Cow genome map
Conread name: | Ss1.1-Pig3-SRG8012J06.5 |
Conread position: | 1-285 |
Cow position: | chr19:14940756-14941040 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 196 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 118, 123 |
Conread position: | 1-327 |
Cow position: | chr19:23597377-23597702 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 208 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 276, 288 |
Conread position: | 1-331 |
Cow position: | chr19:23614788-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 209 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-332 |
Cow position: | chr19:20678383-20678714 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 118 |
Conread position: | 1-339 |
Cow position: | chr19:20678467-20678802 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 231 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 41, 34 |
Conread position: | 1-342 |
Cow position: | chr19:14959640-14959300 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 225 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 1-344 |
Cow position: | chr19:20635369-20635026 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 232 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 34, 40 |
Conread position: | 1-360 |
Cow position: | chr19:20678299-20678658 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 116 |
Conread position: | 1-369 |
Cow position: | chr19:20635285-20634918 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 342, 287 |
Conread position: | 1-373 |
Cow position: | chr19:23649398-23649770 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 243 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 39, 33 |
Conread position: | 1-411 |
Cow position: | chr19:20635453-20635043 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 27 |
Conread position: | 1-414 |
Cow position: | chr19:23613864-23614278 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 126 |
Conread position: | 1-415 |
Cow position: | chr19:14959230-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 262 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 1-415 |
Cow position: | chr19:20677795-20678208 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 0 |
Conread position: | 1-415 |
Cow position: | chr19:23614536-23614951 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 266 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 155, 128 |
Conread position: | 1-417 |
Cow position: | chr19:14940252-14940667 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 40 |
Conread position: | 1-417 |
Cow position: | chr19:14940588-14941003 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 363 |
Conread position: | 1-417 |
Cow position: | chr19:14960129-14959715 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 273 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 199, 189 |
Conread position: | 1-417 |
Cow position: | chr19:20635537-20635122 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 0 |
Conread position: | 1-417 |
Cow position: | chr19:20677375-20677790 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 260 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 55, 33 |
Conread position: | 1-417 |
Cow position: | chr19:20677459-20677874 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 264 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 93, 97 |
Conread position: | 1-417 |
Cow position: | chr19:20677879-20678294 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 126 |
Conread position: | 1-417 |
Cow position: | chr19:20678215-20678630 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 0 |
Conread position: | 1-417 |
Cow position: | chr19:23613528-23613943 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 0 |
Conread position: | 1-418 |
Cow position: | chr19:14940336-14940752 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 0 |
Conread position: | 1-418 |
Cow position: | chr19:20635621-20635205 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 223 |
Conread position: | 1-418 |
Cow position: | chr19:20677711-20678127 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 207 |
Conread position: | 1-418 |
Cow position: | chr19:20677963-20678379 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 44 |
Conread position: | 1-418 |
Cow position: | chr19:20678047-20678463 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 48 |
Conread position: | 1-418 |
Cow position: | chr19:20678131-20678547 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 368 |
Conread position: | 1-418 |
Cow position: | chr19:23597125-23597541 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 115 |
Conread position: | 1-418 |
Cow position: | chr19:23613360-23613776 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 118 |
Conread position: | 1-418 |
Cow position: | chr19:23613444-23613860 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 34 |
Conread position: | 1-418 |
Cow position: | chr19:23613612-23614028 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 0 |
Conread position: | 1-418 |
Cow position: | chr19:23613696-23614112 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 215 |
Conread position: | 1-418 |
Cow position: | chr19:23614116-23614532 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 267 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 143, 118 |
Conread position: | 1-418 |
Cow position: | chr19:23614200-23614616 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 129 |
Conread position: | 1-418 |
Cow position: | chr19:23614368-23614784 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 383, 373 |
Conread position: | 1-418 |
Cow position: | chr19:23614620-23615036 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 262 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 118, 127 |
Conread position: | 1-418 |
Cow position: | chr19:23649818-23650234 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 266 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 18, 38 |
Conread position: | 1-418 |
Cow position: | chr19:23650070-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 263 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 125, 110 |
Conread position: | 1-418 |
Cow position: | chr19:43570128-43569714 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 394, 0 |
Conread position: | 1-418 |
Cow position: | chr19:43570212-43569796 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 39 |
Conread position: | 1-419 |
Cow position: | chr19:14960295-14959880 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 1-424 |
