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 124
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               281, 293
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               361, 373
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               382, 366
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               307, 295
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 105
               

               Conread position:
               1-869
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               729
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               599, 419
               

               Conread position:
               2-417
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 116
               

               Conread position:
               2-417
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 366
               

               Conread position:
               2-418
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               407, 0
               

               Conread position:
               2-429
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               269
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               408, 0
               

               Conread position:
               3-418
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               278, 302
               

               Conread position:
               7-418
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               7-418
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 119
               

               Conread position:
               7-418
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               7-418
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               402, 0
               

               Conread position:
               16-417
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               393, 0
               

               Conread position:
               18-410
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 154
               

               Conread position:
               44-418
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               55-418
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               354, 0
               

               Conread position:
               72-418
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               336, 0
               

               Conread position:
               73-417
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               171-426
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               249, 238
               

               Conread position:
               222-418
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 9
               
Show alignments to all cow chromosomes.