Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8012J06.5 |
| Conread position: | 1-325 |
| Cow position: | chr2:82800124-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 120 |
| Conread position: | 1-369 |
| Cow position: | chr2:86465444-86465812 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 1-407 |
| Cow position: | chr2:82799620-82800026 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 108, 124 |
| Conread position: | 1-416 |
| Cow position: | chr2:82799536-82799952 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 222 |
| Conread position: | 1-417 |
| Cow position: | chr2:78755596-78756009 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 1-417 |
| Cow position: | chr2:82799788-82800203 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 202, 219 |
| Conread position: | 1-417 |
| Cow position: | chr2:86465612-86466027 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 1-418 |
| Cow position: | chr2:78754842-78755258 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 0 |
| Conread position: | 1-418 |
| Cow position: | chr2:78755010-78755425 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 223 |
| Conread position: | 1-418 |
| Cow position: | chr2:78755762-78756179 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 119, 124 |
| Conread position: | 1-418 |
| Cow position: | chr2:82799872-82800288 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 117, 123 |
| Conread position: | 1-418 |
| Cow position: | chr2:86465192-86465608 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 1-423 |
| Cow position: | chr2:78755930-78756350 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 184 |
| Conread position: | 1-426 |
| Cow position: | chr2:86465864-86466287 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 1-429 |
| Cow position: | chr2:78755262-78755684 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 2-368 |
| Cow position: | chr2:86465109-86465476 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 129, 115 |
| Conread position: | 2-414 |
| Cow position: | chr2:78754927-78755339 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 123 |
| Conread position: | 3-377 |
| Cow position: | chr2:78754440-78754810 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 3-417 |
| Cow position: | chr2:86465698-86466111 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 3-418 |
| Cow position: | chr2:78754109-78754518 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 117, 50 |
| Conread position: | 4-365 |
| Cow position: | chr2:86465279-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 5-368 |
| Cow position: | chr2:86465364-86465727 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 110, 117 |
| Conread position: | 5-434 |
| Cow position: | chr2:78754526-78754937 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 7-408 |
| Cow position: | chr2:82800046-82800447 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-417 |
| Cow position: | chr2:82799458-82799867 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 198, 216 |
| Conread position: | 7-417 |
| Cow position: | chr2:82799962-82800371 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 7-418 |
| Cow position: | chr2:78754278-78754686 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 7-429 |
| Cow position: | chr2:82799710-82800130 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 197, 224 |
| Conread position: | 16-418 |
| Cow position: | chr2:78754203-78754602 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 36-418 |
| Cow position: | chr2:78754792-78755174 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 59-417 |
| Cow position: | chr2:78755736-78756094 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 107, 112 |
| Conread position: | 60-359 |
| Cow position: | chr2:86465083-86465382 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 84-413 |
| Cow position: | chr2:82876496-82876175 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 27 |
Show alignments to all cow chromosomes.