Cow genome map
Conread name: | Ss1.1-Pig3-SRG8012J06.5 |
Conread position: | 1-320 |
Cow position: | chr25:23420560-23420879 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 209 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-369 |
Cow position: | chr25:34714127-34714495 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 230 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 33, 40 |
Conread position: | 1-369 |
Cow position: | chr25:34769611-34769243 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 247 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 57, 62 |
Conread position: | 1-377 |
Cow position: | chr25:34447367-34447741 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 240 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 336, 0 |
Conread position: | 1-404 |
Cow position: | chr25:34447535-34447927 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 260 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 117, 122 |
Conread position: | 1-409 |
Cow position: | chr25:34713875-34714283 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 254 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 32, 41 |
Conread position: | 1-414 |
Cow position: | chr25:34447115-34447527 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 254 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 31, 38 |
Conread position: | 1-414 |
Cow position: | chr25:36800556-36800968 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 251 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 408, 0 |
Conread position: | 1-415 |
Cow position: | chr25:33127811-33128224 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 264 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 116, 121 |
Conread position: | 1-417 |
Cow position: | chr25:33157212-33156797 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 218 |
Conread position: | 1-417 |
Cow position: | chr25:33157296-33156881 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 268 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 300, 307 |
Conread position: | 1-417 |
Cow position: | chr25:33157380-33156965 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 391, 378 |
Conread position: | 1-417 |
Cow position: | chr25:33298656-33299071 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 266 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 30, 45 |
Conread position: | 1-417 |
Cow position: | chr25:33298740-33299155 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 260 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 30, 44 |
Conread position: | 1-417 |
Cow position: | chr25:33298824-33299239 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 270 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 28, 40 |
Conread position: | 1-417 |
Cow position: | chr25:33299076-33299491 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 276 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 30, 40 |
Conread position: | 1-417 |
Cow position: | chr25:33299328-33299743 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 261 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 30, 56 |
Conread position: | 1-417 |
Cow position: | chr25:33299412-33299827 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 271 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 16, 12 |
Conread position: | 1-417 |
Cow position: | chr25:34770031-34769616 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 122 |
Conread position: | 1-417 |
Cow position: | chr25:36800808-36801223 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 262 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 30, 44 |
Conread position: | 1-417 |
Cow position: | chr25:36800892-36801307 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 268 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 30, 41 |
Conread position: | 1-417 |
Cow position: | chr25:36801228-36801631 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 257 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 1-417 |
Cow position: | chr25:36801384-36801799 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 249 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 52, 44 |
Conread position: | 1-417 |
Cow position: | chr25:36801552-36801967 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 262 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 30, 39 |
Conread position: | 1-418 |
Cow position: | chr25:23420392-23420808 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 115 |
Conread position: | 1-418 |
Cow position: | chr25:33299244-33299660 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 271 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 30, 40 |
Conread position: | 1-418 |
Cow position: | chr25:34447283-34447699 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 222 |
Conread position: | 1-418 |
Cow position: | chr25:34769695-34769279 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 151 |
Conread position: | 1-418 |
Cow position: | chr25:34769779-34769363 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 0 |
Conread position: | 1-424 |
Cow position: | chr25:33298572-33298995 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 271 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 115, 129 |
Conread position: | 1-424 |
Cow position: | chr25:34769863-34769440 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 419, 409 |
Conread position: | 1-424 |
Cow position: | chr25:34769947-34769524 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 38 |
Conread position: | 2-360 |
Cow position: | chr25:33306452-33306103 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 225 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 44, 31 |
Conread position: | 2-377 |
Cow position: | chr25:33305225-33304855 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 236 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 29, 39 |
Conread position: | 2-417 |
Cow position: | chr25:33157463-33157049 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 0 |
Conread position: | 5-329 |
Cow position: | chr25:33145111-33145435 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 208 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 31, 41 |
Conread position: | 5-364 |
Cow position: | chr25:22235842-22236202 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 215 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 352, 0 |
Conread position: | 5-416 |
Cow position: | chr25:33298492-33298902 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 264 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 74, 67 |
Conread position: | 5-416 |
Cow position: | chr25:34447035-34447445 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 267 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 44, 57 |
Conread position: | 5-417 |
Cow position: | chr25:33298996-33299407 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 265 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 26, 36 |
Conread position: | 5-418 |
Cow position: | chr25:34770111-34769699 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 35 |
Conread position: | 6-416 |
Cow position: | chr25:34446952-34447363 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 251 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 26, 36 |
Conread position: | 6-418 |
Cow position: | chr25:34447204-34447615 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 218 |
Conread position: | 7-316 |
Cow position: | chr25:34769521-34769213 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 203 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 305, 0 |
Conread position: | 7-346 |
Cow position: | chr25:33157122-33156784 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 332, 0 |
Conread position: | 7-362 |
Cow position: | chr25:36800982-36801337 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 228 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 24, 34 |
Conread position: | 7-384 |
Cow position: | chr25:23420482-23420859 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 248 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 54, 38 |
Conread position: | 7-407 |
Cow position: | chr25:33127733-33128133 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 22 |
Conread position: | 7-417 |
Cow position: | chr25:33144864-33145270 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 258 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 153, 148 |
Conread position: | 7-417 |
Cow position: | chr25:33298914-33299323 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 34 |
Conread position: | 7-417 |
Cow position: | chr25:33305387-33304982 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 263 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 24, 34 |
Conread position: | 7-417 |
Cow position: | chr25:36800730-36801139 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 252 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 111, 121 |
Conread position: | 9-418 |
Cow position: | chr25:33305947-33305545 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 247 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 22, 32 |
Conread position: | 16-338 |
Cow position: | chr25:346472-346794 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 199 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 164, 169 |
Conread position: | 30-377 |
Cow position: | chr25:18642216-18641867 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 225 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 37-418 |
Cow position: | chr25:33157512-33157132 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 238 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 41, 32 |
Conread position: | 55-334 |
Cow position: | chr25:326986-327265 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 184 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 67, 62 |
Conread position: | 55-417 |
Cow position: | chr25:36800526-36800887 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 221 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 108, 101 |
Conread position: | 73-418 |
Cow position: | chr25:23420380-23420724 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 336, 0 |
Conread position: | 73-418 |
Cow position: | chr25:36801372-36801716 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 223 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 93, 98 |
Conread position: | 75-417 |
Cow position: | chr25:33298478-33298819 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 217 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 88, 81 |
Conread position: | 76-399 |
Cow position: | chr25:366725-367048 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 201 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 18, 22 |
Conread position: | 76-417 |
Cow position: | chr25:36801543-36801883 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 213 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 333, 0 |
Conread position: | 77-415 |
Cow position: | chr25:346447-346786 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 208 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 9, 334 |
Conread position: | 77-418 |
Cow position: | chr25:326924-327264 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 223 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 23, 19 |
Conread position: | 93-418 |
Cow position: | chr25:23420316-23420640 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 210 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 317, 0 |
Conread position: | 137-417 |
Cow position: | chr25:366702-366981 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 174 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 272, 0 |
Conread position: | 153-345 |
Cow position: | chr25:34433016-34433205 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 135 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 178-418 |
Cow position: | chr25:34432954-34433193 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 164 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 11, 25 |
Conread position: | 235-418 |
Cow position: | chr25:33127793-33127975 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 126 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 175, 0 |
Show alignments to all cow chromosomes.