Cow genome map

Conread name: Ss1.1-Pig3-SRG8012J06.5

Conread position: 1-285
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 118, 123

Conread position: 1-327
Cow position:
Alignm length: 328
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 276, 288

Conread position: 1-331
Cow position:
Alignm length: 331
Alignm identity: 209
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-332
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 118

Conread position: 1-339
Cow position:
Alignm length: 342
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 34

Conread position: 1-342
Cow position:
Alignm length: 342
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 0

Conread position: 1-344
Cow position:
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 40

Conread position: 1-360
Cow position:
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 116

Conread position: 1-369
Cow position:
Alignm length: 371
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 287

Conread position: 1-373
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 39, 33

Conread position: 1-411
Cow position:
Alignm length: 413
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 1-414
Cow position:
Alignm length: 416
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 126

Conread position: 1-415
Cow position:
Alignm length: 415
Alignm identity: 262
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 1-415
Cow position:
Alignm length: 415
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 0

Conread position: 1-415
Cow position:
Alignm length: 418
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 155, 128

Conread position: 1-417
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 1-417
Cow position:
Alignm length: 418
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 363

Conread position: 1-417
Cow position:
Alignm length: 419
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 199, 189

Conread position: 1-417
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 0

Conread position: 1-417
Cow position:
Alignm length: 419
Alignm identity: 260
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 33

Conread position: 1-417
Cow position:
Alignm length: 419
Alignm identity: 264
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 93, 97

Conread position: 1-417
Cow position:
Alignm length: 418
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 126

Conread position: 1-417
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 0

Conread position: 1-417
Cow position:
Alignm length: 417
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 0

Conread position: 1-418
Cow position:
Alignm length: 418
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 0

Conread position: 1-418
Cow position:
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 223

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 207

Conread position: 1-418
Cow position:
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 1-418
Cow position:
Alignm length: 420
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 48

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 368

Conread position: 1-418
Cow position:
Alignm length: 421
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 115

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 118

Conread position: 1-418
Cow position:
Alignm length: 421
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 34

Conread position: 1-418
Cow position:
Alignm length: 418
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 0

Conread position: 1-418
Cow position:
Alignm length: 420
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 215

Conread position: 1-418
Cow position:
Alignm length: 423
Alignm identity: 267
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 118

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 129

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 373

Conread position: 1-418
Cow position:
Alignm length: 420
Alignm identity: 262
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 118, 127

Conread position: 1-418
Cow position:
Alignm length: 421
Alignm identity: 266
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 18, 38

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 110

Conread position: 1-418
Cow position:
Alignm length: 418
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 0

Conread position: 1-418
Cow position:
Alignm length: 421
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 39

Conread position: 1-419
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 1-424
Cow position:
Alignm length: 425
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 409

Conread position: 1-426
Cow position:
Alignm length: 427
Alignm identity: 266
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 419, 409

Conread position: 2-410
Cow position:
Alignm length: 411
Alignm identity: 265
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 200, 54

Conread position: 2-418
Cow position:
Alignm length: 424
Alignm identity: 262
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 134

Conread position: 2-418
Cow position:
Alignm length: 418
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 3-418
Cow position:
Alignm length: 416
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 0

Conread position: 4-418
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 0

Conread position: 5-386
Cow position:
Alignm length: 382
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 5-411
Cow position:
Alignm length: 409
Alignm identity: 260
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 88

Conread position: 6-418
Cow position:
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 373

Conread position: 7-372
Cow position:
Alignm length: 367
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 45

Conread position: 7-404
Cow position:
Alignm length: 399
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 357

Conread position: 7-416
Cow position:
Alignm length: 413
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 31

Conread position: 7-418
Cow position:
Alignm length: 413
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 117

Conread position: 7-418
Cow position:
Alignm length: 413
Alignm identity: 262
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 350, 361

Conread position: 7-418
Cow position:
Alignm length: 413
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 7-418
Cow position:
Alignm length: 413
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 7-418
Cow position:
Alignm length: 414
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 191

Conread position: 7-434
Cow position:
Alignm length: 430
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 361

Conread position: 10-417
Cow position:
Alignm length: 411
Alignm identity: 259
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 107, 58

Conread position: 16-360
Cow position:
Alignm length: 346
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 115

Conread position: 16-415
Cow position:
Alignm length: 401
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 340, 356

Conread position: 16-417
Cow position:
Alignm length: 403
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 199

Conread position: 16-418
Cow position:
Alignm length: 403
Alignm identity: 257
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 394, 0

Conread position: 16-424
Cow position:
Alignm length: 411
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 354

Conread position: 23-389
Cow position:
Alignm length: 372
Alignm identity: 242
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 20

Conread position: 39-418
Cow position:
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 6

Conread position: 47-418
Cow position:
Alignm length: 373
Alignm identity: 240
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 247, 90

Conread position: 59-369
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 65

Conread position: 59-417
Cow position:
Alignm length: 359
Alignm identity: 236
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 251, 0

Conread position: 59-418
Cow position:
Alignm length: 363
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 150

Conread position: 60-418
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 154

Conread position: 61-418
Cow position:
Alignm length: 358
Alignm identity: 237
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 107, 0

Conread position: 61-419
Cow position:
Alignm length: 359
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 74-418
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 338

Conread position: 76-417
Cow position:
Alignm length: 342
Alignm identity: 226
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 334, 0

Conread position: 76-424
Cow position:
Alignm length: 352
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 42

Conread position: 77-418
Cow position:
Alignm length: 342
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 0

Conread position: 84-418
Cow position:
Alignm length: 335
Alignm identity: 217
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 326, 0

Conread position: 96-418
Cow position:
Alignm length: 325
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 61

Conread position: 223-418
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 186, 0

Show alignments to all cow chromosomes.