Cow position: | chr19:23649482-23649905 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 418, 409 |
Conread position: | 1-426 |
Cow position: | chr19:23597209-23597634 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 266 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 419, 409 |
Conread position: | 2-410 |
Cow position: | chr19:14948453-14948046 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 265 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 200, 54 |
Conread position: | 2-418 |
Cow position: | chr19:14915974-14916387 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 262 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 39, 134 |
Conread position: | 2-418 |
Cow position: | chr19:14940421-14940836 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 37 |
Conread position: | 3-418 |
Cow position: | chr19:23597043-23597457 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 406, 0 |
Conread position: | 4-418 |
Cow position: | chr19:14940087-14940500 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 406, 0 |
Conread position: | 5-386 |
Cow position: | chr19:14948367-14947986 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 233 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-411 |
Cow position: | chr19:43570366-43569970 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 260 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 122, 88 |
Conread position: | 6-418 |
Cow position: | chr19:23613953-23614364 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 380, 373 |
Conread position: | 7-372 |
Cow position: | chr19:14960205-14959842 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 346, 45 |
Conread position: | 7-404 |
Cow position: | chr19:14940678-14941075 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 348, 357 |
Conread position: | 7-416 |
Cow position: | chr19:23649908-23650316 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 258 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 26, 31 |
Conread position: | 7-418 |
Cow position: | chr19:14940174-14940584 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 117 |
Conread position: | 7-418 |
Cow position: | chr19:14940510-14940920 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 262 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 350, 361 |
Conread position: | 7-418 |
Cow position: | chr19:23613786-23614196 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 34 |
Conread position: | 7-418 |
Cow position: | chr19:23614710-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 38 |
Conread position: | 7-418 |
Cow position: | chr19:23649740-23650150 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 256 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 201, 191 |
Conread position: | 7-434 |
Cow position: | chr19:14940006-14940431 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 349, 361 |
Conread position: | 10-417 |
Cow position: | chr19:20677303-20677706 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 259 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 107, 58 |
Conread position: | 16-360 |
Cow position: | chr19:20677642-20677986 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 115 |
Conread position: | 16-415 |
Cow position: | chr19:23597308-23597706 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 257 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 340, 356 |
Conread position: | 16-417 |
Cow position: | chr19:23650001-23650401 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 199 |
Conread position: | 16-418 |
Cow position: | chr19:23649665-23650066 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 257 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 394, 0 |
Conread position: | 16-424 |
Cow position: | chr19:23614467-23614875 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 354 |
Conread position: | 23-389 |
Cow position: | chr19:20620553-20620201 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 242 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 10, 20 |
Conread position: | 39-418 |
Cow position: | chr19:20635823-20635457 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 6 |
Conread position: | 47-418 |
Cow position: | chr19:14948492-14948123 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 240 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 247, 90 |
Conread position: | 59-369 |
Cow position: | chr19:43570238-43569928 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 209 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 60, 65 |
Conread position: | 59-417 |
Cow position: | chr19:14960405-14960050 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 236 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 251, 0 |
Conread position: | 59-418 |
Cow position: | chr19:23614090-23614448 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 244 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 142, 150 |
Conread position: | 60-418 |
Cow position: | chr19:20635646-20635289 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 154 |
Conread position: | 61-418 |
Cow position: | chr19:43570394-43570048 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 237 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 61-419 |
Cow position: | chr19:14959254-14958903 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 224 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 74-418 |
Cow position: | chr19:14939987-14940332 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 338 |
Conread position: | 76-417 |
Cow position: | chr19:23613351-23613691 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 226 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 334, 0 |
Conread position: | 76-424 |
Cow position: | chr19:23649389-23649737 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 220 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 76, 42 |
Conread position: | 77-418 |
Cow position: | chr19:20677619-20677959 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 332, 0 |
Conread position: | 84-418 |
Cow position: | chr19:23597040-23597373 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 217 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 326, 0 |
Conread position: | 96-418 |
Cow position: | chr19:14959712-14959393 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 204 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 70, 61 |
Conread position: | 223-418 |
Cow position: | chr19:14960409-14960215 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 186, 0 |
Show alignments to all cow chromosomes.