Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8012J06.5 |
| Conread position: | 1-250 |
| Cow position: | chr24:17070804-17071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-270 |
| Cow position: | chr24:17013257-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 1-328 |
| Cow position: | chr24:17070720-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 302, 307 |
| Conread position: | 1-378 |
| Cow position: | chr24:17077832-17077456 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 1-408 |
| Cow position: | chr24:17077916-17077509 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 301, 307 |
| Conread position: | 1-410 |
| Cow position: | chr24:17070636-17071045 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 214 |
| Conread position: | 1-411 |
| Cow position: | chr24:17070552-17070962 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-418 |
| Cow position: | chr24:17035445-17035029 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 117, 123 |
| Conread position: | 1-418 |
| Cow position: | chr24:17035697-17035281 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 1-418 |
| Cow position: | chr24:17035949-17035533 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 1-418 |
| Cow position: | chr24:17036117-17035701 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 123 |
| Conread position: | 1-418 |
| Cow position: | chr24:17036285-17035869 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 108 |
| Conread position: | 1-418 |
| Cow position: | chr24:17036537-17036121 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 1-418 |
| Cow position: | chr24:17070468-17070884 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 370 |
| Conread position: | 1-418 |
| Cow position: | chr24:17078084-17077668 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 409, 0 |
| Conread position: | 4-419 |
| Cow position: | chr24:17070387-17070801 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 7-383 |
| Cow position: | chr24:17013179-17013555 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 7-407 |
| Cow position: | chr24:17035523-17035123 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-417 |
| Cow position: | chr24:17036612-17036206 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 7-418 |
| Cow position: | chr24:17035607-17035197 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 403, 0 |
| Conread position: | 7-418 |
| Cow position: | chr24:17035775-17035365 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 0 |
| Conread position: | 7-418 |
| Cow position: | chr24:17035859-17035449 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 7-418 |
| Cow position: | chr24:17036027-17035617 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 7-418 |
| Cow position: | chr24:17036363-17035953 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 173 |
| Conread position: | 7-424 |
| Cow position: | chr24:17077994-17077577 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-417 |
| Cow position: | chr24:17036188-17035786 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 357 |
| Conread position: | 16-418 |
| Cow position: | chr24:17078153-17077752 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 0 |
| Conread position: | 37-418 |
| Cow position: | chr24:17036417-17036037 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 373, 0 |
| Conread position: | 58-421 |
| Cow position: | chr24:17013146-17013508 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 144, 162 |
| Conread position: | 179-424 |
| Cow position: | chr24:17036608-17036366 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 241, 59 |
Show alignments to all cow chromosomes.